Entry: PS00093

General information about the entry

Entry name [info] N4_MTASE
Accession [info] PS00093
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00088

Name and characterization of the entry

Description [info] N-4 cytosine-specific DNA methylases signature.
Pattern [info]
[LIVMF]-T-S-P-P-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 13 in 13 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 60.61 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

MTA1_ANAVA  (P0A462), MTA1_NOSS1  (P0A461), MTB1_BACSQ  (Q9LAI2), 
MTB1_GEOSE  (P70986), MTB2_BACAM  (P18051), MTB2_BACIU  (Q45489), 
MTC1_CITFR  (Q04845), MTC9_CITFR  (P14243), MTHZ_METTF  (P29568), 
MTM1_METJA  (Q58392), MTM2_METJA  (Q58843), MTM5_METJA  (Q58893), 
MTM6_METJA  (Q58606), MTMV_KOCVA  (P14244), MTMW_METWO  (O59647), 
MTP2_PROHU  (P11409), MTS1_STRCS  (O52692), MTS1_STRFI  (O52513), 
MTSM_SERMA  (P14230), MTX1_XANCC  (P30774)
» More

UniProtKB/Swiss-Prot
False positive sequences
13 sequences

CABIN_HUMAN (Q9Y6J0), CABIN_RAT   (O88480), DEF45_ARATH (Q2V3Y8), 
GSH1_ONCVO  (Q9NFN6), MORN1_RAT   (Q641X6), POLN_ONNVG  (P13886), 
POLN_ONNVI  (O90370), POLN_ONNVS  (O90368), RAD16_SCHPO (P36617), 
SMKX_MOUSE  (Q8C0X8), WNK1_MOUSE  (P83741), Y1558_DICDI (Q1ZXI5), 
Y1671_HAEIN (P44287)
» More

PDB
[Detailed view]
1 PDB

1BOO

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