Entry: PS00024

Forthcoming changes to the profile format
General information about the entry

Entry name [info] HEMOPEXIN
Accession [info] PS00024
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00023

Name and characterization of the entry

Description [info] Hemopexin domain signature.
Pattern [info]
[LIFAT]-{IL}-x(2)-W-x(2,3)-[PE]-x-{VF}-[LIVMFY]-[DENQS]-[STA]-[AV]-
[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 130 in 123 different sequences
Number of true positive hits 82 in 75 different sequences
Number of 'unknown' hits
Number of false positive hits 48 in 48 different sequences
Number of false negative sequences 20
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 63.08 %
Recall (true positives / (true positives + false negatives)) 80.39 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
75 sequences

HEMO_BOVIN  (Q3SZV7), HEMO_HUMAN  (P02790), HEMO_MOUSE  (Q91X72), 
HEMO_PIG    (P50828), HEMO_PONAB  (Q5R543), HEMO_RABIT  (P20058), 
HEMO_RAT    (P20059), HE_HEMPU    (P91953), MMP10_HUMAN (P09238), 
MMP10_MOUSE (O55123), MMP10_RAT   (P07152), MMP11_HUMAN (P24347), 
MMP11_MOUSE (Q02853), MMP11_RAT   (Q499S5), MMP11_XENLA (Q11005), 
MMP12_HUMAN (P39900), MMP12_MOUSE (P34960), MMP12_RABIT (P79227), 
MMP12_RAT   (Q63341), MMP13_HORSE (O18927), MMP13_HUMAN (P45452), 
MMP13_MOUSE (P33435), MMP13_RABIT (O62806), MMP13_RAT   (P23097), 
MMP13_XENLA (Q10835), MMP14_BOVIN (Q9GLE4), MMP14_HUMAN (P50281), 
MMP14_MOUSE (P53690), MMP14_PIG   (Q9XT90), MMP14_PONAB (Q5RES1), 
MMP14_RABIT (Q95220), MMP14_RAT   (Q10739), MMP15_HUMAN (P51511), 
MMP15_MOUSE (O54732), MMP16_HUMAN (P51512), MMP16_MOUSE (Q9WTR0), 
MMP16_RAT   (O35548), MMP19_MOUSE (Q9JHI0), MMP1A_MOUSE (Q9EPL5), 
MMP1B_MOUSE (Q9EPL6), MMP1_BOVIN  (P28053), MMP1_HORSE  (Q9XSZ5), 
MMP1_HUMAN  (P03956), MMP1_PIG    (P21692), MMP1_RABIT  (P13943), 
MMP24_HUMAN (Q9Y5R2), MMP24_MOUSE (Q9R0S2), MMP24_RAT   (Q99PW6), 
MMP27_HUMAN (Q9H306), MMP27_TUPBE (Q9GKE1), MMP2_BOVIN  (Q9GLE5), 
MMP2_CHICK  (Q90611), MMP2_HUMAN  (P08253), MMP2_MOUSE  (P33434), 
MMP2_RABIT  (P50757), MMP2_RAT    (P33436), MMP3_CANFA  (Q6Y4Q5), 
MMP3_HORSE  (Q28397), MMP3_HUMAN  (P08254), MMP3_MOUSE  (P28862), 
MMP3_RABIT  (P28863), MMP3_RAT    (P03957), MMP8_HUMAN  (P22894), 
MMP8_MOUSE  (O70138), MMP8_RAT    (O88766), MMP9_HUMAN  (P14780), 
MMP9_MOUSE  (P41245), MMP9_RABIT  (P41246), MMP9_RAT    (P50282), 
PRG4_HUMAN  (Q92954), PRG4_MOUSE  (Q9JM99), VTNC_HUMAN  (P04004), 
VTNC_MOUSE  (P29788), VTNC_PIG    (P48819), VTNC_RABIT  (P22458)
» More

UniProtKB/Swiss-Prot
False negative sequences
20 sequences

HE_PARLI    (P22757), MMP13_BOVIN (O77656), MMP17_HUMAN (Q9ULZ9), 
MMP17_MOUSE (Q9R0S3), MMP18_XENLA (O13065), MMP19_HUMAN (Q99542), 
MMP1_LITCT  (Q11133), MMP20_BOVIN (O18767), MMP20_HUMAN (O60882), 
MMP20_MOUSE (P57748), MMP20_PIG   (P79287), MMP21_CYNPY (Q90YC2), 
MMP21_HUMAN (Q8N119), MMP21_MOUSE (Q8K3F2), MMP21_XENLA (O93470), 
MMP25_HUMAN (Q9NPA2), MMP25_MOUSE (Q3U435), MMP28_HUMAN (Q9H239), 
MMP9_BOVIN  (P52176), MMP9_CANFA  (O18733)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

HEMO_CHICK  (P20057)

		
UniProtKB/Swiss-Prot
False positive sequences
48 sequences

ASTE_BURXL  (Q141D1), BPHA4_RHOJR (Q0S032), CE042_MOUSE (Q8CE72), 
DPP6_PANTR  (Q5IS50), GC_PSHV1    (Q6UDI7), HISX_PROMM  (Q7V5N9), 
KATG_MYCGI  (A4TA35), LGRC_BREPA  (Q70LM5), LTD_ORYSI   (A2YLX7), 
LTD_ORYSJ   (A3BKF2), MPPE1_AILME (D2I2M6), MPPE1_CHICK (Q5ZK82), 
MPPE1_CRIGR (C7G3A0), MPPE1_HUMAN (Q53F39), MPPE1_MACFA (Q9GMS6), 
MPPE1_MOUSE (Q80XL7), MPPE1_PONAB (Q5RET5), MPPE1_RAT   (B1WC86), 
MPPE1_XENLA (Q0IHA5), MSLN_HUMAN  (Q13421), NIFJ_ECOLI  (P52647), 
OPGG2_SHEON (Q8EDL2), PORCN_CAEBR (A8WZ09), STEA4_HUMAN (Q687X5), 
STEA4_MOUSE (Q923B6), SYE1_SPHWW  (A5V932), SYT_HAEDU   (Q7VKR9), 
TFE_METTP   (A0B9P3), TMCA_CITK8  (A8ADB3), TRAK1_HUMAN (Q9UPV9), 
TRAK1_MOUSE (Q6PD31), UBID_BURCA  (Q1BYC0), UBID_BURL3  (Q39IR6), 
UBID_BURMA  (Q62HU9), UBID_BURP1  (Q3JPM4), UBID_BURPS  (Q63RP1), 
UBID_BURTA  (Q2SYC8), UBID_METCA  (Q602K0), UBID_NITEU  (Q82TP1), 
UBID_THIDA  (Q3SMI8), URE1_ACIAD  (Q6FD83), URE1_CORGL  (Q79VJ3), 
UTP20_SCHPO (O60055), Y022_ALKMQ  (A6TJ97), Y1488_MYCTO (P9WPR8), 
Y1488_MYCTU (P9WPR9), Y1524_MYCBO (P63694), Y3298_MAGSM (A0LCU4)
» More


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission