Entry: PS00170

General information about the entry

Entry name [info] CSA_PPIASE_1
Accession [info] PS00170
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00154

Name and characterization of the entry

Description [info] Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.
Pattern [info]
[FY]-x(2)-[STCNLVA]-x-[FV]-H-[RH]-[LIVMNS]-[LIVM]-x(2)-F-[LIVM]-x-Q-
[AGFT]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 255 in 255 different sequences
Number of true positive hits 255 in 255 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 60
Number of 'partial' sequences 5
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.95 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
255 sequences

CP18A_ARATH (Q9LPC7    ), CP18B_ARATH (Q9SIH1    ), CP18C_ARATH (P34790    ), 
CP18D_ARATH (Q42406    ), CP19A_ARATH (Q38900    ), CP19B_ARATH (Q9SKQ0    ), 
CP19C_ARATH (Q38867    ), CP19D_ARATH (Q8LDP4    ), CP20A_ARATH (Q9SP02    ), 
CP20C_ARATH (P34791    ), CP21A_ARATH (O49605    ), CP21B_ARATH (Q8L8W5    ), 
CPY57_ARATH (Q6Q152    ), CWC27_ASPFU (Q4WE62    ), CWC27_BOVIN (Q17QX9    ), 
CWC27_DANRE (Q7ZW86    ), CWC27_EMENI (Q5AUG9    ), CWC27_GIBZE (Q4IPB3    ), 
CWC27_HUMAN (Q6UX04    ), CWC27_MACFA (Q4R713    ), CWC27_MOUSE (Q3TKY6    ), 
CWC27_NEUCR (Q7SBX8    ), CWC27_PONAB (Q5R7W3    ), CWC27_RAT   (Q5XIB2    ), 
CWC27_RHIO9 (P0C1J2    ), CWC27_USTMA (Q4P7H2    ), CWC27_XENLA (Q6GLX7    ), 
CYP10_CAEEL (P52017    ), CYP11_CAEEL (P52018    ), CYP11_RHIO9 (P0C1I9    ), 
CYP15_RHIO9 (P0C1J0    ), CYP1_BRUMA  (Q27450    ), CYP1_CAEEL  (P52009    ), 
CYP1_SOYBN  (Q8W171    ), CYP2_CAEEL  (P52010    ), CYP3_CAEEL  (P52011    ), 
CYP40_ARATH (Q9C566    ), CYP5_CAEEL  (P52013    ), CYP5_RHIO9  (P0C1I7    ), 
CYP63_ARATH (Q9LY75    ), CYP6_CAEEL  (P52014    ), CYP6_RHIO9  (P0C1I8    ), 
CYP7_CAEEL  (P52015    ), CYP7_SCHPO  (O42941    ), CYP7_YEAST  (P47103    ), 
CYP8_CAEEL  (P52016    ), CYP9_CAEEL  (Q09637    ), CYP9_SCHPO  (O74942    ), 
CYPB_ARTBC  (D4AY02    ), CYPB_VICFA  (Q41651    ), CYPB_YEAST  (P23285    ), 
CYPC_YEAST  (P25719    ), CYPD_YEAST  (P35176    ), CYPE_DICDI  (Q9NI62    ), 
CYPH_ALLCE  (P34887    ), CYPH_BRANA  (P24525    ), CYPH_CATRO  (Q39613    ), 
CYPH_ENCCU  (Q8SRE1    ), CYPH_LUPLU  (O49886    ), CYPH_MAIZE  (P21569    ), 
CYPH_NEUCR  (P10255    ), CYPH_SCHPO  (P18253    ), CYPH_SOLLC  (P21568    ), 
CYPH_UROFA  (O00060    ), CYPH_YEAST  (P14832    ), CYPR_CALVI  (P28517    ), 
CYPR_DROME  (P15425    ), CYPX_USEUD  (P35627    ), NKTR_HUMAN  (P30414    ), 
NKTR_MOUSE  (P30415    ), PAL4A_HUMAN (Q9Y536    ), PAL4C_HUMAN (A0A0B4J2A2), 
PAL4D_HUMAN (F5H284    ), PAL4E_HUMAN (A0A075B759), PAL4F_HUMAN (P0DN26    ), 
PAL4G_HUMAN (P0DN37    ), PNSL5_ARATH (Q9ASS6    ), PPI1_BRUA2  (Q2YPY5    ), 
PPI1_BRUAB  (Q57D43    ), PPI1_BRUME  (Q8YHB5    ), PPI1_BRUSU  (Q8G0J9    ), 
PPI1_STAEQ  (Q5HQK8    ), PPI1_STAES  (Q8CT84    ), PPI1_STAS1  (Q49W93    ), 
PPI1_SYNY3  (P72704    ), PPI2_SYNY3  (P73789    ), PPIA1_RHIO9 (P0C1H7    ), 
PPIA2_RHIO9 (P0C1H8    ), PPIA_ACIAD  (P42693    ), PPIA_AOTTR  (Q6DTV9    ), 
PPIA_BLAGE  (P54985    ), PPIA_BOVIN  (P62935    ), PPIA_CANAL  (P22011    ), 
PPIA_CHLAE  (P62938    ), PPIA_CRIGR  (P14851    ), PPIA_DICD3  (O53021    ), 
PPIA_DICDI  (Q54SM3    ), PPIA_DROME  (P25007    ), PPIA_ECHGR  (P14088    ), 
PPIA_ECO57  (P0AFL5    ), PPIA_ECOL6  (P0AFL4    ), PPIA_ECOLI  (P0AFL3    ), 
PPIA_FELCA  (Q8HXS3    ), PPIA_GORGO  (Q0ZQL0    ), PPIA_HELPJ  (Q9ZJH5    ), 
PPIA_HELPY  (O25982    ), PPIA_HEMPU  (P91791    ), PPIA_HUMAN  (P62937    ), 
PPIA_HYLLA  (Q0ZQK8    ), PPIA_MACMU  (P62940    ), PPIA_MOUSE  (P17742    ), 
PPIA_MYCBO  (P65763    ), PPIA_MYCLE  (Q9CDE9    ), PPIA_MYCTO  (P9WHW2    ), 
PPIA_MYCTU  (P9WHW3    ), PPIA_NEOCA  (P84343    ), PPIA_NOMLE  (Q0ZQK7    ), 
PPIA_PANPA  (Q0ZQL2    ), PPIA_PANTR  (Q0ZQL1    ), PPIA_PAPAN  (P62941    ), 
PPIA_PARPR  (O00845    ), PPIA_PIG    (P62936    ), PPIA_PONPY  (Q5R8S7    ), 
PPIA_PSEAE  (Q59641    ), PPIA_RABIT  (Q9TTC6    ), PPIA_RAT    (P10111    ), 
PPIA_SAGOE  (Q0ZQK3    ), PPIA_SALTY  (P20753    ), PPIA_SCHMA  (Q26565    ), 
PPIA_STRAQ  (Q06118    ), PPIA_SYMSY  (Q0ZQK6    ), PPIB1_RHIO9 (P0C1H9    ), 
PPIB2_RHIO9 (P0C1I0    ), PPIB_ARTBE  (O93826    ), PPIB_ASPFU  (Q4WP12    ), 
PPIB_ASPNG  (Q8X166    ), PPIB_ASPOR  (Q2UGK2    ), PPIB_BACSU  (P35137    ), 
PPIB_BOVIN  (P80311    ), PPIB_CHICK  (P24367    ), PPIB_CRYNB  (P0CP79    ), 
PPIB_CRYNJ  (P0CP78    ), PPIB_DICDI  (Q9TW32    ), PPIB_ECOLI  (P23869    ), 
PPIB_EMENI  (Q5B4R3    ), PPIB_GIBZE  (Q4I5R9    ), PPIB_HAEIN  (P44499    ), 
PPIB_HUMAN  (P23284    ), PPIB_MOUSE  (P24369    ), PPIB_NEUCR  (Q7S7Z6    ), 
PPIB_ORPSP  (Q01490    ), PPIB_RAT    (P24368    ), PPIB_SCHJA  (Q27774    ), 
PPIB_SCHMA  (Q26551    ), PPIB_SCHPO  (O94273    ), PPIB_STRAQ  (P77949    ), 
PPIB_STRAT  (P83221    ), PPIB_TREPA  (O66105    ), PPIB_YARLI  (Q6C4W6    ), 
PPIC_BOVIN  (Q08E11    ), PPIC_HUMAN  (P45877    ), PPIC_MOUSE  (P30412    ), 
PPID_AMAMU  (Q5U8Z7    ), PPID_ASHGO  (Q75A33    ), PPID_ASPFU  (Q4WIF3    ), 
PPID_ASPOR  (Q2U0E0    ), PPID_BOVIN  (P26882    ), PPID_CANAL  (Q5ACI8    ), 
PPID_CANGA  (Q6FNU6    ), PPID_DEBHA  (Q6BXZ7    ), PPID_DICDI  (Q9UA41    ), 
PPID_EMENI  (Q5B4E7    ), PPID_GIBZE  (Q4HXF6    ), PPID_HUMAN  (Q08752    ), 
PPID_KLULA  (Q6CL78    ), PPID_MOUSE  (Q9CR16    ), PPID_NEUCR  (Q9P3X9    ), 
PPID_RAT    (Q6DGG0    ), PPID_RHIO9  (P0C1I1    ), PPID_SCHPO  (Q11004    ), 
PPID_USTMA  (Q4P0V4    ), PPID_YARLI  (Q6CBP4    ), PPID_YEAST  (P53691    ), 
PPIE_BOVIN  (A4FV72    ), PPIE_DROME  (Q9V3G3    ), PPIE_HAECO  (Q4G338    ), 
PPIE_HUMAN  (Q9UNP9    ), PPIE_MOUSE  (Q9QZH3    ), PPIE_PONAB  (Q5R723    ), 
PPIE_RHIO9  (P0C1I2    ), PPIE_SCHJA  (Q26516    ), PPIE_SCHMA  (Q26548    ), 
PPIF_BOVIN  (P30404    ), PPIF_HUMAN  (P30405    ), PPIF_MOUSE  (Q99KR7    ), 
PPIF_RAT    (P29117    ), PPIG_HUMAN  (Q13427    ), PPIG_MOUSE  (A2AR02    ), 
PPIG_RAT    (O55035    ), PPIH_ASPFU  (Q4WCM6    ), PPIH_ASPOR  (Q2TZ33    ), 
PPIH_BOVIN  (Q0P5D0    ), PPIH_CRYNB  (P0CP83    ), PPIH_CRYNJ  (P0CP82    ), 
PPIH_EMENI  (Q5AQL0    ), PPIH_GIBZE  (Q4IPH4    ), PPIH_HUMAN  (O43447    ), 
PPIH_MOUSE  (Q9D868    ), PPIH_NEUCR  (Q7SG06    ), PPIH_RHIO9  (P0C1I3    ), 
PPIH_SCHPO  (O74729    ), PPIH_USTMA  (Q4P6X6    ), PPIL1_ASPFU (Q4WCR3    ), 
PPIL1_ASPNG (Q8X191    ), PPIL1_ASPOR (Q2U6U0    ), PPIL1_BOVIN (Q5E992    ), 
PPIL1_CRYNB (P0CP85    ), PPIL1_CRYNJ (P0CP84    ), PPIL1_EMENI (Q5ASQ0    ), 
PPIL1_GIBZE (Q4I1Y1    ), PPIL1_HUMAN (Q9Y3C6    ), PPIL1_MOUSE (Q9D0W5    ), 
PPIL1_NEUCR (Q7SF72    ), PPIL1_RHIO9 (P0C1I4    ), PPIL1_SCHPO (P87051    ), 
PPIL2_ARATH (Q9FJX0    ), PPIL2_ASPFU (Q4WVU5    ), PPIL2_ASPOR (Q2U5W8    ), 
PPIL2_CAEEL (P52012    ), PPIL2_CRYNB (P0CP91    ), PPIL2_CRYNJ (P0CP90    ), 
PPIL2_EMENI (Q5AXT6    ), PPIL2_GIBZE (Q4IBK5    ), PPIL2_HUMAN (Q13356    ), 
PPIL2_MOUSE (Q9D787    ), PPIL2_NEUCR (Q7RXA6    ), PPIL2_RHIO9 (P0C1J1    ), 
PPIL2_SCHPO (Q09928    ), PPIL2_USTMA (Q4P555    ), PPIL3_CHICK (Q5ZLV2    ), 
PPIL3_CRYNB (P0CP87    ), PPIL3_CRYNJ (P0CP86    ), PPIL3_DICDI (Q54E95    ), 
PPIL3_EMENI (Q5BAH7    ), PPIL3_GIBZE (Q4IPB8    ), PPIL3_HUMAN (Q9H2H8    ), 
PPIL3_MOUSE (Q9D6L8    ), PPIL3_NEUCR (Q6MWS8    ), PPIL3_RAT   (Q812D3    ), 
PPI_LOTGI   (B3A0R0    ), PPI_SYNE7   (P29820    ), RBP2_BOVIN  (P48820    ), 
RBP2_HUMAN  (P49792    ), RBP2_MOUSE  (Q9ERU9    ), RBP2_PANTR  (H2QII6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
60 sequences

BPPI_STRP6  (Q5XAQ1    ), CP21C_ARATH (Q94A16    ), CP21D_ARATH (Q9C835    ), 
CP26A_ARATH (Q9LIK6    ), CP26B_ARATH (F4HTT6    ), CPY28_ARATH (O65220    ), 
CPY71_ARATH (Q8W4D0    ), CWC27_ASHGO (Q75A74    ), CWC27_CRYNB (P0CP93    ), 
CWC27_CRYNJ (P0CP92    ), CWC27_DEBHA (Q6BWH6    ), CWC27_YARLI (Q6CGK4    ), 
CWC27_YEAST (Q02770    ), CYP22_ARATH (Q9ZVJ4    ), CYP23_ARATH (Q8LDR3    ), 
CYP37_ARATH (P82869    ), CYP38_ARATH (Q9SSA5    ), CYP59_ARATH (Q6Q151    ), 
CYP8_YEAST  (P53728    ), CYP95_ARATH (Q8RWY7    ), CYP9_CAEBR  (A8X8D0    ), 
CYPR_YEAST  (P25334    ), PPI1_STAA3  (Q2FIC1    ), PPI1_STAA8  (Q2FZU9    ), 
PPI1_STAAB  (Q2YWT2    ), PPI1_STAAC  (Q5HHD1    ), PPI1_STAAM  (Q99VD4    ), 
PPI1_STAAN  (Q7A6I1    ), PPI1_STAAR  (Q6GID4    ), PPI1_STAAS  (Q6GAX2    ), 
PPI1_STAAW  (Q7A1C0    ), PPI1_STAHJ  (Q4L4W9    ), PPI3_SYNY3  (Q55118    ), 
PPIB_MYCLE  (P46697    ), PPIB_MYCTO  (P9WHW0    ), PPIB_MYCTU  (P9WHW1    ), 
PPID_CRYNB  (P0CP81    ), PPID_CRYNJ  (P0CP80    ), PPIL3_RHIO9 (P0C1I5    ), 
PPIL3_USTMA (Q4PCH8    ), PPIL4_ASPFU (Q4WAQ9    ), PPIL4_ASPOR (Q2U256    ), 
PPIL4_CRYNB (P0CP89    ), PPIL4_CRYNJ (P0CP88    ), PPIL4_EMENI (Q5ARI5    ), 
PPIL4_GIBZE (Q4IE79    ), PPIL4_HUMAN (Q8WUA2    ), PPIL4_MOUSE (Q9CXG3    ), 
PPIL4_NEUCR (Q871A4    ), PPIL4_RHIO9 (P0C1I6    ), PPIL4_SCHPO (Q9UUE4    ), 
PPIL4_USTMA (P0C196    ), PPIL6_BOVIN (Q1RMP7    ), PPIL6_HUMAN (Q8IXY8    ), 
PPIL6_MOUSE (Q9D6D8    ), PPWD1_BOVIN (Q29RZ2    ), PPWD1_HUMAN (Q96BP3    ), 
PPWD1_MOUSE (Q8CEC6    ), PPWD1_PONAB (Q5NVL7    ), TLP40_SPIOL (O49939    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
5 sequences

CYPH_BETPN  (P81531    ), PPIA_NAEFO  (P84342    ), PPIA_PENGL  (P85444    ), 
PPIM_MAIZE  (Q10724    ), TLP20_SPIOL (P82536    )
» more

PDB
[Detailed view]
170 PDB

1A33; 1A58; 1AK4; 1AWQ; 1AWR; 1AWU; 1AWV; 1BCK; 1C5F; 1CLH; 1CWA; 1CWB; 1CWC; 1CWF; 1CWH; 1CWI; 1CWJ; 1CWK; 1CWL; 1CWM; 1CWO; 1CYN; 1DYW; 1E3B; 1E8K; 1FGL; 1H0P; 1IHG; 1IIP; 1IST; 1J2A; 1LOP; 1M63; 1M9C; 1M9D; 1M9E; 1M9F; 1M9X; 1M9Y; 1MF8; 1MIK; 1MZW; 1NMK; 1OCA; 1QOI; 1RMH; 1V9T; 1VAI; 1VBS; 1VBT; 1VDN; 1W74; 1W8L; 1W8M; 1W8V; 1XWN; 1XYH; 1YND; 1ZKC; 1ZKF; 1ZMF; 2ALF; 2BIT; 2BIU; 2CK1; 2CMT; 2CPL; 2CYH; 2ESL; 2GW2; 2HE9; 2HQ6; 2IGV; 2IGW; 2K7N; 2MC9; 2MS4; 2MZU; 2N0T; 2NUL; 2OJU; 2OK3; 2R99; 2RMA; 2RMB; 2RMC; 2RS4; 2WFJ; 2WLW; 2X25; 2X2A; 2X2C; 2X2D; 2X7K; 2XGY; 2Z6W; 3CYH; 3CYS; 3ICH; 3ICI; 3JB9; 3K0M; 3K0N; 3K0O; 3K0P; 3K0Q; 3K2C; 3ODI; 3ODL; 3QYU; 3R49; 3R4G; 3R54; 3R56; 3R57; 3R59; 3RCF; 3RCG; 3RCI; 3RCK; 3RCL; 3RD9; 3RDA; 3RDB; 3RDC; 3RDD; 4CYH; 4DGA; 4DGB; 4DGC; 4DGD; 4DGE; 4I9Y; 4IPZ; 4J58; 4J59; 4J5A; 4J5B; 4J5C; 4J5D; 4J5E; 4LQW; 4N1M; 4N1N; 4N1O; 4N1P; 4N1Q; 4N1R; 4N1S; 4O8H; 4O8I; 4R3E; 4TOT; 4XNC; 4YUG; 4YUH; 4YUI; 4YUJ; 4YUK; 4YUL; 4YUM; 4YUN; 4YUO; 4YUP; 4ZSC; 4ZSD; 5A0E; 5CYH; 5F66; 5FJB
» more

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