Entry: PS00072

General information about the entry

Entry name [info] ACYL_COA_DH_1
Accession [info] PS00072
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1997 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 1.
Pattern [info]
[GAC]-[LIVM]-[ST]-E-x(2)-[GSAN]-G-[ST]-D-x(2)-[GSA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 117 in 117 different sequences
Number of true positive hits 114 in 114 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 25
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.44 %
Recall (true positives / (true positives + false negatives)) 82.01 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
114 sequences

ACAD1_CAEBR (A8XNF0    ), ACAD2_CAEBR (A8WP91    ), ACAD8_BOVIN (Q0NXR6    ), 
ACAD8_DICDI (Q54IM8    ), ACAD8_HUMAN (Q9UKU7    ), ACAD8_MOUSE (Q9D7B6    ), 
ACAD9_HUMAN (Q9H845    ), ACAD9_MOUSE (Q8JZN5    ), ACADL_HUMAN (P28330    ), 
ACADL_MACFA (Q60HI0    ), ACADL_MOUSE (P51174    ), ACADL_PIG   (P79274    ), 
ACADL_RAT   (P15650    ), ACADM_BOVIN (Q3SZB4    ), ACADM_CAEEL (Q22347    ), 
ACADM_DROME (Q9VSA3    ), ACADM_HUMAN (P11310    ), ACADM_MACFA (Q8HXY8    ), 
ACADM_MOUSE (P45952    ), ACADM_PANTR (A5A6I0    ), ACADM_PIG   (P41367    ), 
ACADM_RAT   (P08503    ), ACADS_BOVIN (Q3ZBF6    ), ACADS_HUMAN (P16219    ), 
ACADS_MOUSE (Q07417    ), ACADS_PIG   (P79273    ), ACADS_PONAB (Q5RAS0    ), 
ACADS_RAT   (P15651    ), ACADV_BOVIN (P48818    ), ACADV_HUMAN (P49748    ), 
ACADV_MACFA (Q8HXY7    ), ACADV_MOUSE (P50544    ), ACADV_RAT   (P45953    ), 
ACDA_BACSU  (P45867    ), ACDB_BACSU  (P45857    ), ACDC_BACSU  (O34421    ), 
ACDP_MYCBO  (P63428    ), ACDP_MYCLE  (P46703    ), ACDP_MYCTO  (P9WQG0    ), 
ACDP_MYCTU  (P9WQG1    ), ACDSB_BOVIN (Q5EAD4    ), ACDSB_DICDI (Q54RR5    ), 
ACDSB_HUMAN (P45954    ), ACDSB_MOUSE (Q9DBL1    ), ACDSB_PONAB (Q5RF40    ), 
ACDSB_RAT   (P70584    ), ACDS_CLOAB  (P52042    ), ACDS_MEGEL  (Q06319    ), 
ACD_DESML   (C3UVB0    ), ACOX4_ARATH (Q96329    ), ACRC_CLOPR  (G3KIM8    ), 
AIDB_ECOLI  (P33224    ), CAIA_CITK8  (A8ALR4    ), CAIA_ECO24  (A7ZHD0    ), 
CAIA_ECO27  (B7UI85    ), CAIA_ECO45  (B7MAG2    ), CAIA_ECO55  (B7L4G2    ), 
CAIA_ECO57  (P60586    ), CAIA_ECO5E  (B5YYD3    ), CAIA_ECO7I  (B7NHE3    ), 
CAIA_ECO81  (B7MNP6    ), CAIA_ECO8A  (B7M0D6    ), CAIA_ECOBW  (C4ZPW5    ), 
CAIA_ECODH  (B1XBG4    ), CAIA_ECOHS  (A7ZVY9    ), CAIA_ECOK1  (A1A789    ), 
CAIA_ECOL5  (Q0TLV0    ), CAIA_ECOL6  (P60585    ), CAIA_ECOLC  (B1IRD7    ), 
CAIA_ECOLI  (P60584    ), CAIA_ECOLU  (B7N7R4    ), CAIA_ECOSE  (B6HYZ0    ), 
CAIA_ECOSM  (B1LFX2    ), CAIA_ECOUT  (Q1RGF9    ), CAIA_ESCF3  (B7LWN0    ), 
CAIA_PROMH  (B4EY23    ), CAIA_PROSL  (Q8GB20    ), CAIA_SALA4  (B5F752    ), 
CAIA_SALAR  (A9MQH5    ), CAIA_SALCH  (Q57TI8    ), CAIA_SALDC  (B5FHG7    ), 
CAIA_SALEP  (B5R1R2    ), CAIA_SALG2  (B5RGA6    ), CAIA_SALHS  (B4TIH2    ), 
CAIA_SALNS  (B4T6J8    ), CAIA_SALPA  (Q5PIN6    ), CAIA_SALPB  (A9MYJ9    ), 
CAIA_SALPC  (C0Q4L5    ), CAIA_SALPK  (B5BL57    ), CAIA_SALSV  (B4TWR6    ), 
CAIA_SALTI  (Q8Z9L2    ), CAIA_SALTY  (Q8ZRX2    ), CAIA_SHIDS  (Q32K58    ), 
CAIA_SHIF8  (Q0T8F5    ), CAIA_SHIFL  (P60587    ), CAIA_SHISS  (Q3Z5W9    ), 
CARC_ACEWD  (H6LGM6    ), FADE_BACSU  (O32176    ), GCDH_DICDI  (Q54R47    ), 
GCDH_HUMAN  (Q92947    ), GCDH_MACFA  (Q8HXX8    ), IVD_ARATH   (Q9SWG0    ), 
IVD_BOVIN   (Q3SZI8    ), IVD_CAEEL   (P34275    ), IVD_HUMAN   (P26440    ), 
IVD_MOUSE   (Q9JHI5    ), IVD_ORYSJ   (Q75IM9    ), IVD_PONAB   (Q5RBD5    ), 
IVD_RAT     (P12007    ), IVD_SOLTU   (Q9FS87    ), MBCD_SOLTU  (Q9FS88    ), 
YDIO_ECO57  (P0A9V0    ), YDIO_ECOL6  (P0A9U9    ), YDIO_ECOLI  (P0A9U8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

ACD10_HUMAN (Q6JQN1    ), ACD10_MOUSE (Q8K370    ), ACDC_MYCBO  (Q7U0Y2    ), 
ACDC_MYCTO  (P9WQG2    ), ACDC_MYCTU  (P9WQG3    ), BBSG_THAAR  (Q9KJE8    ), 
CH1CO_SYNAS (Q2LQN9    ), CHCOA_SYNAS (Q2LQP0    ), FADE_ECOLI  (Q47146    ), 
GCDH_BOVIN  (Q2KHZ9    ), GCDH_CAEEL  (Q20772    ), GCDH_MOUSE  (Q60759    ), 
GCDH_PIG    (P81140    ), MBTN_MYCBO  (P63432    ), MBTN_MYCPA  (Q73ZP8    ), 
MBTN_MYCSS  (Q1BBA3    ), MBTN_MYCTO  (P9WQF8    ), MBTN_MYCTU  (P9WQF9    ), 
MCD_RHOSH   (D3JV03    ), NAO_FUSOX   (Q8X1D8    ), PIGA_SERS3  (Q5W271    ), 
Y873_MYCTO  (P9WQF6    ), Y873_MYCTU  (P9WQF7    ), Y897_MYCBO  (P63430    ), 
YDBM_BACSU  (P96608    )
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

IWS1_MOUSE  (Q8C1D8    ), LEA3_ORYSI  (A2Y720    ), LEA3_ORYSJ  (P0C5A4    )

		
PDB
[Detailed view]
27 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1RX0; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3MPI; 3MPJ; 3U33; 4P13
» more

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