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PROSITE entry PS00072


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General information about the entry

Entry name [info] ACYL_COA_DH_1
Accession [info] PS00072
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE;
24-JAN-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 1.
Pattern [info]
[GAC]-[LIVM]-[ST]-E-x(2)-[GSAN]-G-[ST]-D-x(2)-[GSA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_01 which contains 570'830 sequence entries.


Total number of hits 122 in 122 different sequences
Number of true positive hits 118 in 118 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.72 %
Recall (true positives / (true positives + false negatives)) 70.66 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
118 sequences

ACAD1_CAEBR (A8XNF0), ACAD2_CAEBR (A8WP91), ACAD8_BOVIN (Q0NXR6), 
ACAD8_DICDI (Q54IM8), ACAD8_HUMAN (Q9UKU7), ACAD8_MOUSE (Q9D7B6), 
ACAD9_HUMAN (Q9H845), ACAD9_MOUSE (Q8JZN5), ACAD9_RAT   (B1WC61), 
ACADL_HUMAN (P28330), ACADL_MACFA (Q60HI0), ACADL_MOUSE (P51174), 
ACADL_PIG   (P79274), ACADL_RAT   (P15650), ACADM_BOVIN (Q3SZB4), 
ACADM_CAEEL (Q22347), ACADM_DROME (Q9VSA3), ACADM_HUMAN (P11310), 
ACADM_MACFA (Q8HXY8), ACADM_MOUSE (P45952), ACADM_PANTR (A5A6I0), 
ACADM_PIG   (P41367), ACADM_RAT   (P08503), ACADS_BOVIN (Q3ZBF6), 
ACADS_HUMAN (P16219), ACADS_MOUSE (Q07417), ACADS_PIG   (P79273), 
ACADS_PONAB (Q5RAS0), ACADS_RAT   (P15651), ACADV_BOVIN (P48818), 
ACADV_HUMAN (P49748), ACADV_MACFA (Q8HXY7), ACADV_MOUSE (P50544), 
ACADV_RAT   (P45953), ACDA_BACSU  (P45867), ACDA_CLOS1  (J7TF92), 
ACDB_BACSU  (P45857), ACDC_BACSU  (O34421), ACDP_MYCBO  (P63428), 
ACDP_MYCLE  (P46703), ACDP_MYCTO  (P9WQG0), ACDP_MYCTU  (P9WQG1), 
ACDSB_BOVIN (Q5EAD4), ACDSB_DICDI (Q54RR5), ACDSB_HUMAN (P45954), 
ACDSB_MOUSE (Q9DBL1), ACDSB_PONAB (Q5RF40), ACDSB_RAT   (P70584), 
ACDS_CLOAB  (P52042), ACDS_MEGEL  (Q06319), ACD_DESML   (C3UVB0), 
ACOX4_ARATH (Q96329), ACRC_ANAPI  (G3KIM8), AIDB_ECOLI  (P33224), 
APDG_EMENI  (Q5ATG5), CAIA_CITK8  (A8ALR4), CAIA_ECO24  (A7ZHD0), 
CAIA_ECO27  (B7UI85), CAIA_ECO45  (B7MAG2), CAIA_ECO55  (B7L4G2), 
CAIA_ECO57  (P60586), CAIA_ECO5E  (B5YYD3), CAIA_ECO7I  (B7NHE3), 
CAIA_ECO81  (B7MNP6), CAIA_ECO8A  (B7M0D6), CAIA_ECOBW  (C4ZPW5), 
CAIA_ECODH  (B1XBG4), CAIA_ECOHS  (A7ZVY9), CAIA_ECOK1  (A1A789), 
CAIA_ECOL5  (Q0TLV0), CAIA_ECOL6  (P60585), CAIA_ECOLC  (B1IRD7), 
CAIA_ECOLI  (P60584), CAIA_ECOLU  (B7N7R4), CAIA_ECOSE  (B6HYZ0), 
CAIA_ECOSM  (B1LFX2), CAIA_ECOUT  (Q1RGF9), CAIA_ESCF3  (B7LWN0), 
CAIA_PROMH  (B4EY23), CAIA_PROSL  (Q8GB20), CAIA_SALA4  (B5F752), 
CAIA_SALAR  (A9MQH5), CAIA_SALCH  (Q57TI8), CAIA_SALDC  (B5FHG7), 
CAIA_SALEP  (B5R1R2), CAIA_SALG2  (B5RGA6), CAIA_SALHS  (B4TIH2), 
CAIA_SALNS  (B4T6J8), CAIA_SALPA  (Q5PIN6), CAIA_SALPB  (A9MYJ9), 
CAIA_SALPC  (C0Q4L5), CAIA_SALPK  (B5BL57), CAIA_SALSV  (B4TWR6), 
CAIA_SALTI  (Q8Z9L2), CAIA_SALTY  (Q8ZRX2), CAIA_SHIDS  (Q32K58), 
CAIA_SHIF8  (Q0T8F5), CAIA_SHIFL  (P60587), CAIA_SHISS  (Q3Z5W9), 
CARC_ACEWD  (H6LGM6), FADE_BACSU  (O32176), GCDH_DICDI  (Q54R47), 
GCDH_HUMAN  (Q92947), GCDH_MACFA  (Q8HXX8), IAAF_AROAE  (Q5P5Z9), 
IVD_ARATH   (Q9SWG0), IVD_BOVIN   (Q3SZI8), IVD_CAEEL   (P34275), 
IVD_HUMAN   (P26440), IVD_MOUSE   (Q9JHI5), IVD_ORYSJ   (Q75IM9), 
IVD_PONAB   (Q5RBD5), IVD_RAT (P12007), IVD_SOLTU   (Q9FS87), 
MBCD_SOLTU  (Q9FS88), YDIO_ECO57  (P0A9V0), YDIO_ECOL6  (P0A9U9), 
YDIO_ECOLI  (P0A9U8)
» more

UniProtKB/Swiss-Prot
False negative sequences
49 sequences

ACD10_HUMAN (Q6JQN1), ACD10_MOUSE (Q8K370), ACD17_MYCTU (P95280), 
ACD2_MYCTU  (P96831), ACDC_MYCBO  (Q7U0Y2), ACDC_MYCTO  (P9WQG2), 
ACDC_MYCTU  (P9WQG3), BBSG_THAAR  (Q9KJE8), CH1CO_SYNAS (Q2LQN9), 
CHCOA_SYNAS (Q2LQP0), CHSE1_MYCTU (P71857), CHSE2_MYCTU (P71858), 
CHSE3_MYCTU (P96855), CHSE4_MYCTU (I6YCA3), CHSE5_MYCTU (I6Y3Q0), 
FADE5_MYCS2 (Q3L887), FADE5_MYCTU (O53666), FADE_ECO57  (Q8X7R2), 
FADE_ECOLI  (Q47146), FADE_SALTI  (Q8Z937), FADE_SALTY  (Q8ZRJ7), 
FADE_YERPE  (Q8ZBY6), GCDH_BOVIN  (Q2KHZ9), GCDH_CAEEL  (Q20772), 
GCDH_MOUSE  (Q60759), GCDH_PIG(P81140), IPDE1_MYCS2 (A0R4Z9), 
IPDE1_MYCTU (I6Y3V5), IPDE2_MYCS2 (A0R502), IPDE2_MYCTU (I6YCF5), 
MBTN_MYCBO  (P63432), MBTN_MYCPA  (Q73ZP8), MBTN_MYCSS  (Q1BBA3), 
MBTN_MYCTO  (P9WQF8), MBTN_MYCTU  (P9WQF9), MCD_CERSP   (D3JV03), 
NAO_FUSOX   (Q8X1D8), NITSS_MICS3 (C4RPA1), NITSS_STRPE (A0A0R4I990), 
NITSS_STRRR (Q2PC69), PIGA_SERS3  (Q5W271), SPCAD_ADVMD (K4L7X3), 
SPCAD_CUPNN (F8GVD3), SPCAD_PARXL (Q13PC1), SPCAD_VARPD (B9U6P5), 
Y873_MYCTO  (P9WQF6), Y873_MYCTU  (P9WQF7), Y897_MYCBO  (P63430), 
YDBM_BACSU  (P96608)
» more

UniProtKB/Swiss-Prot
False positive sequences
4 sequences

ABCI_ASPFU  (Q4WUS1), IWS1_MOUSE  (Q8C1D8), LEA19_ORYSI (A2Y720), 
LEA19_ORYSJ (P0C5A4)
» more

PDB
[Detailed view]
32 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1RX0; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3MPI; 3MPJ; 3U33; 4P13; 5LNX; 6FAH; 7S7G; 7Y0A; 7Y0B
» more