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| Entry: PS00089 |
| General information about the entry | |
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| Entry name | RIBORED_LARGE |
| Accession number | PS00089 |
| Entry type | PATTERN |
| Date | APR-1990 (CREATED); DEC-2001 (DATA UPDATE); DEC-2011 (INFO UPDATE). |
| PROSITE Documentation | PDOC00084 |
| Name and characterization of the entry | |
| Description | Ribonucleotide reductase large subunit signature. |
| Pattern | W-x(2)-[LIVF]-x(6,7)-G-[LIVM]-[FYRA]-[NH]-x(3)-[STAQLIVM]-[ASC]-x(2)- [PA]. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:NRDEB_BACSU (O31875), NRDEB_BPSPB (O64173), RIR1A_MYCS2 (P0CG99), RIR1B_MYCS2 (P0CH00), RIR1_ALHV1 (O36411), RIR1_AQUAE (O66503), RIR1_ARATH (Q9SJ20), RIR1_ASFB7 (P42491), RIR1_ASFK5 (P0C8H7), RIR1_ASFM2 (P26685), RIR1_ASFP4 (P0C8H8), RIR1_ASFWA (P0C8H9), RIR1_BACSU (P50620), RIR1_BHV1C (P50646), RIR1_BPT4 (P32282), RIR1_BUCAI (P57276), RIR1_BUCAP (Q8K9W3), RIR1_BUCBP (Q89AS4), RIR1_CAEEL (Q03604), RIR1_CHLMU (Q9PL93), RIR1_CHLPN (Q9Z6S5), RIR1_CHLTR (O84834), RIR1_CRYPV (O61065), RIR1_DANRE (P79732), RIR1_DROME (P48591), RIR1_EBVA8 (P0C702), RIR1_EBVB9 (P03190), RIR1_EBVG (Q3KSU5), RIR1_ECOLI (P00452), RIR1_EHV1B (P28846), RIR1_EHV4 (P50642), RIR1_ENCCU (Q8SR37), RIR1_GAHVM (Q77MS1), RIR1_HAEIN (P43754), RIR1_HELPJ (Q9ZLF9), RIR1_HELPY (P55982), RIR1_HHV11 (P08543), RIR1_HHV23 (P09853), RIR1_HHV2H (P89462), RIR1_HHV6Z (Q9QJ39), RIR1_HUMAN (P23921), RIR1_MOUSE (P07742), RIR1_MYCBO (P0A5W9), RIR1_MYCGE (P47473), RIR1_MYCLE (Q9CBQ0), RIR1_MYCPN (P78027), RIR1_MYCTU (P0A5W8), RIR1_NEUCR (Q9UW15), RIR1_PLAF4 (P50648), RIR1_PLAFG (P50647), RIR1_PONAB (Q5R919), RIR1_PSHV1 (Q6UDJ2), RIR1_SALTY (P37426), RIR1_SCHPO (P36602), RIR1_SHV21 (Q01037), RIR1_SUHVK (P50643), RIR1_SYNY3 (P74240), RIR1_TREPA (O83972), RIR1_TRYBB (O15909), RIR1_VACCA (Q76RD8), RIR1_VACCC (P20503), RIR1_VACCW (P12848), RIR1_VAR67 (P32984), RIR1_VZVD (P09248), RIR1_VZVO (Q4JQV6), RIR1_YEAST (P21524), RIR3_ECOLI (P39452), RIR3_SALTY (Q08698), RIR3_YEAST (P21672), RRL_HCMVA (P16782), RRL_HHV6U (P52343), RRL_HHV7J (P50641)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): NRDZ_MYCTU (O53767), RIR1_IIV6 (O55716), RIR1_MIMIV (Q7T6Y8), RIR1_OSHVF (Q6R7H4)False positive hits (sequences which do not belong to the set under consideration): NQRB_HAEDU (Q7VNU8), NQRB_NEIMA (Q9JVP9), NQRB_NEIMB (Q9K0M4), NQRB_PASMU (Q9CLB0), NQRB_VIBAL (Q56587), NQRB_VIBAN (Q75R63), NQRB_VIBCH (Q9KPS2), NQRB_VIBHB (Q9RFW0), NQRB_VIBPA (Q87MA7), NQRB_VIBVU (Q8DBJ5), NQRB_VIBVY (Q7MIC8), NQRB_YERPE (Q8ZBZ1), Y058_METJA (Q60366)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] | 1PEM; 1PEO; 1PEQ; 1PEU; 1R1R; 1RLR; 1ZYZ; 1ZZD; 2BQ1; 2CVS; 2CVT; 2CVU; 2CVV; 2CVW; 2CVX; 2CVY; 2EUD; 2R1R; 2WGH; 2X0X; 2XAK; 2XAP; 2XAV; 2XAW; 2XAX; 2XAY; 2XAZ; 2XO4; 2XO5; 2ZLF; 2ZLG; 3HNC; 3HND; 3HNE; 3HNF; 3K8T; 3PAW; 3R1R; 4R1R; 5R1R; 6R1R; 7R1R; |
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