Entry: PS00168

Forthcoming changes to the profile format
General information about the entry

Entry name [info] TRP_SYNTHASE_BETA
Accession [info] PS00168
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00152

Name and characterization of the entry

Description [info] Tryptophan synthase beta chain pyridoxal-phosphate attachment site.
Pattern [info]
[LIVMYAHQ]-x-[HPYNVF]-x-G-[STA]-H-K-x-N-x(2)-[LIVM]-x-[QEH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 451 in 451 different sequences
Number of true positive hits 451 in 451 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.56 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
451 sequences

TRBP2_ARATH (P25269), TRPB1_AERPE (Q9Y8T5), TRPB1_AQUAE (O66923), 
TRPB1_ARATH (P14671), TRPB1_ARCFU (O28672), TRPB1_CHLCV (Q822W9), 
TRPB1_COREF (Q8FLJ6), TRPB1_MAIZE (P43283), TRPB1_METAC (Q8TLP3), 
TRPB1_METMA (Q8PT95), TRPB1_METTH (O27696), TRPB1_NOSS1 (Q8YZP7), 
TRPB1_PYRAB (Q9V1G8), TRPB1_PYRFU (Q8U093), TRPB1_SULSO (P50383), 
TRPB1_SULTO (Q971Z5), TRPB1_THEKO (Q9YGB0), TRPB1_THEMA (P50909), 
TRPB1_VIBPA (P22097), TRPB1_WOLSU (Q7M9S1), TRPB2_AERPE (Q9Y9H2), 
TRPB2_AQUAE (O67409), TRPB2_ARCFU (O29028), TRPB2_CHLCV (Q822W3), 
TRPB2_COREF (Q8FT12), TRPB2_MAIZE (P43284), TRPB2_METAC (Q8TL44), 
TRPB2_METMA (Q8Q001), TRPB2_METTH (O27520), TRPB2_METTM (P26921), 
TRPB2_NOSS1 (Q8YQM6), TRPB2_PYRAB (Q9V150), TRPB2_PYRFU (Q8U0J5), 
TRPB2_SULSO (Q97TX6), TRPB2_SULTO (Q970N1), TRPB2_THEKO (Q5JDJ1), 
TRPB2_THEMA (Q9WZ09), TRPB2_VIBPA (Q87IM1), TRPB2_WOLSU (Q7M8W7), 
TRPB_ACIAC  (A1TLG8), TRPB_ACIAD  (Q6FEF1), TRPB_ACICA  (P16706), 
TRPB_ACICJ  (A5FY57), TRPB_ACIF2  (B7J4S9), TRPB_ACIF5  (B5EK18), 
TRPB_ACTP2  (A3MZI7), TRPB_ACTP7  (B3GX46), TRPB_ACTPJ  (B0BU72), 
TRPB_ACTSZ  (A6VPD9), TRPB_AERHH  (A0KMD0), TRPB_AERS4  (A4SKT1), 
TRPB_AGRRK  (B9JG43), TRPB_AGRT5  (Q8UJB0), TRPB_AGRVS  (B9JXV6), 
TRPB_ALBFT  (Q21XI6), TRPB_ALISL  (B6EJA3), TRPB_ALKMQ  (A6TM76), 
TRPB_ALTMD  (B4S1J4), TRPB_ANAVT  (Q3MBV3), TRPB_ANOFW  (B7GHQ9), 
TRPB_AZOPC  (B6YQ32), TRPB_AZOVD  (C1DH66), TRPB_BACA2  (A7Z616), 
TRPB_BACAA  (C3P3U0), TRPB_BACAC  (C3LAV8), TRPB_BACAH  (A0RB64), 
TRPB_BACAN  (Q81TL8), TRPB_BACC1  (Q73BQ7), TRPB_BACC2  (B7IM76), 
TRPB_BACC3  (C1ELF0), TRPB_BACC4  (B7HH01), TRPB_BACC7  (B7I0F2), 
TRPB_BACCQ  (B9IU38), TRPB_BACCR  (Q81GG5), TRPB_BACCZ  (Q63EC7), 
TRPB_BACFN  (Q5LBZ8), TRPB_BACFR  (Q64SX9), TRPB_BACHD  (Q9KCB0), 
TRPB_BACHK  (Q6HLU4), TRPB_BACLD  (Q65I35), TRPB_BACP2  (A8FEJ8), 
TRPB_BACSK  (Q5WGS1), TRPB_BACSU  (P07600), TRPB_BACTN  (Q8AAD2), 
TRPB_BACV8  (A6L7M5), TRPB_BACWK  (A9VJW2), TRPB_BEII9  (B2IF48), 
TRPB_BLOFL  (Q7VR00), TRPB_BLOPB  (Q492N6), TRPB_BORBR  (Q7WD04), 
TRPB_BORPA  (Q7W5G8), TRPB_BORPD  (A9IIE0), TRPB_BORPE  (Q7VTF1), 
TRPB_BRADU  (Q89WE5), TRPB_BRASB  (A5E8A4), TRPB_BRASO  (A4YJI6), 
TRPB_BRUA1  (B2S9A5), TRPB_BRUA2  (Q2YQW5), TRPB_BRUAB  (Q57AF0), 
TRPB_BRUC2  (A9M9U2), TRPB_BRUMB  (C0RFZ4), TRPB_BRUME  (Q8YE60), 
TRPB_BRUSI  (B0CJK8), TRPB_BRUSU  (Q8FXY4), TRPB_BUCAI  (Q44685), 
TRPB_BUCAP  (P42391), TRPB_BUCBP  (P59458), TRPB_BUCDN  (O68428), 
TRPB_BUCMH  (Q44687), TRPB_BUCSC  (Q59169), TRPB_CAMAC  (O50046), 
TRPB_CAMJ8  (A8FKD7), TRPB_CAMJD  (A7H523), TRPB_CAMJE  (Q9PIF2), 
TRPB_CAMJJ  (A1VY69), TRPB_CAMJR  (Q5HWB9), TRPB_CAUCR  (P12290), 
TRPB_CHESB  (Q11KK9), TRPB_CHLTE  (Q8KF11), TRPB_CHLTR  (O84172), 
TRPB_CHRVO  (Q7NUD8), TRPB_CITK8  (A8AG61), TRPB_CLAM3  (A5CRV6), 
TRPB_CLAMS  (B0REU1), TRPB_CLOAB  (Q97EF5), TRPB_CLOB8  (A6LU96), 
TRPB_CLOBA  (B2V2T4), TRPB_CLOBB  (B2TM49), TRPB_CLOK1  (B9E151), 
TRPB_CLOK5  (A5N7P0), TRPB_CLONN  (A0PYH3), TRPB_CORGB  (A4QI76), 
TRPB_CORGL  (P06561), TRPB_CROS8  (A7MMG1), TRPB_DECAR  (Q47HQ5), 
TRPB_DEIRA  (Q9RVT1), TRPB_DESK1  (B8D4P0), TRPB_DINSH  (A8LSF9), 
TRPB_ECO24  (A7ZL79), TRPB_ECO27  (B7UR67), TRPB_ECO45  (B7ML77), 
TRPB_ECO55  (B7L493), TRPB_ECO57  (Q8X7B6), TRPB_ECO5E  (B5YZP1), 
TRPB_ECO7I  (B7NVN1), TRPB_ECO81  (B7MUA0), TRPB_ECO8A  (B7LY17), 
TRPB_ECODH  (B1XBL0), TRPB_ECOHS  (A7ZZJ7), TRPB_ECOK1  (A1AAN1), 
TRPB_ECOL5  (Q0TIA9), TRPB_ECOL6  (Q8FHV9), TRPB_ECOLC  (B1ITJ4), 
TRPB_ECOLI  (P0A879), TRPB_ECOLU  (B7N474), TRPB_ECOSE  (B6I9X5), 
TRPB_ECOSM  (B1LH31), TRPB_ECOUT  (Q1RCA6), TRPB_EDWI9  (C5BDB7), 
TRPB_ELUMP  (B2KCI5), TRPB_ENT38  (A4WB02), TRPB_ERWT9  (B2VKT2), 
TRPB_ESCF3  (B7LS19), TRPB_EXIS2  (B1YLS4), TRPB_FERNB  (A7HMG8), 
TRPB_FRAP2  (B0TWI3), TRPB_FRAT1  (Q14FN2), TRPB_FRATF  (A7N9D2), 
TRPB_FRATH  (Q2A5V3), TRPB_FRATM  (B2SEK7), TRPB_FRATN  (A0Q8M6), 
TRPB_FRATO  (Q0BP45), TRPB_FRATT  (Q5NE79), TRPB_FRATW  (A4IVS4), 
TRPB_FUSNN  (Q8RGH8), TRPB_GEOSE  (P19868), TRPB_GEOTN  (A4IQ82), 
TRPB_GLOVI  (Q7NGX9), TRPB_HAEI8  (Q4QKF5), TRPB_HAEIE  (A5UC40), 
TRPB_HAEIG  (A5UEU5), TRPB_HAEIN  (P43760), TRPB_HALS3  (B0R332), 
TRPB_HALSA  (Q9HSC0), TRPB_HALVD  (P18285), TRPB_HELHP  (Q7VGA7), 
TRPB_HELPJ  (Q9ZJU9), TRPB_HELPY  (P56142), TRPB_HISS2  (B0UU34), 
TRPB_JANSC  (Q28LA6), TRPB_KLEP3  (B5XT02), TRPB_KLEP7  (A6T7W6), 
TRPB_KORVE  (Q1ISI9), TRPB_LACC3  (Q03CY3), TRPB_LACCA  (P17167), 
TRPB_LACCB  (B3W6W6), TRPB_LACLA  (Q01998), TRPB_LACLM  (A2RK24), 
TRPB_LACLS  (Q02YB7), TRPB_LACPL  (Q88WI0), TRPB_LEGPA  (Q5X5Q2), 
TRPB_LEGPC  (A5IBF7), TRPB_LEGPH  (Q5ZVY4), TRPB_LEGPL  (Q5WX32), 
TRPB_LEIXX  (Q6AF67), TRPB_LEPBA  (B0SDM8), TRPB_LEPBJ  (Q04U63), 
TRPB_LEPBL  (Q053M6), TRPB_LEPBP  (B0SM57), TRPB_LEPCP  (B1XY48), 
TRPB_LEPIC  (Q72U05), TRPB_LEPIN  (Q8F149), TRPB_LISIN  (Q92B81), 
TRPB_LISMC  (C1KVS5), TRPB_LISMF  (Q71Z40), TRPB_LISMH  (B8DHB4), 
TRPB_LISMO  (Q8Y6Q6), TRPB_LISW6  (A0AJ80), TRPB_MANSM  (Q65TF0), 
TRPB_METC4  (B7L1H4), TRPB_METCA  (Q604P3), TRPB_METFK  (Q1H0M1), 
TRPB_METJA  (Q60179), TRPB_METKA  (Q8TX91), TRPB_METLZ  (A2STA4), 
TRPB_METNO  (B8I9V8), TRPB_METPB  (B1ZG57), TRPB_METPP  (A2SHS4), 
TRPB_METRJ  (B1LSI6), TRPB_METS4  (B0UIA8), TRPB_METVO  (P14638), 
TRPB_MYCBO  (P66985), TRPB_MYCIT  (O68905), TRPB_MYCLE  (Q9CC54), 
TRPB_MYCTO  (P9WFX8), TRPB_MYCTU  (P9WFX9), TRPB_NEIG1  (Q5F9W3), 
TRPB_NEIG2  (B4RJV8), TRPB_NEIGO  (Q84GJ9), TRPB_NEIM0  (A9M354), 
TRPB_NEIMA  (Q9JVC0), TRPB_NEIMB  (Q9K0B5), TRPB_NEIMF  (A1KSW2), 
TRPB_NITEC  (Q0AGX5), TRPB_NITEU  (Q82WI2), TRPB_NITMU  (Q2Y7R4), 
TRPB_NOVAD  (Q2G8S7), TRPB_OCEIH  (Q8ESU4), TRPB_OCHA4  (A6WX28), 
TRPB_OLICO  (B6JCP2), TRPB_PARD8  (A6L9K4), TRPB_PARDP  (A1B8L3), 
TRPB_PARL1  (A7HPD3), TRPB_PASMU  (P54203), TRPB_PECAS  (Q6D4U0), 
TRPB_PECCP  (C6DGZ5), TRPB_PHEZH  (B4RCL0), TRPB_PHOLL  (Q7N486), 
TRPB_PHOPR  (Q6LPA4), TRPB_POLNA  (A1VRR7), TRPB_POLSJ  (Q126M1), 
TRPB_PROM0  (A3PAN2), TRPB_PROM1  (A2BZZ2), TRPB_PROM2  (A8G2H0), 
TRPB_PROM4  (A9BD24), TRPB_PROM5  (A2BUE1), TRPB_PROM9  (Q31D17), 
TRPB_PROMA  (Q7VE26), TRPB_PROMH  (B4EWH7), TRPB_PROMM  (Q7TUL2), 
TRPB_PROMP  (Q7TUH0), TRPB_PROMS  (A2BNV9), TRPB_PROMT  (Q46HK9), 
TRPB_PSE14  (Q48QG6), TRPB_PSEA6  (Q15RZ5), TRPB_PSEAE  (P07345), 
TRPB_PSEE4  (Q1IH20), TRPB_PSEF5  (Q4KKP4), TRPB_PSEP1  (A5VWL3), 
TRPB_PSEPF  (Q3KK59), TRPB_PSEPG  (B0KFW3), TRPB_PSEPK  (Q88RP6), 
TRPB_PSEPU  (P11080), TRPB_PSEPW  (B1J4B1), TRPB_PSESH  (Q849P2), 
TRPB_PSESM  (Q88B61), TRPB_PSESY  (P34817), TRPB_PSEU2  (Q500R4), 
TRPB_PSYIN  (A1STT0), TRPB_PYRAE  (Q8ZV44), TRPB_PYRAR  (A4WKQ9), 
TRPB_PYRHO  (O59265), TRPB_PYRIL  (A1RVT1), TRPB_RALSO  (Q8XXY0), 
TRPB_RHIE6  (B3PVV2), TRPB_RHIEC  (Q2KE82), TRPB_RHIL3  (Q1MND6), 
TRPB_RHILO  (Q98CN7), TRPB_RHILW  (B5ZV70), TRPB_RHIME  (Q92TC9), 
TRPB_RHISN  (C3MB99), TRPB_RHOBA  (Q7UKG9), TRPB_RHOP2  (Q2J2G4), 
TRPB_RHOP5  (Q07UH1), TRPB_RHOPA  (Q6NDN6), TRPB_RHOPB  (Q21CB9), 
TRPB_RHOPS  (Q13EQ2), TRPB_RHOPT  (B3Q605), TRPB_RHOS4  (Q9X4E5), 
TRPB_ROSDO  (Q161H9), TRPB_RUEPO  (Q5LV94), TRPB_RUEST  (Q1GK77), 
TRPB_RUTMC  (A1AXS9), TRPB_SALA4  (B5F4M4), TRPB_SALAR  (A9MPY7), 
TRPB_SALCH  (Q57NT3), TRPB_SALDC  (B5FU66), TRPB_SALEP  (B5R3P4), 
TRPB_SALG2  (B5R6M5), TRPB_SALHS  (B4TJK8), TRPB_SALNS  (B4T6X1), 
TRPB_SALPA  (Q5PD17), TRPB_SALPB  (A9MWR4), TRPB_SALPC  (C0Q3N4), 
TRPB_SALPK  (B5BIC1), TRPB_SALSV  (B4TX38), TRPB_SALTI  (P0A2K2), 
TRPB_SALTY  (P0A2K1), TRPB_SERP5  (A8GF82), TRPB_SHEAM  (A1S7I2), 
TRPB_SHEB5  (A3D630), TRPB_SHEB8  (A6WPX1), TRPB_SHEB9  (A9KTR7), 
TRPB_SHEDO  (Q12LE2), TRPB_SHEFN  (Q084N8), TRPB_SHEHH  (B0TP63), 
TRPB_SHELP  (A3QF73), TRPB_SHEON  (Q8ECV0), TRPB_SHEPA  (A8H2X4), 
TRPB_SHEPC  (A4Y845), TRPB_SHEPW  (B8CLM6), TRPB_SHESA  (A0KVD1), 
TRPB_SHESM  (Q0HK81), TRPB_SHESR  (Q0HWI3), TRPB_SHESW  (A1RIE3), 
TRPB_SHEWM  (B1KK02), TRPB_SHIB3  (B2U0F2), TRPB_SHIBS  (Q31ZV4), 
TRPB_SHIDS  (Q32GS9), TRPB_SHIF8  (Q0T5D5), TRPB_SHIFL  (P0A880), 
TRPB_SHISS  (Q3Z109), TRPB_SINMW  (A6UEI1), TRPB_SODGM  (Q2NT52), 
TRPB_STAA1  (A7X238), TRPB_STAA2  (A6U1J4), TRPB_STAA3  (Q2FH64), 
TRPB_STAA8  (Q2FYR4), TRPB_STAA9  (A5ISQ4), TRPB_STAAB  (Q2YXX2), 
TRPB_STAAC  (Q5HG47), TRPB_STAAE  (A6QGS4), TRPB_STAAM  (P66986), 
TRPB_STAAN  (P66987), TRPB_STAAR  (Q6GH33), TRPB_STAAS  (Q6G9I7), 
TRPB_STAAT  (A8Z244), TRPB_STAAW  (Q8NWU2), TRPB_STAEQ  (Q5HPH0), 
TRPB_STAES  (Q8CPB1), TRPB_STAS1  (Q49XH8), TRPB_STRAW  (Q82A82), 
TRPB_STRCO  (O05625), TRPB_STRGG  (B1W0P0), TRPB_STRM5  (B4SQU8), 
TRPB_STRMK  (B2FNZ1), TRPB_STRMU  (Q8DVF3), TRPB_STRP2  (Q04IY9), 
TRPB_STRP4  (B5E7M3), TRPB_STRP7  (C1C966), TRPB_STRPI  (B1I7S7), 
TRPB_STRPJ  (B8ZN59), TRPB_STRPN  (Q97P32), TRPB_STRPS  (B2ISS1), 
TRPB_STRR6  (Q8DNM8), TRPB_STRT1  (Q5LYI7), TRPB_STRT2  (Q5M350), 
TRPB_STRTD  (Q03JC1), TRPB_STRZJ  (C1CG42), TRPB_STRZP  (C1CMD3), 
TRPB_STRZT  (C1CT51), TRPB_SULSY  (B2V8W5), TRPB_SYNJB  (Q2JLD7), 
TRPB_SYNPW  (A5GP60), TRPB_SYNPX  (Q7TTS6), TRPB_SYNS3  (Q0I6V1), 
TRPB_SYNS9  (Q3AW11), TRPB_SYNSC  (Q3AGY2), TRPB_SYNY3  (Q59992), 
TRPB_THEAB  (B7IHA8), TRPB_THEAC  (Q9HKD2), TRPB_THEEB  (Q8DG49), 
TRPB_THEGJ  (C5A1P4), TRPB_THELT  (A8F8F7), TRPB_THEON  (B6YSU5), 
TRPB_THEP3  (B0K8T6), TRPB_THEPX  (B0K2T9), TRPB_THET2  (P16609), 
TRPB_THET8  (Q5SJB9), TRPB_THETN  (Q8R9M9), TRPB_THEVO  (Q97A51), 
TRPB_THIDA  (Q3SHL9), TRPB_TOLAT  (C4LC89), TRPB_TRIEI  (Q118P8), 
TRPB_VEREI  (A1WSF1), TRPB_VESOH  (A5CVH4), TRPB_VIBC3  (A5F208), 
TRPB_VIBCB  (A7MRY0), TRPB_VIBCH  (Q9KST6), TRPB_VIBCM  (C3LLL6), 
TRPB_VIBF1  (Q5E623), TRPB_VIBFM  (B5FDB7), TRPB_VIBME  (Q9RCE8), 
TRPB_VIBSL  (B7VGU7), TRPB_VIBVU  (Q8D8B2), TRPB_VIBVY  (Q7MM56), 
TRPB_XANAC  (Q8PJ28), TRPB_XANC5  (Q3BRL3), TRPB_XANC8  (Q4UWD2), 
TRPB_XANCB  (B0RR84), TRPB_XANCP  (Q8P7R8), TRPB_XANOM  (Q2P0U2), 
TRPB_XANOP  (B2SVN7), TRPB_XYLF2  (B2I9J2), TRPB_XYLFA  (Q9PDK4), 
TRPB_XYLFM  (B0U6K6), TRPB_XYLFT  (Q87DR9), TRPB_YERE8  (A1JPX6), 
TRPB_YERP3  (A7FI33), TRPB_YERPA  (Q1C7P2), TRPB_YERPB  (B2K3W2), 
TRPB_YERPE  (Q8ZEG9), TRPB_YERPN  (Q1CJ28), TRPB_YERPP  (A4TJ67), 
TRPB_YERPS  (Q66AK4), TRPB_YERPY  (B1JKS2), TRP_COPC7   (A8NEP3), 
TRP_COPCI   (P16578), TRP_NEUCR   (P13228), TRP_SCHPO   (O13831), 
TRP_YEAST   (P00931)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

TRPB_META3  (A6UW25), TRPB_PICTO  (Q6L271)

		
UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

TRPB_BUCRM  (Q44686), TRPB_BUCRP  (Q44688), TRPB_ENTAE  (P14552)

		
PDB
[Detailed view]
59 PDB

1A50; 1A5A; 1A5B; 1A5S; 1BEU; 1BKS; 1C29; 1C8V; 1C9D; 1CW2; 1CX9; 1FUY; 1K3U; 1K7E; 1K7F; 1K7X; 1K8X; 1K8Y; 1K8Z; 1KFB; 1KFC; 1KFE; 1KFJ; 1KFK; 1QOP; 1QOQ; 1TJP; 1TTP; 1TTQ; 1V8Z; 1WBJ; 1WDW; 1X1Q; 2CLE; 2CLF; 2CLH; 2CLI; 2CLK; 2CLL; 2CLM; 2CLO; 2DH5; 2DH6; 2J9X; 2J9Y; 2J9Z; 2O2E; 2O2J; 2RH9; 2RHG; 2WSY; 3CEP; 3PR2; 4HN4; 4HPJ; 4HPX; 4HT3; 4KKX; 4NEG
» More

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View entry in raw text format (no links)
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