Entry: PS00072

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General information about the entry

Entry name [info] ACYL_COA_DH_1
Accession [info] PS00072
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1997 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 1.
Pattern [info]
[GAC]-[LIVM]-[ST]-E-x(2)-[GSAN]-G-[ST]-D-x(2)-[GSA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 116 in 116 different sequences
Number of true positive hits 113 in 113 different sequences
Number of 'unknown' hits
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 21
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.41 %
Recall (true positives / (true positives + false negatives)) 84.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
113 sequences

ACAD1_CAEBR (A8XNF0), ACAD2_CAEBR (A8WP91), ACAD8_BOVIN (Q0NXR6), 
ACAD8_DICDI (Q54IM8), ACAD8_HUMAN (Q9UKU7), ACAD8_MOUSE (Q9D7B6), 
ACAD9_HUMAN (Q9H845), ACAD9_MOUSE (Q8JZN5), ACADL_HUMAN (P28330), 
ACADL_MACFA (Q60HI0), ACADL_MOUSE (P51174), ACADL_PIG   (P79274), 
ACADL_RAT   (P15650), ACADM_BOVIN (Q3SZB4), ACADM_CAEEL (Q22347), 
ACADM_DROME (Q9VSA3), ACADM_HUMAN (P11310), ACADM_MACFA (Q8HXY8), 
ACADM_MOUSE (P45952), ACADM_PANTR (A5A6I0), ACADM_PIG   (P41367), 
ACADM_RAT   (P08503), ACADS_BOVIN (Q3ZBF6), ACADS_HUMAN (P16219), 
ACADS_MOUSE (Q07417), ACADS_PIG   (P79273), ACADS_PONAB (Q5RAS0), 
ACADS_RAT   (P15651), ACADV_BOVIN (P48818), ACADV_HUMAN (P49748), 
ACADV_MACFA (Q8HXY7), ACADV_MOUSE (P50544), ACADV_RAT   (P45953), 
ACDA_BACSU  (P45867), ACDB_BACSU  (P45857), ACDC_BACSU  (O34421), 
ACDP_MYCBO  (P63428), ACDP_MYCLE  (P46703), ACDP_MYCTO  (P9WQG0), 
ACDP_MYCTU  (P9WQG1), ACDSB_BOVIN (Q5EAD4), ACDSB_DICDI (Q54RR5), 
ACDSB_HUMAN (P45954), ACDSB_MOUSE (Q9DBL1), ACDSB_PONAB (Q5RF40), 
ACDSB_RAT   (P70584), ACDS_CLOAB  (P52042), ACDS_MEGEL  (Q06319), 
ACD_DESML   (C3UVB0), ACOX4_ARATH (Q96329), ACRC_CLOPR  (G3KIM8), 
AIDB_ECOLI  (P33224), CAIA_CITK8  (A8ALR4), CAIA_ECO24  (A7ZHD0), 
CAIA_ECO27  (B7UI85), CAIA_ECO45  (B7MAG2), CAIA_ECO55  (B7L4G2), 
CAIA_ECO57  (P60586), CAIA_ECO5E  (B5YYD3), CAIA_ECO7I  (B7NHE3), 
CAIA_ECO81  (B7MNP6), CAIA_ECO8A  (B7M0D6), CAIA_ECOBW  (C4ZPW5), 
CAIA_ECODH  (B1XBG4), CAIA_ECOHS  (A7ZVY9), CAIA_ECOK1  (A1A789), 
CAIA_ECOL5  (Q0TLV0), CAIA_ECOL6  (P60585), CAIA_ECOLC  (B1IRD7), 
CAIA_ECOLI  (P60584), CAIA_ECOLU  (B7N7R4), CAIA_ECOSE  (B6HYZ0), 
CAIA_ECOSM  (B1LFX2), CAIA_ECOUT  (Q1RGF9), CAIA_ESCF3  (B7LWN0), 
CAIA_PROMH  (B4EY23), CAIA_PROSL  (Q8GB20), CAIA_SALA4  (B5F752), 
CAIA_SALAR  (A9MQH5), CAIA_SALCH  (Q57TI8), CAIA_SALDC  (B5FHG7), 
CAIA_SALEP  (B5R1R2), CAIA_SALG2  (B5RGA6), CAIA_SALHS  (B4TIH2), 
CAIA_SALNS  (B4T6J8), CAIA_SALPA  (Q5PIN6), CAIA_SALPB  (A9MYJ9), 
CAIA_SALPC  (C0Q4L5), CAIA_SALPK  (B5BL57), CAIA_SALSV  (B4TWR6), 
CAIA_SALTI  (Q8Z9L2), CAIA_SALTY  (Q8ZRX2), CAIA_SHIDS  (Q32K58), 
CAIA_SHIF8  (Q0T8F5), CAIA_SHIFL  (P60587), CAIA_SHISS  (Q3Z5W9), 
FADE_BACSU  (O32176), GCDH_DICDI  (Q54R47), GCDH_HUMAN  (Q92947), 
GCDH_MACFA  (Q8HXX8), IVD_ARATH   (Q9SWG0), IVD_BOVIN   (Q3SZI8), 
IVD_CAEEL   (P34275), IVD_HUMAN   (P26440), IVD_MOUSE   (Q9JHI5), 
IVD_ORYSJ   (Q75IM9), IVD_PONAB   (Q5RBD5), IVD_RAT     (P12007), 
IVD_SOLTU   (Q9FS87), MBCD_SOLTU  (Q9FS88), YDIO_ECO57  (P0A9V0), 
YDIO_ECOL6  (P0A9U9), YDIO_ECOLI  (P0A9U8)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

ACD10_HUMAN (Q6JQN1), ACD10_MOUSE (Q8K370), ACDC_MYCBO  (Q7U0Y2), 
ACDC_MYCTO  (P9WQG2), ACDC_MYCTU  (P9WQG3), BBSG_THAAR  (Q9KJE8), 
FADE_ECOLI  (Q47146), GCDH_BOVIN  (Q2KHZ9), GCDH_CAEEL  (Q20772), 
GCDH_MOUSE  (Q60759), GCDH_PIG    (P81140), MBTN_MYCBO  (P63432), 
MBTN_MYCPA  (Q73ZP8), MBTN_MYCSS  (Q1BBA3), MBTN_MYCTO  (P9WQF8), 
MBTN_MYCTU  (P9WQF9), NAO_FUSOX   (Q8X1D8), Y873_MYCTO  (P9WQF6), 
Y873_MYCTU  (P9WQF7), Y897_MYCBO  (P63430), YDBM_BACSU  (P96608)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

IWS1_MOUSE  (Q8C1D8), LEA3_ORYSI  (A2Y720), LEA3_ORYSJ  (P0C5A4)

		
PDB
[Detailed view]
26 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1RX0; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3MPI; 3MPJ; 3U33
» More

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