Entry: PS00093

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General information about the entry

Entry name [info] N4_MTASE
Accession [info] PS00093
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00088

Name and characterization of the entry

Description [info] N-4 cytosine-specific DNA methylases signature.
Pattern [info]
[LIVMF]-T-S-P-P-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits
Number of false positive hits 13 in 13 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 60.61 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

MTA1_ANAVA  (P0A462), MTA1_NOSS1  (P0A461), MTB1_BACSQ  (Q9LAI2), 
MTB1_GEOSE  (P70986), MTB2_BACAM  (P18051), MTB2_BACIU  (Q45489), 
MTC1_CITFR  (Q04845), MTC9_CITFR  (P14243), MTHZ_METTF  (P29568), 
MTM1_METJA  (Q58392), MTM2_METJA  (Q58843), MTM5_METJA  (Q58893), 
MTM6_METJA  (Q58606), MTMV_KOCVA  (P14244), MTMW_METWO  (O59647), 
MTP2_PROHU  (P11409), MTS1_STRCS  (O52692), MTS1_STRFI  (O52513), 
MTSM_SERMA  (P14230), MTX1_XANCC  (P30774)
» More

UniProtKB/Swiss-Prot
False positive sequences
13 sequences

CABIN_HUMAN (Q9Y6J0), CABIN_RAT   (O88480), DEF45_ARATH (Q2V3Y8), 
GSH1_ONCVO  (Q9NFN6), MORN1_RAT   (Q641X6), POLN_ONNVG  (P13886), 
POLN_ONNVI  (O90370), POLN_ONNVS  (O90368), RAD16_SCHPO (P36617), 
SMKX_MOUSE  (Q8C0X8), WNK1_MOUSE  (P83741), Y1558_DICDI (Q1ZXI5), 
Y1671_HAEIN (P44287)
» More

PDB
[Detailed view]
1 PDB

1BOO

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