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| PROSITE documentation PDOC00098 |
Aminotransferases class-I pyridoxal-phosphate attachment site
Description:
Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity,
these various enzymes can be grouped [1,2] into subfamilies. One of these,
called class-I, currently consists of the following enzymes:
- Aspartate aminotransferase (AAT) (EC 2.6.1.1). AAT catalyzes the reversible
transfer of the amino group from L-aspartate to 2-oxoglutarate to form
oxaloacetate and L-glutamate. In eukaryotes, there are two AAT isozymes:
one is located in the mitochondrial matrix, the second is cytoplasmic. In
prokaryotes, only one form of AAT is found (gene aspC).
- Tyrosine aminotransferase (EC 2.6.1.5) which catalyzes the first step in
tyrosine catabolism by reversibly transferring its amino group to 2-
oxoglutarate to form 4-hydroxyphenylpyruvate and L-glutamate.
- Aromatic aminotransferase (EC 2.6.1.57) involved in the synthesis of Phe,
Tyr, Asp and Leu (gene tyrB).
- 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase)
from plants. ACC synthase catalyzes the first step in ethylene
biosynthesis.
- Pseudomonas denitrificans cobC, which is involved in cobalamin
biosynthesis.
- Yeast hypothetical protein YJL060w.
The sequence around the pyridoxal-phosphate attachment site of this class of
enzyme is sufficiently conserved to allow the creation of a specific pattern.
Last update:
April 2006 / Pattern revised.
Technical section:
PROSITE method (with tools and information) covered by this documentation:
| AA_TRANSFER_CLASS_1, PS00105; Aminotransferases class-I pyridoxal-phosphate attachment site (PATTERN) |
| Consensus pattern: |
[GS]-[LIVMFYTAC]-[GSTA]-K-x(2)-[GSALVN]-[LIVMFA]-x-[GNAR]-{V}-R-[LIVMA]-[GA]
K is the pyridoxal-P attachment site |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
1 |
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| Matching PDB structures:
1AAM 1AAT 1AAW 1AHE ... [ALL] |
References:
| 1 |
Authors | Bairoch A. |
| Source | Unpublished observations (1992). |
| 2 |
Authors | Sung M.H., Tanizawa K., Tanaka H., Kuramitsu S., Kagamiyama H., Hirotsu K., Okamoto A., Higuchi T., Soda K. |
| Title | Thermostable aspartate aminotransferase from a thermophilic Bacillus species. Gene cloning, sequence determination, and preliminary x-ray characterization. |
| Source | J. Biol. Chem. 266:2567-2572(1991). |
| PubMed ID | 1990006 |
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