PROSITE documentation PDOC00101

Pyruvate kinase active site signature

Description

Pyruvate kinase (EC 2.7.1.40) (PK) [1] catalyzes the final step in glycolysis, the conversion of phosphoenolpyruvate to pyruvate with the concomitant phosphorylation of ADP to ATP. PK requires both magnesium and potassium ions for its activity. PK is found in all living organisms. In vertebrates there are four, tissues specific, isozymes: L (liver), R (red cells), M1 (muscle, heart, and brain), and M2 (early fetal tissues). In Escherichia coli there are two isozymes: PK-I (gene pykF) and PK-II (gene pykA). All PK isozymes seem to be tetramers of identical subunits of about 500 amino acid residues.

As a signature pattern for PK we selected a conserved region that includes a lysine residue which seems to be the acid/base catalyst responsible for the interconversion of pyruvate and enolpyruvate, and a glutamic acid residue implicated in the binding of the magnesium ion.

Last update:

July 1999 / Pattern and text revised.

Technical section

PROSITE method (with tools and information) covered by this documentation:

PYRUVATE_KINASE, PS00110Pyruvate kinase active site signature  (PATTERN)
Consensus pattern: [LIVAC]-x-[LIVM](2)-[SAPCV]-K-[LIV]-E-[NKRST]-x-[DEQHS]-[GSTA]-[LIVM]
K is the active site residue; E is a magnesium ligand
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: 2
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00110
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00110
Scan Swiss-Prot/TrEMBL entries against PS00110
view ligand binding statistics
Matching PDB structures: 1A3W 1A3X 1A49 1A5U ... [ALL]

Reference

1 Authors Muirhead H.
Title Isoenzymes of pyruvate kinase.
Source Biochem. Soc. Trans. 18:193-196(1990).
PubMed ID 2379684

Copyright

PROSITE is copyright. It is produced by the SIB Swiss Institute Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to
Prosite License or see: prosite_license.html.

Miscellaneous

View entry in original PROSITE document format
View entry in raw text format (no links)