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PROSITE documentation PDOC00730

Ribosomal protein S7e signature

Description:

A number of eukaryotic ribosomal proteins can be grouped on the basis of sequence similarities [1]. One of these families consists of:

  • Mammalian S7.
  • Xenopus S8.
  • Insect S7.
  • Yeast probable ribosomal protein S7 (N2212).
  • Fission yeast probable ribosomal protein S7 (SpAC18G6.13c).

These proteins have about 200 amino acids. As a signature pattern we selected a highly conserved stretch of 14 residues which is located in the central section and which is rich in charged residues.

Last update:

December 2004 / Pattern and text revised.

Technical section:

PROSITE method (with tools and information) covered by this documentation:

RIBOSOMAL_S7E, PS00948; Ribosomal protein S7e signature  (PATTERN)
Consensus pattern: [KRAI]-L-x-R-E-L-E-K-K-F-[SAPQG]-x-[KRN]-[HED]
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
• Retrieve the sequence logo from the alignment
• Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00948
• Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00948
• Scan Swiss-Prot/TrEMBL entries against PS00948
• view ligand binding statistics

Reference:

1 AuthorsSalazar C.E., Mills-Hamm D.M., Kumar V., Collins F.H.
TitleSequence of a cDNA from the mosquito Anopheles gambiae encoding a homologue of human ribosomal protein S7.
SourceNucleic Acids Res. 21:4147-4147(1993).
PubMed ID8371989

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