Entry: PS00158

General information about the entry
Entry name ALDOLASE_CLASS_I
Accession number PS00158
Entry type PATTERN
Date APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00143
Name and characterization of the entry
DescriptionFructose-bisphosphate aldolase class-I active site.
Pattern [LIVM]-x-[LIVMFYW]-E-G-x-[LSI]-L-K-[PA]-[SN].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 55 hits in 55 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 55 hits in 55 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 27
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 67.07 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 9,Schiff_base
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ALDCA_DANRE (Q4KMC8), ALDCB_DANRE (Q8JH70), ALDOA_HUMAN (P04075), 
ALDOA_MOUSE (P05064), ALDOA_PANTR (A5A6I5), ALDOA_PONAB (Q5NVR5), 
ALDOA_RABIT (P00883), ALDOA_RAT   (P05065), ALDOB_BOVIN (Q3T0S5), 
ALDOB_CHICK (P07341), ALDOB_DANRE (Q8JH71), ALDOB_HUMAN (P05062), 
ALDOB_MOUSE (Q91Y97), ALDOB_PONAB (Q5RFA6), ALDOB_RABIT (P79226), 
ALDOB_RAT   (P00884), ALDOB_SHEEP (P52210), ALDOB_SPAAU (P53447), 
ALDOC_CARAU (P53448), ALDOC_HUMAN (P09972), ALDOC_MACFA (Q9GKW3), 
ALDOC_MOUSE (P05063), ALDOC_PANTR (Q5R1X4), ALDOC_RAT   (P09117), 
ALF1_CAEEL  (P54216), ALF1_LAMJA  (P53445), ALF1_PEA    (P46256), 
ALF1_XANAC  (Q8PHB5), ALF1_XANCP  (Q8P5Z7), ALF1_XYLFA  (Q9PF52), 
ALF1_XYLFT  (Q87AI0), ALF2_CAEEL  (P46563), ALF2_LAMJA  (P53446), 
ALF2_PEA    (P46257), ALF2_PLABA  (P49577), ALFC1_ARATH (Q9SJU4), 
ALFC1_PEA   (Q01516), ALFC2_ARATH (Q944G9), ALFC2_PEA   (Q01517), 
ALFC3_ARATH (Q9ZU52), ALFC_ORYSJ  (Q40677), ALFC_SPIOL  (P16096), 
ALF_ARATH   (P22197), ALF_CICAR   (O65735), ALF_DICDI   (Q86A67), 
ALF_DROME   (P07764), ALF_ECHMU   (Q9GP32), ALF_LYMST   (P91759), 
ALF_MAIZE   (P08440), ALF_ORYSJ   (P17784), ALF_PLAF7   (Q7KQL9), 
ALF_PLAFA   (P14223), ALF_SCHMA   (P53442), ALF_SPIOL   (P29356), 
ALF_TRYBB   (P07752)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ALF1_CLOAB  (Q97TN4), ALF1_CLOB8  (A6LXU8), ALF1_FUSNN  (Q8RGH3), 
ALF1_OCEIH  (Q8ELI2), ALF1_PORG3  (B2RLG9), ALF1_PORGI  (P60053), 
ALF1_STAA1  (A7X6Y6), ALF1_STAA2  (A6U4Y6), ALF1_STAA3  (Q2FDQ4), 
ALF1_STAA8  (Q2FV17), ALF1_STAA9  (A5IW31), ALF1_STAAB  (Q2YWF3), 
ALF1_STAAC  (Q5HCU6), ALF1_STAAE  (A6QK93), ALF1_STAAM  (P67472), 
ALF1_STAAN  (P99117), ALF1_STAAR  (Q6GDJ7), ALF1_STAAS  (Q6G670), 
ALF1_STAAT  (A8Z3K5), ALF1_STAAW  (Q8NUM5), ALF1_STACT  (Q07159), 
ALF1_STAEQ  (Q5HL21), ALF1_STAES  (Q8CMY5), ALF1_STAHJ  (Q4L9B6), 
ALF1_SYNY3  (P74309), ALF1_TREDE  (Q73QV3), ALFC_CHLRE  (Q42690)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
ALDOC_CHICK (P53449), ALFC_PINST  (P84722)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1A5C; 1ADO; 1ALD; 1EWD; 1EX5; 1F2J; 1FBA; 1FDJ; 1J4E; 1N30; 1QO5; 1XDL; 1XDM; 1XFB; 1ZAH; 1ZAI; 1ZAJ; 1ZAL; 2ALD; 2EPH; 2OT0; 2OT1; 2PC4; 2QUT; 2QUU; 2QUV; 3B8D; 3BV4; 3DFN; 3DFO; 3DFP; 3DFQ; 3DFS; 3DFT; 3LGE; 3TU9; 4ALD; 6ALD;

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