Entry: PS00073

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General information about the entry

Entry name [info] ACYL_COA_DH_2
Accession [info] PS00073
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 2.
Pattern [info]
[QDE]-x-{P}-G-[GS]-x-G-[LIVMFY]-x(2)-[DEN]-x(4)-[KR]-x(3)-[DEN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 116 in 116 different sequences
Number of true positive hits 110 in 110 different sequences
Number of 'unknown' hits
Number of false positive hits 6 in 6 different sequences
Number of false negative sequences 23
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.83 %
Recall (true positives / (true positives + false negatives)) 82.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
110 sequences

ACAD1_CAEBR (A8XNF0), ACAD8_DICDI (Q54IM8), ACAD9_HUMAN (Q9H845), 
ACAD9_MOUSE (Q8JZN5), ACADL_HUMAN (P28330), ACADL_MACFA (Q60HI0), 
ACADL_MOUSE (P51174), ACADL_PIG   (P79274), ACADL_RAT   (P15650), 
ACADM_BOVIN (Q3SZB4), ACADM_CAEEL (Q22347), ACADM_DROME (Q9VSA3), 
ACADM_HUMAN (P11310), ACADM_MACFA (Q8HXY8), ACADM_MOUSE (P45952), 
ACADM_PANTR (A5A6I0), ACADM_PIG   (P41367), ACADM_RAT   (P08503), 
ACADS_BOVIN (Q3ZBF6), ACADS_HUMAN (P16219), ACADS_MOUSE (Q07417), 
ACADS_PIG   (P79273), ACADS_PONAB (Q5RAS0), ACADS_RAT   (P15651), 
ACADV_BOVIN (P48818), ACADV_HUMAN (P49748), ACADV_MACFA (Q8HXY7), 
ACADV_MOUSE (P50544), ACADV_RAT   (P45953), ACDA_BACSU  (P45867), 
ACDB_BACSU  (P45857), ACDC_BACSU  (O34421), ACDP_MYCBO  (P63428), 
ACDP_MYCLE  (P46703), ACDP_MYCTO  (P9WQG0), ACDP_MYCTU  (P9WQG1), 
ACDSB_HUMAN (P45954), ACDSB_MOUSE (Q9DBL1), ACDSB_PONAB (Q5RF40), 
ACDSB_RAT   (P70584), ACDS_CLOAB  (P52042), ACDS_MEGEL  (Q06319), 
ACOX4_ARATH (Q96329), ACRC_CLOPR  (G3KIM8), AIDB_ECOLI  (P33224), 
CAIA_CITK8  (A8ALR4), CAIA_ECO24  (A7ZHD0), CAIA_ECO27  (B7UI85), 
CAIA_ECO45  (B7MAG2), CAIA_ECO55  (B7L4G2), CAIA_ECO57  (P60586), 
CAIA_ECO5E  (B5YYD3), CAIA_ECO7I  (B7NHE3), CAIA_ECO81  (B7MNP6), 
CAIA_ECO8A  (B7M0D6), CAIA_ECOBW  (C4ZPW5), CAIA_ECODH  (B1XBG4), 
CAIA_ECOHS  (A7ZVY9), CAIA_ECOK1  (A1A789), CAIA_ECOL5  (Q0TLV0), 
CAIA_ECOL6  (P60585), CAIA_ECOLC  (B1IRD7), CAIA_ECOLI  (P60584), 
CAIA_ECOLU  (B7N7R4), CAIA_ECOSE  (B6HYZ0), CAIA_ECOSM  (B1LFX2), 
CAIA_ECOUT  (Q1RGF9), CAIA_ESCF3  (B7LWN0), CAIA_PROMH  (B4EY23), 
CAIA_PROSL  (Q8GB20), CAIA_SALA4  (B5F752), CAIA_SALAR  (A9MQH5), 
CAIA_SALCH  (Q57TI8), CAIA_SALDC  (B5FHG7), CAIA_SALEP  (B5R1R2), 
CAIA_SALG2  (B5RGA6), CAIA_SALHS  (B4TIH2), CAIA_SALNS  (B4T6J8), 
CAIA_SALPA  (Q5PIN6), CAIA_SALPB  (A9MYJ9), CAIA_SALPC  (C0Q4L5), 
CAIA_SALPK  (B5BL57), CAIA_SALSV  (B4TWR6), CAIA_SALTI  (Q8Z9L2), 
CAIA_SALTY  (Q8ZRX2), CAIA_SHIDS  (Q32K58), CAIA_SHIF8  (Q0T8F5), 
CAIA_SHIFL  (P60587), CAIA_SHISS  (Q3Z5W9), FADE_BACSU  (O32176), 
GCDH_BOVIN  (Q2KHZ9), GCDH_CAEEL  (Q20772), GCDH_DICDI  (Q54R47), 
GCDH_HUMAN  (Q92947), GCDH_MACFA  (Q8HXX8), GCDH_MOUSE  (Q60759), 
GCDH_PIG    (P81140), IVD_ARATH   (Q9SWG0), IVD_BOVIN   (Q3SZI8), 
IVD_CAEEL   (P34275), IVD_HUMAN   (P26440), IVD_MOUSE   (Q9JHI5), 
IVD_ORYSJ   (Q75IM9), IVD_PONAB   (Q5RBD5), IVD_RAT     (P12007), 
IVD_SOLTU   (Q9FS87), MBCD_SOLTU  (Q9FS88), YDIO_ECO57  (P0A9V0), 
YDIO_ECOL6  (P0A9U9), YDIO_ECOLI  (P0A9U8)
» More

UniProtKB/Swiss-Prot
False negative sequences
23 sequences

ACAD8_BOVIN (Q0NXR6), ACAD8_HUMAN (Q9UKU7), ACAD8_MOUSE (Q9D7B6), 
ACD10_HUMAN (Q6JQN1), ACD10_MOUSE (Q8K370), ACDC_MYCBO  (Q7U0Y2), 
ACDC_MYCTO  (P9WQG2), ACDC_MYCTU  (P9WQG3), ACDSB_BOVIN (Q5EAD4), 
ACDSB_DICDI (Q54RR5), ACD_DESML   (C3UVB0), BBSG_THAAR  (Q9KJE8), 
FADE_ECOLI  (Q47146), MBTN_MYCBO  (P63432), MBTN_MYCPA  (Q73ZP8), 
MBTN_MYCSS  (Q1BBA3), MBTN_MYCTO  (P9WQF8), MBTN_MYCTU  (P9WQF9), 
NAO_FUSOX   (Q8X1D8), Y873_MYCTO  (P9WQF6), Y873_MYCTU  (P9WQF7), 
Y897_MYCBO  (P63430), YDBM_BACSU  (P96608)
» More

UniProtKB/Swiss-Prot
False positive sequences
6 sequences

EIF3J_KLULA (Q6CMJ8), LAMB_SERP5  (A8GKC3), NCAP_ISAV8  (Q8V3T7), 
PP392_ARATH (Q3E9F0), PPR18_ARATH (Q9M9X9), SYL_EHRCR   (Q2GG41)
» More

PDB
[Detailed view]
23 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3U33
» More

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