Entry: PS00073

General information about the entry

Entry name [info] ACYL_COA_DH_2
Accession [info] PS00073
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00070

Name and characterization of the entry

Description [info] Acyl-CoA dehydrogenases signature 2.
Pattern [info]
[QDE]-x-{P}-G-[GS]-x-G-[LIVMFY]-x(2)-[DEN]-x(4)-[KR]-x(3)-[DEN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 118 in 118 different sequences
Number of true positive hits 112 in 112 different sequences
Number of 'unknown' hits 0
Number of false positive hits 6 in 6 different sequences
Number of false negative sequences 23
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.92 %
Recall (true positives / (true positives + false negatives)) 82.96 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
112 sequences

ACAD1_CAEBR (A8XNF0), ACAD8_DICDI (Q54IM8), ACAD9_HUMAN (Q9H845), 
ACAD9_MOUSE (Q8JZN5), ACADL_HUMAN (P28330), ACADL_MACFA (Q60HI0), 
ACADL_MOUSE (P51174), ACADL_PIG   (P79274), ACADL_RAT   (P15650), 
ACADM_BOVIN (Q3SZB4), ACADM_CAEEL (Q22347), ACADM_DROME (Q9VSA3), 
ACADM_HUMAN (P11310), ACADM_MACFA (Q8HXY8), ACADM_MOUSE (P45952), 
ACADM_PANTR (A5A6I0), ACADM_PIG   (P41367), ACADM_RAT   (P08503), 
ACADS_BOVIN (Q3ZBF6), ACADS_HUMAN (P16219), ACADS_MOUSE (Q07417), 
ACADS_PIG   (P79273), ACADS_PONAB (Q5RAS0), ACADS_RAT   (P15651), 
ACADV_BOVIN (P48818), ACADV_HUMAN (P49748), ACADV_MACFA (Q8HXY7), 
ACADV_MOUSE (P50544), ACADV_RAT   (P45953), ACDA_BACSU  (P45867), 
ACDB_BACSU  (P45857), ACDC_BACSU  (O34421), ACDP_MYCBO  (P63428), 
ACDP_MYCLE  (P46703), ACDP_MYCTO  (P9WQG0), ACDP_MYCTU  (P9WQG1), 
ACDSB_HUMAN (P45954), ACDSB_MOUSE (Q9DBL1), ACDSB_PONAB (Q5RF40), 
ACDSB_RAT   (P70584), ACDS_CLOAB  (P52042), ACDS_MEGEL  (Q06319), 
ACOX4_ARATH (Q96329), ACRC_CLOPR  (G3KIM8), AIDB_ECOLI  (P33224), 
CAIA_CITK8  (A8ALR4), CAIA_ECO24  (A7ZHD0), CAIA_ECO27  (B7UI85), 
CAIA_ECO45  (B7MAG2), CAIA_ECO55  (B7L4G2), CAIA_ECO57  (P60586), 
CAIA_ECO5E  (B5YYD3), CAIA_ECO7I  (B7NHE3), CAIA_ECO81  (B7MNP6), 
CAIA_ECO8A  (B7M0D6), CAIA_ECOBW  (C4ZPW5), CAIA_ECODH  (B1XBG4), 
CAIA_ECOHS  (A7ZVY9), CAIA_ECOK1  (A1A789), CAIA_ECOL5  (Q0TLV0), 
CAIA_ECOL6  (P60585), CAIA_ECOLC  (B1IRD7), CAIA_ECOLI  (P60584), 
CAIA_ECOLU  (B7N7R4), CAIA_ECOSE  (B6HYZ0), CAIA_ECOSM  (B1LFX2), 
CAIA_ECOUT  (Q1RGF9), CAIA_ESCF3  (B7LWN0), CAIA_PROMH  (B4EY23), 
CAIA_PROSL  (Q8GB20), CAIA_SALA4  (B5F752), CAIA_SALAR  (A9MQH5), 
CAIA_SALCH  (Q57TI8), CAIA_SALDC  (B5FHG7), CAIA_SALEP  (B5R1R2), 
CAIA_SALG2  (B5RGA6), CAIA_SALHS  (B4TIH2), CAIA_SALNS  (B4T6J8), 
CAIA_SALPA  (Q5PIN6), CAIA_SALPB  (A9MYJ9), CAIA_SALPC  (C0Q4L5), 
CAIA_SALPK  (B5BL57), CAIA_SALSV  (B4TWR6), CAIA_SALTI  (Q8Z9L2), 
CAIA_SALTY  (Q8ZRX2), CAIA_SHIDS  (Q32K58), CAIA_SHIF8  (Q0T8F5), 
CAIA_SHIFL  (P60587), CAIA_SHISS  (Q3Z5W9), CH1CO_SYNAS (Q2LQN9), 
CHCOA_SYNAS (Q2LQP0), FADE_BACSU  (O32176), GCDH_BOVIN  (Q2KHZ9), 
GCDH_CAEEL  (Q20772), GCDH_DICDI  (Q54R47), GCDH_HUMAN  (Q92947), 
GCDH_MACFA  (Q8HXX8), GCDH_MOUSE  (Q60759), GCDH_PIG    (P81140), 
IVD_ARATH   (Q9SWG0), IVD_BOVIN   (Q3SZI8), IVD_CAEEL   (P34275), 
IVD_HUMAN   (P26440), IVD_MOUSE   (Q9JHI5), IVD_ORYSJ   (Q75IM9), 
IVD_PONAB   (Q5RBD5), IVD_RAT     (P12007), IVD_SOLTU   (Q9FS87), 
MBCD_SOLTU  (Q9FS88), YDIO_ECO57  (P0A9V0), YDIO_ECOL6  (P0A9U9), 
YDIO_ECOLI  (P0A9U8)
» More

UniProtKB/Swiss-Prot
False negative sequences
23 sequences

ACAD8_BOVIN (Q0NXR6), ACAD8_HUMAN (Q9UKU7), ACAD8_MOUSE (Q9D7B6), 
ACD10_HUMAN (Q6JQN1), ACD10_MOUSE (Q8K370), ACDC_MYCBO  (Q7U0Y2), 
ACDC_MYCTO  (P9WQG2), ACDC_MYCTU  (P9WQG3), ACDSB_BOVIN (Q5EAD4), 
ACDSB_DICDI (Q54RR5), ACD_DESML   (C3UVB0), BBSG_THAAR  (Q9KJE8), 
FADE_ECOLI  (Q47146), MBTN_MYCBO  (P63432), MBTN_MYCPA  (Q73ZP8), 
MBTN_MYCSS  (Q1BBA3), MBTN_MYCTO  (P9WQF8), MBTN_MYCTU  (P9WQF9), 
NAO_FUSOX   (Q8X1D8), Y873_MYCTO  (P9WQF6), Y873_MYCTU  (P9WQF7), 
Y897_MYCBO  (P63430), YDBM_BACSU  (P96608)
» More

UniProtKB/Swiss-Prot
False positive sequences
6 sequences

EIF3J_KLULA (Q6CMJ8), LAMB_SERP5  (A8GKC3), NCAP_ISAV8  (Q8V3T7), 
PP392_ARATH (Q3E9F0), PPR18_ARATH (Q9M9X9), SYL_EHRCR   (Q2GG41)
» More

PDB
[Detailed view]
24 PDB

1BUC; 1EGC; 1EGD; 1EGE; 1IVH; 1JQI; 1SIQ; 1SIR; 1T9G; 1UDY; 2A1T; 2IX5; 2IX6; 2JIF; 2R0M; 2R0N; 2UXW; 2VIG; 3B96; 3DJL; 3MDD; 3MDE; 3U33; 4P13
» More

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