Entry: PS00048

General information about the entry

Entry name [info] PROTAMINE_P1
Accession [info] PS00048
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00047

Name and characterization of the entry

Description [info] Protamine P1 signature.
Pattern [info]
[AV]-R-[NFY]-R-x(2,3)-[ST]-{S}-S-{NS}-S.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 148 in 147 different sequences
Number of true positive hits 140 in 140 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 7 different sequences
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.59 %
Recall (true positives / (true positives + false negatives)) 89.74 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
140 sequences

HSP1_AEPRU  (Q9GLP9    ), HSP1_ALLMI  (Q7LZB6    ), HSP1_ALOSE  (P35302    ), 
HSP1_ANTBE  (Q71V18    ), HSP1_ANTFL  (Q71V20    ), HSP1_ANTGO  (Q71V17    ), 
HSP1_ANTLA  (O18745    ), HSP1_ANTLE  (Q71V16    ), HSP1_ANTMI  (Q71V19    ), 
HSP1_ANTNA  (Q71V12    ), HSP1_ANTST  (P42129    ), HSP1_ANTSW  (Q71V22    ), 
HSP1_BETPE  (Q9GLQ0    ), HSP1_BOVIN  (P02318    ), HSP1_CAEFU  (P42131    ), 
HSP1_CAPHI  (P67833    ), HSP1_CAVPO  (P35304    ), HSP1_CHICK  (P15340    ), 
HSP1_CHIMC  (Q8WNZ4    ), HSP1_CHRPI  (Q7LZB2    ), HSP1_COLGU  (Q9GKQ5    ), 
HSP1_CORTO  (Q8WNZ0    ), HSP1_COTJA  (P14402    ), HSP1_DASAL  (P67851    ), 
HSP1_DASBY  (Q71VG7    ), HSP1_DASCR  (Q71VG8    ), HSP1_DASGE  (P67850    ), 
HSP1_DASHA  (P67834    ), HSP1_DASMA  (P62485    ), HSP1_DASRO  (P67830    ), 
HSP1_DASSP  (P67849    ), HSP1_DASVI  (P67835    ), HSP1_DENDO  (Q9GLQ6    ), 
HSP1_DENGO  (P67838    ), HSP1_DESRO  (Q8WME4    ), HSP1_DIDVI  (P67837    ), 
HSP1_DORMU  (P67841    ), HSP1_DORVA  (Q9GLQ4    ), HSP1_DROGL  (P42132    ), 
HSP1_EQUAS  (Q66QC7    ), HSP1_GORGO  (P35303    ), HSP1_HIPCO  (Q8WNZ8    ), 
HSP1_HORSE  (P15341    ), HSP1_HUMAN  (P04553    ), HSP1_HYLLA  (P35306    ), 
HSP1_HYPMS  (Q9GLQ1    ), HSP1_LAGFA  (Q866P6    ), HSP1_LAGHI  (Q9GLQ2    ), 
HSP1_MACAG  (P42137    ), HSP1_MACEU  (P42138    ), HSP1_MACGI  (P42139    ), 
HSP1_MACMU  (Q9GJU4    ), HSP1_MACPA  (Q9GLQ9    ), HSP1_MACRG  (P67842    ), 
HSP1_MACRU  (P42142    ), HSP1_MICHA  (Q71V13    ), HSP1_MONDO  (P67836    ), 
HSP1_MONRE  (Q7JH06    ), HSP1_MORME  (Q8WNZ5    ), HSP1_MOUSE  (P02319    ), 
HSP1_MURLO  (P67848    ), HSP1_MURME  (Q71V14    ), HSP1_MYOME  (Q71VH0    ), 
HSP1_MYOWA  (Q71VG9    ), HSP1_MYRFA  (P67845    ), HSP1_NATST  (Q8WNZ3    ), 
HSP1_NEOLO  (P67852    ), HSP1_NINRI  (Q71VP7    ), HSP1_NINTI  (Q71VP5    ), 
HSP1_NINYV  (Q71VP6    ), HSP1_NOTTY  (P42143    ), HSP1_ONCFR  (Q9GLQ3    ), 
HSP1_ONYUN  (P67839    ), HSP1_ORCOR  (P24713    ), HSP1_ORNAN  (P35307    ), 
HSP1_OTOHE  (Q8WNZ2    ), HSP1_PANPA  (P35308    ), HSP1_PANTR  (P35309    ), 
HSP1_PAPCY  (Q7JIX8    ), HSP1_PARAP  (P67831    ), HSP1_PARRT  (Q71V11    ), 
HSP1_PETCN  (Q9GLQ5    ), HSP1_PETXA  (Q9GLQ7    ), HSP1_PHACI  (P79990    ), 
HSP1_PHACL  (Q71V10    ), HSP1_PHADO  (P67853    ), HSP1_PHATA  (P67847    ), 
HSP1_PIG    (P04101    ), HSP1_PILBA  (Q8MJT0    ), HSP1_PLAMM  (Q71VP4    ), 
HSP1_PLEAU  (Q8WNZ1    ), HSP1_PONPY  (P35310    ), HSP1_POTLO  (Q9GLP8    ), 
HSP1_PSEBA  (O18768    ), HSP1_PSECU  (P42145    ), HSP1_PSEMD  (P67832    ), 
HSP1_PSENI  (Q71VG5    ), HSP1_PSEWO  (Q71VG4    ), HSP1_PTEHP  (Q8WNZ9    ), 
HSP1_PTEPA  (Q7JH07    ), HSP1_RABIT  (P10119    ), HSP1_RAT    (P10118    ), 
HSP1_RHIHA  (Q8WNZ6    ), HSP1_SAGIM  (P24714    ), HSP1_SAISC  (Q9GKQ1    ), 
HSP1_SARHA  (P62486    ), HSP1_SEMEN  (Q9GJR3    ), HSP1_SETBR  (P67840    ), 
HSP1_SHEEP  (P68038    ), HSP1_SMIAI  (Q71UG9    ), HSP1_SMIAR  (Q71UG8    ), 
HSP1_SMIBI  (Q9TUC4    ), HSP1_SMICR  (P67844    ), HSP1_SMIDL  (Q71UG7    ), 
HSP1_SMIDO  (Q71UG6    ), HSP1_SMIGA  (Q71UG4    ), HSP1_SMIGI  (Q71UG5    ), 
HSP1_SMIGR  (Q9TUC3    ), HSP1_SMIHI  (Q71UG3    ), HSP1_SMILE  (Q71UG2    ), 
HSP1_SMILO  (Q9TUC2    ), HSP1_SMIMA  (Q71VP8    ), HSP1_SMIMU  (Q71VP9    ), 
HSP1_SMIOO  (Q71UG1    ), HSP1_SMIPS  (Q71UG0    ), HSP1_SMIVI  (Q71UF9    ), 
HSP1_SMIYO  (Q71UF8    ), HSP1_TACAC  (P35311    ), HSP1_THYCY  (P67846    ), 
HSP1_THYST  (Q9GLQ8    ), HSP1_TRACR  (Q9GKQ2    ), HSP1_TRAFR  (Q9GKQ4    ), 
HSP1_TRAGE  (Q7JHM8    ), HSP1_TRAJO  (Q8MJS8    ), HSP1_TRAOB  (Q7JIX9    ), 
HSP1_TRAPH  (Q8MHZ2    ), HSP1_TRAPL  (Q7JHM9    ), HSP1_TRAVT  (Q7JIY0    ), 
HSP1_TRIVU  (P42152    ), HSP1_WALBI  (P67843    )
» more

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

HSP1_EPTBR  (Q8WMC7    ), HSP1_EPTFU  (Q7JH05    ), HSP1_GALVR  (Q8WP00    ), 
HSP1_GLABE  (Q8WNY9    ), HSP1_HYPSA  (Q7JH04    ), HSP1_ISOMA  (P42136    ), 
HSP1_MURCY  (Q8WNY7    ), HSP1_MYODA  (Q8WNY8    ), HSP1_NASLA  (Q9GKQ3    ), 
HSP1_NEOBU  (Q8WMD3    ), HSP1_PERGU  (P42147    ), HSP1_PLAGI  (O18747    ), 
HSP1_PLAIN  (P42148    ), HSP1_PLAMS  (O18746    ), HSP1_PLATE  (O18748    ), 
HSP1_RHIFE  (Q8WNZ7    )
» more

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

CSR2_YEAST  (Q12734    ), PININ_BOVIN (P79122    ), PRM2_RATTU  (Q91VB3    ), 
RBR_HIEPI   (B1ABR6    ), RBR_PILOF   (B1ABS0    ), SGO1_CANGA  (Q6FMT2    ), 
SPT13_HUMAN (Q96N96    )
» more


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