Entry: PS00072

General information about the entry

Entry name [info] ACYL_COA_DH_1
Accession [info] PS00072
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1997 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 1.
Pattern [info]
[GAC]-[LIVM]-[ST]-E-x(2)-[GSAN]-G-[ST]-D-x(2)-[GSA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 116 in 116 different sequences
Number of true positive hits 113 in 113 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 23
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.41 %
Recall (true positives / (true positives + false negatives)) 83.09 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
113 sequences

ACAD1_CAEBR (A8XNF0), ACAD2_CAEBR (A8WP91), ACAD8_BOVIN (Q0NXR6), 
ACAD8_DICDI (Q54IM8), ACAD8_HUMAN (Q9UKU7), ACAD8_MOUSE (Q9D7B6), 
ACAD9_HUMAN (Q9H845), ACAD9_MOUSE (Q8JZN5), ACADL_HUMAN (P28330), 
ACADL_MACFA (Q60HI0), ACADL_MOUSE (P51174), ACADL_PIG   (P79274), 
ACADL_RAT   (P15650), ACADM_BOVIN (Q3SZB4), ACADM_CAEEL (Q22347), 
ACADM_DROME (Q9VSA3), ACADM_HUMAN (P11310), ACADM_MACFA (Q8HXY8), 
ACADM_MOUSE (P45952), ACADM_PANTR (A5A6I0), ACADM_PIG   (P41367), 
ACADM_RAT   (P08503), ACADS_BOVIN (Q3ZBF6), ACADS_HUMAN (P16219), 
ACADS_MOUSE (Q07417), ACADS_PIG   (P79273), ACADS_PONAB (Q5RAS0), 
ACADS_RAT   (P15651), ACADV_BOVIN (P48818), ACADV_HUMAN (P49748), 
ACADV_MACFA (Q8HXY7), ACADV_MOUSE (P50544), ACADV_RAT   (P45953), 
ACDA_BACSU  (P45867), ACDB_BACSU  (P45857), ACDC_BACSU  (O34421), 
ACDP_MYCBO  (P63428), ACDP_MYCLE  (P46703), ACDP_MYCTO  (P9WQG0), 
ACDP_MYCTU  (P9WQG1), ACDSB_BOVIN (Q5EAD4), ACDSB_DICDI (Q54RR5), 
ACDSB_HUMAN (P45954), ACDSB_MOUSE (Q9DBL1), ACDSB_PONAB (Q5RF40), 
ACDSB_RAT   (P70584), ACDS_CLOAB  (P52042), ACDS_MEGEL  (Q06319), 
ACD_DESML   (C3UVB0), ACOX4_ARATH (Q96329), ACRC_CLOPR  (G3KIM8), 
AIDB_ECOLI  (P33224), CAIA_CITK8  (A8ALR4), CAIA_ECO24  (A7ZHD0), 
CAIA_ECO27  (B7UI85), CAIA_ECO45  (B7MAG2), CAIA_ECO55  (B7L4G2), 
CAIA_ECO57  (P60586), CAIA_ECO5E  (B5YYD3), CAIA_ECO7I  (B7NHE3), 
CAIA_ECO81  (B7MNP6), CAIA_ECO8A  (B7M0D6), CAIA_ECOBW  (C4ZPW5), 
CAIA_ECODH  (B1XBG4), CAIA_ECOHS  (A7ZVY9), CAIA_ECOK1  (A1A789), 
CAIA_ECOL5  (Q0TLV0), CAIA_ECOL6  (P60585), CAIA_ECOLC  (B1IRD7), 
CAIA_ECOLI  (P60584), CAIA_ECOLU  (B7N7R4), CAIA_ECOSE  (B6HYZ0), 
CAIA_ECOSM  (B1LFX2), CAIA_ECOUT  (Q1RGF9), CAIA_ESCF3  (B7LWN0), 
CAIA_PROMH  (B4EY23), CAIA_PROSL  (Q8GB20), CAIA_SALA4  (B5F752), 
CAIA_SALAR  (A9MQH5), CAIA_SALCH  (Q57TI8), CAIA_SALDC  (B5FHG7), 
CAIA_SALEP  (B5R1R2), CAIA_SALG2  (B5RGA6), CAIA_SALHS  (B4TIH2), 
CAIA_SALNS  (B4T6J8), CAIA_SALPA  (Q5PIN6), CAIA_SALPB  (A9MYJ9), 
CAIA_SALPC  (C0Q4L5), CAIA_SALPK  (B5BL57), CAIA_SALSV  (B4TWR6), 
CAIA_SALTI  (Q8Z9L2), CAIA_SALTY  (Q8ZRX2), CAIA_SHIDS  (Q32K58), 
CAIA_SHIF8  (Q0T8F5), CAIA_SHIFL  (P60587), CAIA_SHISS  (Q3Z5W9), 
FADE_BACSU  (O32176), GCDH_DICDI  (Q54R47), GCDH_HUMAN  (Q92947), 
GCDH_MACFA  (Q8HXX8), IVD_ARATH   (Q9SWG0), IVD_BOVIN   (Q3SZI8), 
IVD_CAEEL   (P34275), IVD_HUMAN   (P26440), IVD_MOUSE   (Q9JHI5), 
IVD_ORYSJ   (Q75IM9), IVD_PONAB   (Q5RBD5), IVD_RAT     (P12007), 
IVD_SOLTU   (Q9FS87), MBCD_SOLTU  (Q9FS88), YDIO_ECO57  (P0A9V0), 
YDIO_ECOL6  (P0A9U9), YDIO_ECOLI  (P0A9U8)
» More

UniProtKB/Swiss-Prot
False negative sequences
23 sequences

ACD10_HUMAN (Q6JQN1), ACD10_MOUSE (Q8K370), ACDC_MYCBO  (Q7U0Y2), 
ACDC_MYCTO  (P9WQG2), ACDC_MYCTU  (P9WQG3), BBSG_THAAR  (Q9KJE8), 
CH1CO_SYNAS (Q2LQN9), CHCOA_SYNAS (Q2LQP0), FADE_ECOLI  (Q47146), 
GCDH_BOVIN  (Q2KHZ9), GCDH_CAEEL  (Q20772), GCDH_MOUSE  (Q60759), 
GCDH_PIG    (P81140), MBTN_MYCBO  (P63432), MBTN_MYCPA  (Q73ZP8), 
MBTN_MYCSS  (Q1BBA3), MBTN_MYCTO  (P9WQF8), MBTN_MYCTU  (P9WQF9), 
NAO_FUSOX   (Q8X1D8), Y873_MYCTO  (P9WQF6), Y873_MYCTU  (P9WQF7), 
Y897_MYCBO  (P63430), YDBM_BACSU  (P96608)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

IWS1_MOUSE  (Q8C1D8), LEA3_ORYSI  (A2Y720), LEA3_ORYSJ  (P0C5A4)

		
PDB
[Detailed view]
27 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1RX0; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3MPI; 3MPJ; 3U33; 4P13
» More

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