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| Entry: PS00170 |
| General information about the entry | |
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| Entry name | CSA_PPIASE_1 |
| Accession number | PS00170 |
| Entry type | PATTERN |
| Date | APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00154 |
| Name and characterization of the entry | |
| Description | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. |
| Pattern | [FY]-x(2)-[STCNLVA]-x-[FV]-H-[RH]-[LIVMNS]-[LIVM]-x(2)-F-[LIVM]-x-Q- [AGFT]-G. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:CP18C_ARATH (P34790), CP18D_ARATH (Q42406), CP19A_ARATH (Q38900), CP19B_ARATH (Q9SKQ0), CP19C_ARATH (Q38867), CP19D_ARATH (Q8LDP4), CP20A_ARATH (Q9SP02), CP20B_ARATH (Q9ASS6), CP20C_ARATH (P34791), CWC27_ASPFU (Q4WE62), CWC27_BOVIN (Q17QX9), CWC27_DANRE (Q7ZW86), CWC27_EMENI (Q5AUG9), CWC27_GIBZE (Q4IPB3), CWC27_HUMAN (Q6UX04), CWC27_MACFA (Q4R713), CWC27_MOUSE (Q3TKY6), CWC27_NEUCR (Q7SBX8), CWC27_PONAB (Q5R7W3), CWC27_RAT (Q5XIB2), CWC27_RHIO9 (P0C1J2), CWC27_USTMA (Q4P7H2), CWC27_XENLA (Q6GLX7), CYP10_CAEEL (P52017), CYP11_CAEEL (P52018), CYP11_RHIO9 (P0C1I9), CYP15_RHIO9 (P0C1J0), CYP1_BRUMA (Q27450), CYP1_CAEEL (P52009), CYP1_SOYBN (Q8W171), CYP2_CAEEL (P52010), CYP3_CAEEL (P52011), CYP40_ARATH (Q9C566), CYP4_CAEEL (P52012), CYP5_CAEEL (P52013), CYP5_RHIO9 (P0C1I7), CYP6_CAEEL (P52014), CYP6_RHIO9 (P0C1I8), CYP7_CAEEL (P52015), CYP7_SCHPO (O42941), CYP7_YEAST (P47103), CYP8_CAEEL (P52016), CYP9_CAEEL (Q09637), CYP9_SCHPO (O74942), CYPB_VICFA (Q41651), CYPB_YEAST (P23285), CYPC_YEAST (P25719), CYPD_YEAST (P35176), CYPE_DICDI (Q9NI62), CYPH_ALLCE (P34887), CYPH_BRANA (P24525), CYPH_CATRO (Q39613), CYPH_ENCCU (Q8SRE1), CYPH_LUPLU (O49886), CYPH_MAIZE (P21569), CYPH_NEUCR (P10255), CYPH_SCHPO (P18253), CYPH_SOLLC (P21568), CYPH_UROFA (O00060), CYPH_YEAST (P14832), CYPR_CALVI (P28517), CYPR_DROME (P15425), CYPX_USEUD (P35627), NKTR_HUMAN (P30414), NKTR_MOUSE (P30415), PAL4A_HUMAN (Q9Y536), PAL4D_HUMAN (F5H284), PAL4G_HUMAN (A2BFH1), PPI1_BRUA2 (Q2YPY5), PPI1_BRUAB (Q57D43), PPI1_BRUME (Q8YHB5), PPI1_BRUSU (Q8G0J9), PPI1_STAEQ (Q5HQK8), PPI1_STAES (Q8CT84), PPI1_STAS1 (Q49W93), PPI1_SYNY3 (P72704), PPI2_SYNY3 (P73789), PPIA1_RHIO9 (P0C1H7), PPIA2_RHIO9 (P0C1H8), PPIA_ACIAD (P42693), PPIA_AOTTR (Q6DTV9), PPIA_BLAGE (P54985), PPIA_BOVIN (P62935), PPIA_CANAL (P22011), PPIA_CHLAE (P62938), PPIA_CRIGR (P14851), PPIA_DICD3 (O53021), PPIA_DICDI (Q54SM3), PPIA_DROME (P25007), PPIA_ECHGR (P14088), PPIA_ECO57 (P0AFL5), PPIA_ECOL6 (P0AFL4), PPIA_ECOLI (P0AFL3), PPIA_FELCA (Q8HXS3), PPIA_GORGO (Q0ZQL0), PPIA_HELPJ (Q9ZJH5), PPIA_HELPY (O25982), PPIA_HEMPU (P91791), PPIA_HUMAN (P62937), PPIA_HYLLA (Q0ZQK8), PPIA_HYLSY (Q0ZQK6), PPIA_MACMU (P62940), PPIA_MOUSE (P17742), PPIA_MYCBO (P65763), PPIA_MYCLE (Q9CDE9), PPIA_MYCTU (P65762), PPIA_NEOCA (P84343), PPIA_NOMLE (Q0ZQK7), PPIA_PANPA (Q0ZQL2), PPIA_PANTR (Q0ZQL1), PPIA_PAPAN (P62941), PPIA_PARPR (O00845), PPIA_PIG (P62936), PPIA_PONPY (Q5R8S7), PPIA_PSEAE (Q59641), PPIA_RABIT (Q9TTC6), PPIA_RAT (P10111), PPIA_SAGOE (Q0ZQK3), PPIA_SALTY (P20753), PPIA_SCHMA (Q26565), PPIA_STRAQ (Q06118), PPIB1_RHIO9 (P0C1H9), PPIB2_RHIO9 (P0C1I0), PPIB_ARTBE (O93826), PPIB_ASPFU (Q4WP12), PPIB_ASPNG (Q8X166), PPIB_ASPOR (Q2UGK2), PPIB_BACSU (P35137), PPIB_BOVIN (P80311), PPIB_CHICK (P24367), PPIB_CRYNB (P0CP79), PPIB_CRYNJ (P0CP78), PPIB_DICDI (Q9TW32), PPIB_ECOLI (P23869), PPIB_EMENI (Q5B4R3), PPIB_GIBZE (Q4I5R9), PPIB_HAEIN (P44499), PPIB_HUMAN (P23284), PPIB_MOUSE (P24369), PPIB_NEUCR (Q7S7Z6), PPIB_ORPSP (Q01490), PPIB_RAT (P24368), PPIB_SCHJA (Q27774), PPIB_SCHMA (Q26551), PPIB_SCHPO (O94273), PPIB_STRAQ (P77949), PPIB_STRAT (P83221), PPIB_TREPA (O66105), PPIB_YARLI (Q6C4W6), PPIC_BOVIN (Q08E11), PPIC_HUMAN (P45877), PPIC_MOUSE (P30412), PPID_AMAMU (Q5U8Z7), PPID_ASHGO (Q75A33), PPID_ASPFU (Q4WIF3), PPID_ASPOR (Q2U0E0), PPID_BOVIN (P26882), PPID_CANAL (Q5ACI8), PPID_CANGA (Q6FNU6), PPID_DEBHA (Q6BXZ7), PPID_DICDI (Q9UA41), PPID_EMENI (Q5B4E7), PPID_GIBZE (Q4HXF6), PPID_HUMAN (Q08752), PPID_KLULA (Q6CL78), PPID_MOUSE (Q9CR16), PPID_NEUCR (Q9P3X9), PPID_RAT (Q6DGG0), PPID_RHIO9 (P0C1I1), PPID_SCHPO (Q11004), PPID_USTMA (Q4P0V4), PPID_YARLI (Q6CBP4), PPID_YEAST (P53691), PPIE_BOVIN (A4FV72), PPIE_DROME (Q9V3G3), PPIE_HUMAN (Q9UNP9), PPIE_MOUSE (Q9QZH3), PPIE_PONAB (Q5R723), PPIE_RHIO9 (P0C1I2), PPIE_SCHJA (Q26516), PPIE_SCHMA (Q26548), PPIF_BOVIN (P30404), PPIF_HUMAN (P30405), PPIF_MOUSE (Q99KR7), PPIF_RAT (P29117), PPIG_HUMAN (Q13427), PPIG_MOUSE (A2AR02), PPIG_RAT (O55035), PPIH_ASPFU (Q4WCM6), PPIH_ASPOR (Q2TZ33), PPIH_BOVIN (Q0P5D0), PPIH_CRYNB (P0CP83), PPIH_CRYNJ (P0CP82), PPIH_EMENI (Q5AQL0), PPIH_GIBZE (Q4IPH4), PPIH_HUMAN (O43447), PPIH_MOUSE (Q9D868), PPIH_NEUCR (Q7SG06), PPIH_RHIO9 (P0C1I3), PPIH_SCHPO (O74729), PPIH_USTMA (Q4P6X6), PPIL1_ASPFU (Q4WCR3), PPIL1_ASPNG (Q8X191), PPIL1_ASPOR (Q2U6U0), PPIL1_BOVIN (Q5E992), PPIL1_CRYNB (P0CP85), PPIL1_CRYNJ (P0CP84), PPIL1_EMENI (Q5ASQ0), PPIL1_GIBZE (Q4I1Y1), PPIL1_HUMAN (Q9Y3C6), PPIL1_MOUSE (Q9D0W5), PPIL1_NEUCR (Q7SF72), PPIL1_RHIO9 (P0C1I4), PPIL1_SCHPO (P87051), PPIL2_ARATH (Q9FJX0), PPIL2_ASPFU (Q4WVU5), PPIL2_ASPOR (Q2U5W8), PPIL2_CRYNB (P0CP91), PPIL2_CRYNJ (P0CP90), PPIL2_EMENI (Q5AXT6), PPIL2_GIBZE (Q4IBK5), PPIL2_HUMAN (Q13356), PPIL2_MOUSE (Q9D787), PPIL2_NEUCR (Q7RXA6), PPIL2_RHIO9 (P0C1J1), PPIL2_SCHPO (Q09928), PPIL2_USTMA (Q4P555), PPIL3_CHICK (Q5ZLV2), PPIL3_CRYNB (P0CP87), PPIL3_CRYNJ (P0CP86), PPIL3_DICDI (Q54E95), PPIL3_EMENI (Q5BAH7), PPIL3_GIBZE (Q4IPB8), PPIL3_HUMAN (Q9H2H8), PPIL3_MOUSE (Q9D6L8), PPIL3_NEUCR (Q6MWS8), PPIL3_RAT (Q812D3), PPI_LOTGI (B3A0R0), PPI_SYNE7 (P29820), RBP2_BOVIN (P48820), RBP2_HUMAN (P49792), RBP2_MOUSE (Q9ERU9)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): BPPI_STRP6 (Q5XAQ1), CP21C_ARATH (Q94A16), CWC27_ASHGO (Q75A74), CWC27_CRYNB (P0CP93), CWC27_CRYNJ (P0CP92), CWC27_DEBHA (Q6BWH6), CWC27_YARLI (Q6CGK4), CWC27_YEAST (Q02770), CYP37_ARATH (P82869), CYP38_ARATH (Q9SSA5), CYP8_YEAST (P53728), CYP9_CAEBR (A8X8D0), CYPR_YEAST (P25334), PPI1_STAA3 (Q2FIC1), PPI1_STAA8 (Q2FZU9), PPI1_STAAB (Q2YWT2), PPI1_STAAC (Q5HHD1), PPI1_STAAM (Q99VD4), PPI1_STAAN (Q7A6I1), PPI1_STAAR (Q6GID4), PPI1_STAAS (Q6GAX2), PPI1_STAAW (Q7A1C0), PPI1_STAHJ (Q4L4W9), PPI3_SYNY3 (Q55118), PPIB_MYCLE (P46697), PPIB_MYCTU (Q50639), PPID_CRYNB (P0CP81), PPID_CRYNJ (P0CP80), PPIL3_RHIO9 (P0C1I5), PPIL3_USTMA (Q4PCH8), PPIL4_ASPFU (Q4WAQ9), PPIL4_ASPOR (Q2U256), PPIL4_CRYNB (P0CP89), PPIL4_CRYNJ (P0CP88), PPIL4_EMENI (Q5ARI5), PPIL4_GIBZE (Q4IE79), PPIL4_HUMAN (Q8WUA2), PPIL4_MOUSE (Q9CXG3), PPIL4_NEUCR (Q871A4), PPIL4_RHIO9 (P0C1I6), PPIL4_SCHPO (Q9UUE4), PPIL4_USTMA (P0C196), PPIL6_BOVIN (Q1RMP7), PPIL6_HUMAN (Q8IXY8), PPIL6_MOUSE (Q9D6D8), PPWD1_BOVIN (Q29RZ2), PPWD1_HUMAN (Q96BP3), PPWD1_MOUSE (Q8CEC6), PPWD1_PONAB (Q5NVL7), TLP40_SPIOL (O49939)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): CYPH_BETPN (P81531), PPIA_NAEFO (P84342), PPIA_PENGL (P85444), PPIM_MAIZE (Q10724), TLP20_SPIOL (P82536)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1A33; 1A58; 1AK4; 1AWQ; 1AWR; 1AWU; 1AWV; 1BCK; 1C5F; 1CLH; 1CWA; 1CWB; 1CWC; 1CWF; 1CWH; 1CWI; 1CWJ; 1CWK; 1CWL; 1CWM; 1CWO; 1CYN; 1DYW; 1E3B; 1E8K; 1FGL; 1H0P; 1IHG; 1IIP; 1IST; 1J2A; 1LOP; 1M63; 1M9C; 1M9D; 1M9E; 1M9F; 1M9X; 1M9Y; 1MD5; 1MF8; 1MIK; 1MZW; 1NMK; 1OCA; 1QOI; 1RMH; 1V9T; 1VAI; 1VBS; 1VBT; 1VDN; 1W74; 1W8L; 1W8M; 1W8V; 1WVS; 1XWN; 1XYH; 1YND; 1ZKC; 1ZKF; 1ZMF; 2ALF; 2BIT; 2BIU; 2CK1; 2CMT; 2CPL; 2CYH; 2ESL; 2GW2; 2HE9; 2HQ6; 2IGV; 2IGW; 2K7N; 2NUL; 2OJU; 2OK3; 2R99; 2RMA; 2RMB; 2RMC; 2RS4; 2WFJ; 2WLW; 2X25; 2X2A; 2X2C; 2X2D; 2X7K; 2XGY; 2Z6W; 3CYH; 3CYS; 3ICH; 3ICI; 3K0M; 3K0N; 3K0O; 3K0P; 3K0Q; 3K2C; 3ODI; 3ODL; 3QYU; 3R49; 3R4G; 3R54; 3R56; 3R57; 3R59; 3RCF; 3RCG; 3RCI; 3RCK; 3RCL; 3RD9; 3RDA; 3RDB; 3RDC; 3RDD; 4CYH; 4DGA; 4DGB; 4DGC; 4DGD; 4DGE; 4I9Y; 5CYH; |
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