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| PROSITE documentation PDOC00023 |
Hemopexin domain signature
Description:
Hemopexin is a serum glycoprotein that binds heme and transports it to the
liver for breakdown and iron recovery, after which the free hemopexin returns
to the circulation. Structurally hemopexin consists of two similar halves of
approximately two hundred amino acid residues connected by a histidine-rich
hinge region. Each half is itself formed by the repetition of a basic unit of
some 35 to 45 residues. Hemopexin-like domains have been found [1,2] in two
other types of proteins:
- In vitronectin, a cell adhesion and spreading factor found in plasma and
tissues. Vitronectin, like hemopexin, has two hemopexin-like domains.
- In most members of the matrix metalloproteinases family (matrixins) (see
<PDOC00129>): MMP-1, MMP-2, MMP-3, MMP-8, MMP-9, MMP-10, MMP-11, MMP-12,
MMP-13, MMP-14, MMP-15, MMP-16, MMP-17, MMP-18, MMP-19, MMP-20, MMP-24,
and MMP-25. These zinc endoproteases have a single hemopexin-like domain in
their C-terminal section.
It is suggested that the hemopexin domain facilitates binding to a variety of
molecules and proteins. The signature pattern for this type of domain has been
derived from the best conserved region which is located at the beginning of
the second repeat.
Last update:
April 2006 / Pattern revised.
Technical section:
PROSITE method (with tools and information) covered by this documentation:
| HEMOPEXIN, PS00024; Hemopexin domain signature (PATTERN) |
| Consensus pattern: |
[LIFAT]-{IL}-x(2)-W-x(2,3)-[PE]-x-{VF}-[LIVMFY]-[DENQS]-[STA]-[AV]-[LIVMFY]
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| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
11 |
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| Matching PDB structures:
1CK7 1FBL 1GEN 1GXD ... [ALL] |
References:
| 1 |
Authors | Hunt L.T., Barker W.C., Chen H.R. |
| Source | Protein Seq. Data Anal. 1:21-26(1987). |
| 2 |
Authors | Stanley K.K. |
| Title | Homology with hemopexin suggests a possible scavenging function for S-protein/vitronectin. |
| Source | FEBS Lett. 199:249-253(1986). |
| PubMed ID | 2422056 |
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