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| PROSITE documentation PDOC00149 |
Serine/threonine dehydratases pyridoxal-phosphate attachment site
Description
Serine and threonine dehydratases [1,2] are functionally and structurally
related pyridoxal-phosphate dependent enzymes:
- L-serine dehydratase (EC 4.3.1.17) and D-serine dehydratase (EC 4.3.1.18)
catalyze the dehydratation of L-serine (respectively D-serine) into ammonia
and pyruvate.
- Threonine dehydratase (EC 4.3.1.19) (TDH) catalyzes the dehydratation of
threonine into α-ketobutarate and ammonia. In Escherichia coli and
other microorganisms, two classes of TDH are known to exist. One is
involved in the biosynthesis of isoleucine, the other in hydroxamino acid
catabolism.
Threonine synthase (EC 4.2.3.1) is also a pyridoxal-phosphate enzyme, it
catalyzes the transformation of homoserine-phosphate into threonine. It has
been shown [3] that threonine synthase is distantly related to the serine/
threonine dehydratases.
In all these enzymes, the pyridoxal-phosphate group is attached to a lysine
residue. The sequence around this residue is sufficiently conserved to allow
the derivation of a pattern specific to serine/threonine dehydratases and
threonine synthases.
Some bacterial L-serine dehydratases - such as those from Escherichia
coli - are iron-sulfur proteins [4] and do not belong to this family.
December 2004 / Pattern and text revised.
Technical section
PROSITE method (with tools and information) covered by this documentation:
| DEHYDRATASE_SER_THR, PS00165; Serine/threonine dehydratases pyridoxal-phosphate attachment site (PATTERN) |
| Consensus pattern: |
[DESH]-x(4,5)-[STVG]-{EVKD}-[AS]-[FYI]-K-[DLIFSA]-[RLVMF]-[GA]-[LIVMGA]
The K is the pyridoxal-P attachment site |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
17. |
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| Matching PDB structures:
1KL7 1P5J 1PWE 1PWH ... [ALL] |
References
| 1 |
Authors |
Ogawa H., Gomi T., Konishi K., Date T., Nakashima H., Nose K., Matsuda Y., Peraino C., Pitot H.C., Fujioka M. |
| Title |
Human liver serine dehydratase. cDNA cloning and sequence homology with hydroxyamino acid dehydratases from other sources. |
| Source |
J. Biol. Chem. 264:15818-15823(1989). |
| PubMed ID |
2674117 |
| 2 |
Authors |
Datta P., Goss T.J., Omnaas J.R., Patil R.V. |
| Title |
Covalent structure of biodegradative threonine dehydratase of Escherichia coli: homology with other dehydratases. |
| Source |
Proc. Natl. Acad. Sci. U.S.A. 84:393-397(1987). |
| PubMed ID |
3540965 |
| 3 |
Authors |
Parsot C. |
| Title |
Evolution of biosynthetic pathways: a common ancestor for threonine synthase, threonine dehydratase and D-serine dehydratase. |
| Source |
EMBO J. 5:3013-3019(1986). |
| PubMed ID |
3098560 |
| 4 |
Authors |
Grabowski R., Hofmeister A.E.M., Buckel W. |
| Title |
Bacterial L-serine dehydratases: a new family of enzymes containing iron-sulfur clusters. |
| Source |
Trends Biochem. Sci. 18:297-300(1993). |
| PubMed ID |
8236444 |
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