 |
|
| PROSITE documentation PDOC00654 |
Alanine dehydrogenase and pyridine nucleotide transhydrogenase signatures
Description:
The following dehydrogenases have been shown [1] to share regions of
similarity:
- Alanine dehydrogenase (EC 1.4.1.1), an enzyme which catalyzes the NAD-
dependent reversible reductive amination of pyruvate into alanine.
- Pyridine nucleotide transhydrogenase (EC 1.6.1.1), which is the enzyme that
catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of
NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes
and in the inner membrane of the mitochondria of eukaryotes. The
transhydrogenation between NADH and NADP is coupled with the translocation
of a proton across the membrane. In prokaryotes the enzyme is composed of
two different subunits: an α chain (gene pntA) and a β chain (gene
pntB) while in eukaryotes it is a single chain protein.
The sequence of alanine dehydrogenase from several bacterial species are
related with those of the α subunit of bacterial pyridine nucleotide
transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two
most conserved regions correspond respectively to the N-terminal extremity of
these proteins and to a central glycine-rich region which is part of the
NAD(H)-binding site. We have developed signature patterns for both regions.
Last update:
April 2006 / Patterns revised.
Technical section:
PROSITE methods (with tools and information) covered by this documentation:
| ALADH_PNT_1, PS00836; Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1 (PATTERN) |
| Consensus pattern: |
[GA]-[LIVM]-[PKV]-x(0,1)-E-x(3)-[NG]-E-x(1,3)-R-[VT]-[AG]-x-[ST]-P-x-[GSTVN]-[VA]-x(2)-[LI]-x-[KRHNGSED]-x-G
|
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE. |
|
|
|
| Matching PDB structures:
1F8G 1HZZ 1L7D 1L7E ... [ALL] |
| ALADH_PNT_2, PS00837; Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2 (PATTERN) |
| Consensus pattern: |
[LIVM]-[LIVMF]-G-[GAV]-G-x-[AV]-[GA]-x(2)-[SA]-x(3)-[GA]-x-[SGR]-[LIVM]-[GN]-A-x-V-x(3)-[DE]
|
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE. |
|
|
|
| Matching PDB structures:
1F8G 1HZZ 1L7D 1L7E ... [ALL] |
Reference:
| 1 |
Authors | Delforge D., Depiereux E., De Bolle X., Feytmans E., Remacle J. |
| Title | Similarities between alanine dehydrogenase and the N-terminal part of pyridine nucleotide transhydrogenase and their possible implication in the virulence mechanism of Mycobacterium tuberculosis. |
| Source | Biochem. Biophys. Res. Commun. 190:1073-1079(1993). |
| PubMed ID | 8439307 |
Copyright:
PROSITE is copyright. It is produced by the Swiss Institute of
Bioinformatics (SIB). There are no restrictions on its use by non-profit
institutions as long as its content is in no way modified. Usage by and
for commercial entities requires a license agreement. For information
about the licensing scheme send an email to license@isb-sib.ch or
see: http://www.expasy.org/prosite/prosite_license.htm.
Miscellaneous:
View entry in original PROSITE document format
View entry in raw text format (no links)