Entry: PS00083

General information about the entry
Entry name INTRADIOL_DIOXYGENAS
Accession number PS00083
Entry type PATTERN
Date APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00079
Name and characterization of the entry
DescriptionIntradiol ring-cleavage dioxygenases signature.
Pattern [LIVMF]-x-G-x-[LIVM]-x(4)-[GS]-x(2)-[LIVMA]-x(4)-[LIVM]-[DE]-[LIVMFYC]- x(6)-G-x-[FY].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 19 hits in 19 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 19 hits in 19 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 4
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 17,iron
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CATA1_ACILW (O33948), CATA2_ACILW (O33950), CATA_ACIAD  (P07773), 
CATA_ACIGB  (Q43984), CATA_RHOOP  (P95607), CHQB_NOCSI  (Q5PXQ6), 
CLCA_PSEPU  (P11451), CLCA_RHOOP  (O67987), HQD2_CANAL  (P86029), 
PCXA_ACIAD  (P20371), PCXA_BURCE  (P15109), PCXA_PSEPU  (P00436), 
PCXB_ACIAD  (P20372), PCXB_BURCE  (P15110), PCXB_PSEPU  (P00437), 
PHEB_PSEUE  (P31019), TCBC_PSESQ  (P27098), TFDC_BURCE  (P0A397), 
TFDC_CUPPJ  (P0A396)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CATA_ACICA  (P83715), CATA_ACIRA  (P81422), TFDC1_DELAC (P83115), 
TFDC2_DELAC (P83116)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1DLM; 1DLQ; 1DLT; 1DMH; 1EO2; 1EO9; 1EOA; 1EOB; 1EOC; 1S9A; 1TMX; 1YKK; 1YKL; 1YKM; 1YKN; 1YKO; 1YKP; 2BUM; 2BUQ; 2BUR; 2BUT; 2BUU; 2BUV; 2BUW; 2BUX; 2BUY; 2BUZ; 2BV0; 2PCD; 3HGI; 3HHX; 3HHY; 3HJ8; 3HJQ; 3HJS; 3HKP; 3I4V; 3I4Y; 3I51; 3LKT; 3LMX; 3LXV; 3MFL; 3MI1; 3MI5; 3MV4; 3MV6; 3O32; 3O5U; 3O6J; 3O6R; 3PCA; 3PCB; 3PCC; 3PCD; 3PCE; 3PCF; 3PCG; 3PCH; 3PCI; 3PCJ; 3PCK; 3PCL; 3PCM; 3PCN; 3T63; 3T67; 3TH1;

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