Entry: PS00024

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General information about the entry

Entry name [info] HEMOPEXIN
Accession [info] PS00024
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00023

Name and characterization of the entry

Description [info] Hemopexin domain signature.
Pattern [info]
[LIFAT]-{IL}-x(2)-W-x(2,3)-[PE]-x-{VF}-[LIVMFY]-[DENQS]-[STA]-[AV]-
[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 129 in 122 different sequences
Number of true positive hits 82 in 75 different sequences
Number of 'unknown' hits
Number of false positive hits 47 in 47 different sequences
Number of false negative sequences 20
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 63.57 %
Recall (true positives / (true positives + false negatives)) 80.39 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
75 sequences

HEMO_BOVIN  (Q3SZV7), HEMO_HUMAN  (P02790), HEMO_MOUSE  (Q91X72), 
HEMO_PIG    (P50828), HEMO_PONAB  (Q5R543), HEMO_RABIT  (P20058), 
HEMO_RAT    (P20059), HE_HEMPU    (P91953), MMP10_HUMAN (P09238), 
MMP10_MOUSE (O55123), MMP10_RAT   (P07152), MMP11_HUMAN (P24347), 
MMP11_MOUSE (Q02853), MMP11_RAT   (Q499S5), MMP11_XENLA (Q11005), 
MMP12_HUMAN (P39900), MMP12_MOUSE (P34960), MMP12_RABIT (P79227), 
MMP12_RAT   (Q63341), MMP13_HORSE (O18927), MMP13_HUMAN (P45452), 
MMP13_MOUSE (P33435), MMP13_RABIT (O62806), MMP13_RAT   (P23097), 
MMP13_XENLA (Q10835), MMP14_BOVIN (Q9GLE4), MMP14_HUMAN (P50281), 
MMP14_MOUSE (P53690), MMP14_PIG   (Q9XT90), MMP14_PONAB (Q5RES1), 
MMP14_RABIT (Q95220), MMP14_RAT   (Q10739), MMP15_HUMAN (P51511), 
MMP15_MOUSE (O54732), MMP16_HUMAN (P51512), MMP16_MOUSE (Q9WTR0), 
MMP16_RAT   (O35548), MMP19_MOUSE (Q9JHI0), MMP1A_MOUSE (Q9EPL5), 
MMP1B_MOUSE (Q9EPL6), MMP1_BOVIN  (P28053), MMP1_HORSE  (Q9XSZ5), 
MMP1_HUMAN  (P03956), MMP1_PIG    (P21692), MMP1_RABIT  (P13943), 
MMP24_HUMAN (Q9Y5R2), MMP24_MOUSE (Q9R0S2), MMP24_RAT   (Q99PW6), 
MMP27_HUMAN (Q9H306), MMP27_TUPBE (Q9GKE1), MMP2_BOVIN  (Q9GLE5), 
MMP2_CHICK  (Q90611), MMP2_HUMAN  (P08253), MMP2_MOUSE  (P33434), 
MMP2_RABIT  (P50757), MMP2_RAT    (P33436), MMP3_CANFA  (Q6Y4Q5), 
MMP3_HORSE  (Q28397), MMP3_HUMAN  (P08254), MMP3_MOUSE  (P28862), 
MMP3_RABIT  (P28863), MMP3_RAT    (P03957), MMP8_HUMAN  (P22894), 
MMP8_MOUSE  (O70138), MMP8_RAT    (O88766), MMP9_HUMAN  (P14780), 
MMP9_MOUSE  (P41245), MMP9_RABIT  (P41246), MMP9_RAT    (P50282), 
PRG4_HUMAN  (Q92954), PRG4_MOUSE  (Q9JM99), VTNC_HUMAN  (P04004), 
VTNC_MOUSE  (P29788), VTNC_PIG    (P48819), VTNC_RABIT  (P22458)
» More

UniProtKB/Swiss-Prot
False negative sequences
20 sequences

HE_PARLI    (P22757), MMP13_BOVIN (O77656), MMP17_HUMAN (Q9ULZ9), 
MMP17_MOUSE (Q9R0S3), MMP18_XENLA (O13065), MMP19_HUMAN (Q99542), 
MMP1_LITCT  (Q11133), MMP20_BOVIN (O18767), MMP20_HUMAN (O60882), 
MMP20_MOUSE (P57748), MMP20_PIG   (P79287), MMP21_CYNPY (Q90YC2), 
MMP21_HUMAN (Q8N119), MMP21_MOUSE (Q8K3F2), MMP21_XENLA (O93470), 
MMP25_HUMAN (Q9NPA2), MMP25_MOUSE (Q3U435), MMP28_HUMAN (Q9H239), 
MMP9_BOVIN  (P52176), MMP9_CANFA  (O18733)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

HEMO_CHICK  (P20057)

		
UniProtKB/Swiss-Prot
False positive sequences
47 sequences

ASTE_BURXL  (Q141D1), CE042_MOUSE (Q8CE72), DPP6_PANTR  (Q5IS50), 
GC_PSHV1    (Q6UDI7), HISX_PROMM  (Q7V5N9), KATG_MYCGI  (A4TA35), 
LGRC_BREPA  (Q70LM5), LTD_ORYSI   (A2YLX7), LTD_ORYSJ   (A3BKF2), 
MPPE1_AILME (D2I2M6), MPPE1_CHICK (Q5ZK82), MPPE1_CRIGR (C7G3A0), 
MPPE1_HUMAN (Q53F39), MPPE1_MACFA (Q9GMS6), MPPE1_MOUSE (Q80XL7), 
MPPE1_PONAB (Q5RET5), MPPE1_RAT   (B1WC86), MPPE1_XENLA (Q0IHA5), 
MSLN_HUMAN  (Q13421), NIFJ_ECOLI  (P52647), OPGG2_SHEON (Q8EDL2), 
PORCN_CAEBR (A8WZ09), STEA4_HUMAN (Q687X5), STEA4_MOUSE (Q923B6), 
SYE1_SPHWW  (A5V932), SYT_HAEDU   (Q7VKR9), TFE_METTP   (A0B9P3), 
TMCA_CITK8  (A8ADB3), TRAK1_HUMAN (Q9UPV9), TRAK1_MOUSE (Q6PD31), 
UBID_BURCA  (Q1BYC0), UBID_BURMA  (Q62HU9), UBID_BURP1  (Q3JPM4), 
UBID_BURPS  (Q63RP1), UBID_BURS3  (Q39IR6), UBID_BURTA  (Q2SYC8), 
UBID_METCA  (Q602K0), UBID_NITEU  (Q82TP1), UBID_THIDA  (Q3SMI8), 
URE1_ACIAD  (Q6FD83), URE1_CORGL  (Q79VJ3), UTP20_SCHPO (O60055), 
Y022_ALKMQ  (A6TJ97), Y1488_MYCTO (P9WPR8), Y1488_MYCTU (P9WPR9), 
Y1524_MYCBO (P63694), Y3298_MAGSM (A0LCU4)
» More

PDB
[Detailed view]
19 PDB

1CK7; 1FBL; 1GEN; 1GXD; 1HXN; 1ITV; 1PEX; 1QHU; 1QJS; 1RTG; 1SU3; 2CLT; 2JXY; 3BA0; 3C7X; 4AUO; 4FU4; 4FVL; 4G0D
» More

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