{PDOC00532} {PS00609; GLYCOSYL_HYDROL_F32} {BEGIN} ********************************************* * Glycosyl hydrolases family 32 active site * ********************************************* It has been shown [1,2] that the following glycosyl hydrolases can be classified into a single family on the basis of sequence similarities: - Inulinase (EC 3.2.1.7) (or inulase) from the fungi Kluyveromyces marxianus. - Beta-fructofuranosidase (EC 3.2.1.26), commonly known as invertase in fungi and plants and as sucrase in bacteria (gene sacA or scrB). - Raffinose invertase (EC 3.2.1.26) (gene rafD) from Escherichia coli plasmid pRSD2. - Levanase (EC 3.2.1.65) (gene sacC) from Bacillus subtilis. One of the conserved regions in these enzymes is located in the N-terminal section and contains an aspartic acid residue which has been shown [3], in yeast invertase to be important for the catalytic mechanism. We have used this region as a signature pattern. -Consensus pattern: H-x(2)-[PV]-x(4)-[LIVMA]-N-D-P-N-[GA] [D is the active site residue] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Expert(s) to contact by email: Henrissat B.; bernie@afmb.cnrs-mrs.fr -Last update: April 2006 / Pattern revised. [ 1] Henrissat B. "A classification of glycosyl hydrolases based on amino acid sequence similarities." Biochem. J. 280:309-316(1991). PubMed=1747104 [ 2] Gunasekaran P., Karunakaran T., Cami B., Mukundan A.G., Preziosi L., Baratti J. "Cloning and sequencing of the sacA gene: characterization of a sucrase from Zymomonas mobilis." J. Bacteriol. 172:6727-6735(1990). PubMed=2254250 [ 3] Reddy V.A., Maley F. "Identification of an active-site residue in yeast invertase by affinity labeling and site-directed mutagenesis." J. Biol. Chem. 265:10817-10820(1990). PubMed=2113524 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}