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| PROSITE documentation PDOC00677 |
Cys/Met metabolism enzymes pyridoxal-phosphate attachment site
Description:
A number of pyridoxal-dependent enzymes involved in the metabolism of
cysteine, homocysteine and methionine have been shown [1,2] to be evolutionary
related. These are:
- Cystathionine γ-lyase (EC 4.4.1.1) (γ-cystathionase), which
catalyzes the transformation of cystathionine into cysteine, oxobutanoate
and ammonia. This is the final reaction in the transulfuration pathway that
leads from methionine to cysteine in eukaryotes.
- Cystathionine γ-synthase (EC 2.5.1.48), which catalyzes the conversion
of cysteine and succinyl-homoserine into cystathionine and succinate: the
first step in the biosynthesis of methionine from cysteine in bacteria
(gene metB).
- Cystathionine β-lyase (EC 4.4.1.8) (β-cystathionase), which catalyzes
the conversion of cystathionine into homocysteine, pyruvate and ammonia:
the second step in the biosynthesis of methionine from cysteine in bacteria
(gene metC).
- Methionine γ-lyase (EC 4.4.1.11) (L-methioninase) which catalyzes the
transformation of methionine into methanethiol, oxobutanoate and ammonia.
- OAH/OAS sulfhydrylase, which catalyzes the conversion of acetylhomoserine
into homocysteine and that of acetylserine into cysteine (gene MET17 or
MET25 in yeast).
- O-succinylhomoserine sulfhydrylase (EC 4.2.99.-).
- Yeast hypothetical protein YGL184c.
- Yeast hypothetical protein YHR112c.
These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P
group is attached to a lysine residue located in the central section of these
enzymes; the sequence around this residue is highly conserved and can be used
as a signature pattern to detect this class of enzymes.
Last update:
December 2004 / Pattern and text revised.
Technical section:
PROSITE method (with tools and information) covered by this documentation:
| CYS_MET_METAB_PP, PS00868; Cys/Met metabolism enzymes pyridoxal-phosphate attachment site (PATTERN) |
| Consensus pattern: |
[DQ]-[LIVMFY]-x(3)-[STAGCN]-[STAGCIL]-T-K-[FYWQI]-[LIVMF]-x-G-[HQD]-[SGNH]
K is the pyridoxal-P attachment site |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE |
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| Matching PDB structures:
1CL2 1IBJ 1N8P 1PG8 ... [ALL] |
References:
| 1 |
Authors | Ono B.I., Tanaka K., Naito K., Heike C., Shinoda S., Yamamoto S., Ohmori S., Oshima T., Toh-E A. |
| Title | Cloning and characterization of the CYS3 (CYI1) gene of Saccharomyces cerevisiae. |
| Source | J. Bacteriol. 174:3339-3347(1992). |
| PubMed ID | 1577698 |
| 2 |
Authors | Barton A.B., Kaback D.B., Clark M.W., Keng T., Ouellette B.F.F., Storms R.K., Zeng B., Zhong W.W., Fortin N., Delaney S., Bussey H. |
| Title | Physical localization of yeast CYS3, a gene whose product resembles the rat gamma-cystathionase and Escherichia coli cystathionine gamma-synthase enzymes. |
| Source | Yeast 9:363-369(1993). |
| PubMed ID | 8511966 |
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