Entry: PS00093

General information about the entry

Entry name [info] N4_MTASE
Accession [info] PS00093
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00088

Name and characterization of the entry

Description [info] N-4 cytosine-specific DNA methylases signature.
Pattern [info]
[LIVMF]-T-S-P-P-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 13 in 13 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 60.61 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

MTA1_ANAVA  (P0A462    ), MTA1_NOSS1  (P0A461    ), MTB1_BACSQ  (Q9LAI2    ), 
MTB1_GEOSE  (P70986    ), MTB2_BACAM  (P18051    ), MTB2_BACIU  (Q45489    ), 
MTC1_CITFR  (Q04845    ), MTC9_CITFR  (P14243    ), MTHZ_METTF  (P29568    ), 
MTM1_METJA  (Q58392    ), MTM2_METJA  (Q58843    ), MTM5_METJA  (Q58893    ), 
MTM6_METJA  (Q58606    ), MTMV_KOCVA  (P14244    ), MTMW_METWO  (O59647    ), 
MTP2_PROHU  (P11409    ), MTS1_STRCS  (O52692    ), MTS1_STRFI  (O52513    ), 
MTSM_SERMA  (P14230    ), MTX1_XANCC  (P30774    )
» more

UniProtKB/Swiss-Prot
False positive sequences
13 sequences

CABIN_HUMAN (Q9Y6J0    ), CABIN_RAT   (O88480    ), DEF45_ARATH (Q2V3Y8    ), 
GSH1_ONCVO  (Q9NFN6    ), MORN1_RAT   (Q641X6    ), POLN_ONNVG  (P13886    ), 
POLN_ONNVI  (O90370    ), POLN_ONNVS  (O90368    ), RAD16_SCHPO (P36617    ), 
SMKX_MOUSE  (Q8C0X8    ), WNK1_MOUSE  (P83741    ), Y1558_DICDI (Q1ZXI5    ), 
Y1671_HAEIN (P44287    )
» more

PDB
[Detailed view]
1 PDB

1BOO

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