{PDOC00640} {PS00812; GLYCOSYL_HYDROL_F8} {BEGIN} ****************************************** * Glycosyl hydrolases family 8 signature * ****************************************** The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (EC 3.2.1.4), cellobiohydrolases (EC 3.2.1.91) (exoglucanases), or xylanases (EC 3.2.1.8) [1,2]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family D [3] or as the glycosyl hydrolases family 8 [4,E1]. The enzymes which are currently known to belong to this family are listed below. - Acetobacter xylinum endonuclease cmcAX. - Bacillus strain KSM-330 acidic endonuclease K (Endo-K). - Cellulomonas josui endoglucanase 2 (celB). - Cellulomonas uda endoglucanase. - Clostridium cellulolyticum endoglucanases C (celcCC). - Clostridium thermocellum endoglucanases A (celA). - Erwinia chrysanthemi minor endoglucanase y (celY). - Bacillus circulans beta-glucanase (EC 3.2.1.73). - Escherichia coli hypothetical protein yhjM. The most conserved region in these enzymes is a stretch of about 20 residues that contains two conserved aspartate. The first asparatate is thought [5] to act as the nucleophile in the catalytic mechanism. We have used this region as a signature pattern. -Consensus pattern: A-[ST]-D-[AG]-D-x(2)-[IM]-A-x-[SA]-[LIVM]-[LIVMG]-x-A- x(3)-[FW] [The first D is an active site residue] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Expert(s) to contact by email: Henrissat B.; bernie@afmb.cnrs-mrs.fr -Last update: November 1997 / Text revised. [ 1] Beguin P. "Molecular biology of cellulose degradation." Annu. Rev. Microbiol. 44:219-248(1990). PubMed=2252383; DOI=10.1146/annurev.mi.44.100190.001251 [ 2] Gilkes N.R., Henrissat B., Kilburn D.G., Miller R.C. Jr., Warren R.A.J. "Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families." Microbiol. Rev. 55:303-315(1991). PubMed=1886523 [ 3] Henrissat B., Claeyssens M., Tomme P., Lemesle L., Mornon J.-P. "Cellulase families revealed by hydrophobic cluster analysis." Gene 81:83-95(1989). PubMed=2806912 [ 4] Henrissat B. "A classification of glycosyl hydrolases based on amino acid sequence similarities." Biochem. J. 280:309-316(1991). PubMed=1747104 [ 5] Alzari P.M., Souchon H., Dominguez R. "The crystal structure of endoglucanase CelA, a family 8 glycosyl hydrolase from Clostridium thermocellum." Structure 4:265-275(1996). PubMed=8805535 [E1] https://www.uniprot.org/docs/glycosid -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}