Entry: PS00129

General information about the entry
Entry name GLYCOSYL_HYDROL_F31_1
Accession number PS00129
Entry type PATTERN
Date APR-1990 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00120
Associated ProRule PRU10066
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 31 active site.
Pattern [GFY]-[LIVMF]-W-x-D-M-[NSA]-E.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 50 hits in 45 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 50 hits in 45 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 11
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 81.97 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • `Interesting' site in the pattern: 5,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AGDC_ASPCL  (A1CNK4), AGDC_ASPFC  (B0XNL6), AGDC_ASPFN  (B8MZ41), 
AGDC_ASPFU  (Q4WRH9), AGDC_ASPOR  (Q2UQV7), AGDC_ASPTN  (Q0CMA7), 
AGDC_NEOFI  (A1D1E6), AGL2_BACTQ  (Q9F234), AGLU_ASPNG  (P56526), 
AGLU_ASPOR  (Q12558), AGLU_BETVU  (O04931), AGLU_CANTS  (P29064), 
AGLU_HORVU  (Q43763), AGLU_MUCJA  (Q92442), AGLU_ORYSJ  (Q653V7), 
AGLU_SCHPO  (Q9C0Y4), AGLU_SPIOL  (O04893), AGLU_SULS9  (D0KQM8), 
AGLU_SULSO  (P0CD66), AGLU_TETPY  (O00906), AMYG_CANAL  (O74254), 
AMYG_SCHOC  (P22861), GANAB_DICDI (Q94502), GANAB_HUMAN (Q14697), 
GANAB_MACFA (Q4R4N7), GANAB_MOUSE (Q8BHN3), GANAB_PIG   (P79403), 
GANC_HUMAN  (Q8TET4), GANC_MACFA  (Q9BE70), GANC_MOUSE  (Q8BVW0), 
GLU2A_YEAST (P38138), LYAG_BOVIN  (Q9MYM4), LYAG_HUMAN  (P10253), 
LYAG_MOUSE  (P70699), LYAG_PONAB  (Q5R7A9), LYAG_RAT    (Q6P7A9), 
MGAL1_HUMAN (Q6ZN80), MGA_HUMAN   (O43451), SUIS_HUMAN  (P14410), 
SUIS_RABIT  (P07768), SUIS_RAT    (P23739), SUIS_SUNMU  (O62653), 
XYL1_ARATH  (Q9S7Y7), XYL2_ARATH  (F4J6T7), YFZB_SCHPO  (Q9URX4)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AGDC_EMENI  (Q5AWI5), GLU2A_SCHPO (Q9US55), K1161_HUMAN (Q6NSJ0), 
K1161_MOUSE (Q69ZQ1), MGAL2_HUMAN (Q2M2H8), SP15_TORCA  (P19965), 
XYLS_ECOLI  (P31434), XYLS_SULSO  (Q9P999), YAJ1_SCHPO  (Q09901), 
YCR2_ESCVU  (Q01336), YIHQ_ECOLI  (P32138)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2G3M; 2G3N; 2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP; 3TON; 3TOP;

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