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| Entry: PS00170 |
General information about the entry
| Entry name [info] | CSA_PPIASE_1 |
| Accession [info] | PS00170 |
| Entry type [info] | PATTERN |
| Date [info] | 01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00154 |
Name and characterization of the entry
| Description [info] | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. |
| Pattern [info] |
[FY]-x(2)-[STCNLVA]-x-[FV]-H-[RH]-[LIVMNS]-[LIVM]-x(2)-F-[LIVM]-x-Q- [AGFT]-G. |
Numerical results [info]
| Total number of hits | 255 in 255 different sequences |
| Number of true positive hits | 255 in 255 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 61 |
| Number of 'partial' sequences | 5 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.70 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
255 sequences
CP18A_ARATH (Q9LPC7 ), CP18B_ARATH (Q9SIH1 ), CP18C_ARATH (P34790 ), CP18D_ARATH (Q42406 ), CP19A_ARATH (Q38900 ), CP19B_ARATH (Q9SKQ0 ), CP19C_ARATH (Q38867 ), CP19D_ARATH (Q8LDP4 ), CP20A_ARATH (Q9SP02 ), CP20C_ARATH (P34791 ), CP21A_ARATH (O49605 ), CP21B_ARATH (Q8L8W5 ), CPY57_ARATH (Q6Q152 ), CWC27_ASPFU (Q4WE62 ), CWC27_BOVIN (Q17QX9 ), CWC27_DANRE (Q7ZW86 ), CWC27_EMENI (Q5AUG9 ), CWC27_GIBZE (Q4IPB3 ), CWC27_HUMAN (Q6UX04 ), CWC27_MACFA (Q4R713 ), CWC27_MOUSE (Q3TKY6 ), CWC27_NEUCR (Q7SBX8 ), CWC27_PONAB (Q5R7W3 ), CWC27_RAT (Q5XIB2 ), CWC27_RHIO9 (P0C1J2 ), CWC27_USTMA (Q4P7H2 ), CWC27_XENLA (Q6GLX7 ), CYP10_CAEEL (P52017 ), CYP11_CAEEL (P52018 ), CYP11_RHIO9 (P0C1I9 ), CYP15_RHIO9 (P0C1J0 ), CYP1_BRUMA (Q27450 ), CYP1_CAEEL (P52009 ), CYP1_SOYBN (Q8W171 ), CYP2_CAEEL (P52010 ), CYP3_CAEEL (P52011 ), CYP40_ARATH (Q9C566 ), CYP5_CAEEL (P52013 ), CYP5_RHIO9 (P0C1I7 ), CYP63_ARATH (Q9LY75 ), CYP6_CAEEL (P52014 ), CYP6_RHIO9 (P0C1I8 ), CYP7_CAEEL (P52015 ), CYP7_SCHPO (O42941 ), CYP7_YEAST (P47103 ), CYP8_CAEEL (P52016 ), CYP9_CAEEL (Q09637 ), CYP9_SCHPO (O74942 ), CYPB_ARTBC (D4AY02 ), CYPB_VICFA (Q41651 ), CYPB_YEAST (P23285 ), CYPC_YEAST (P25719 ), CYPD_YEAST (P35176 ), CYPE_DICDI (Q9NI62 ), CYPH_ALLCE (P34887 ), CYPH_BRANA (P24525 ), CYPH_CATRO (Q39613 ), CYPH_ENCCU (Q8SRE1 ), CYPH_LUPLU (O49886 ), CYPH_MAIZE (P21569 ), CYPH_NEUCR (P10255 ), CYPH_SCHPO (P18253 ), CYPH_SOLLC (P21568 ), CYPH_UROFA (O00060 ), CYPH_YEAST (P14832 ), CYPR_CALVI (P28517 ), CYPR_DROME (P15425 ), CYPX_USEUD (P35627 ), NKTR_HUMAN (P30414 ), NKTR_MOUSE (P30415 ), PAL4A_HUMAN (Q9Y536 ), PAL4C_HUMAN (A0A0B4J2A2), PAL4D_HUMAN (F5H284 ), PAL4E_HUMAN (A0A075B759), PAL4F_HUMAN (P0DN26 ), PAL4G_HUMAN (P0DN37 ), PNSL5_ARATH (Q9ASS6 ), PPI1_BRUA2 (Q2YPY5 ), PPI1_BRUAB (Q57D43 ), PPI1_BRUME (Q8YHB5 ), PPI1_BRUSU (Q8G0J9 ), PPI1_STAEQ (Q5HQK8 ), PPI1_STAES (Q8CT84 ), PPI1_STAS1 (Q49W93 ), PPI1_SYNY3 (P72704 ), PPI2_SYNY3 (P73789 ), PPIA1_RHIO9 (P0C1H7 ), PPIA2_RHIO9 (P0C1H8 ), PPIA_ACIAD (P42693 ), PPIA_AOTTR (Q6DTV9 ), PPIA_BLAGE (P54985 ), PPIA_BOVIN (P62935 ), PPIA_CANAL (P22011 ), PPIA_CHLAE (P62938 ), PPIA_CRIGR (P14851 ), PPIA_DICD3 (O53021 ), PPIA_DICDI (Q54SM3 ), PPIA_DROME (P25007 ), PPIA_ECHGR (P14088 ), PPIA_ECO57 (P0AFL5 ), PPIA_ECOL6 (P0AFL4 ), PPIA_ECOLI (P0AFL3 ), PPIA_FELCA (Q8HXS3 ), PPIA_GORGO (Q0ZQL0 ), PPIA_HELPJ (Q9ZJH5 ), PPIA_HELPY (O25982 ), PPIA_HEMPU (P91791 ), PPIA_HUMAN (P62937 ), PPIA_HYLLA (Q0ZQK8 ), PPIA_MACMU (P62940 ), PPIA_MOUSE (P17742 ), PPIA_MYCBO (P65763 ), PPIA_MYCLE (Q9CDE9 ), PPIA_MYCTO (P9WHW2 ), PPIA_MYCTU (P9WHW3 ), PPIA_NEOCA (P84343 ), PPIA_NOMLE (Q0ZQK7 ), PPIA_PANPA (Q0ZQL2 ), PPIA_PANTR (Q0ZQL1 ), PPIA_PAPAN (P62941 ), PPIA_PARPR (O00845 ), PPIA_PIG (P62936 ), PPIA_PONPY (Q5R8S7 ), PPIA_PSEAE (Q59641 ), PPIA_RABIT (Q9TTC6 ), PPIA_RAT (P10111 ), PPIA_SAGOE (Q0ZQK3 ), PPIA_SALTY (P20753 ), PPIA_SCHMA (Q26565 ), PPIA_STRAQ (Q06118 ), PPIA_SYMSY (Q0ZQK6 ), PPIB1_RHIO9 (P0C1H9 ), PPIB2_RHIO9 (P0C1I0 ), PPIB_ARTBE (O93826 ), PPIB_ASPFU (Q4WP12 ), PPIB_ASPNG (Q8X166 ), PPIB_ASPOR (Q2UGK2 ), PPIB_BACSU (P35137 ), PPIB_BOVIN (P80311 ), PPIB_CHICK (P24367 ), PPIB_CRYNB (P0CP79 ), PPIB_CRYNJ (P0CP78 ), PPIB_DICDI (Q9TW32 ), PPIB_ECOLI (P23869 ), PPIB_EMENI (Q5B4R3 ), PPIB_GIBZE (Q4I5R9 ), PPIB_HAEIN (P44499 ), PPIB_HUMAN (P23284 ), PPIB_MOUSE (P24369 ), PPIB_NEUCR (Q7S7Z6 ), PPIB_ORPSP (Q01490 ), PPIB_RAT (P24368 ), PPIB_SCHJA (Q27774 ), PPIB_SCHMA (Q26551 ), PPIB_SCHPO (O94273 ), PPIB_STRAQ (P77949 ), PPIB_STRAT (P83221 ), PPIB_TREPA (O66105 ), PPIB_YARLI (Q6C4W6 ), PPIC_BOVIN (Q08E11 ), PPIC_HUMAN (P45877 ), PPIC_MOUSE (P30412 ), PPID_AMAMU (Q5U8Z7 ), PPID_ASHGO (Q75A33 ), PPID_ASPFU (Q4WIF3 ), PPID_ASPOR (Q2U0E0 ), PPID_BOVIN (P26882 ), PPID_CANAL (Q5ACI8 ), PPID_CANGA (Q6FNU6 ), PPID_DEBHA (Q6BXZ7 ), PPID_DICDI (Q9UA41 ), PPID_EMENI (Q5B4E7 ), PPID_GIBZE (Q4HXF6 ), PPID_HUMAN (Q08752 ), PPID_KLULA (Q6CL78 ), PPID_MOUSE (Q9CR16 ), PPID_NEUCR (Q9P3X9 ), PPID_RAT (Q6DGG0 ), PPID_RHIO9 (P0C1I1 ), PPID_SCHPO (Q11004 ), PPID_USTMA (Q4P0V4 ), PPID_YARLI (Q6CBP4 ), PPID_YEAST (P53691 ), PPIE_BOVIN (A4FV72 ), PPIE_DROME (Q9V3G3 ), PPIE_HAECO (Q4G338 ), PPIE_HUMAN (Q9UNP9 ), PPIE_MOUSE (Q9QZH3 ), PPIE_PONAB (Q5R723 ), PPIE_RHIO9 (P0C1I2 ), PPIE_SCHJA (Q26516 ), PPIE_SCHMA (Q26548 ), PPIF_BOVIN (P30404 ), PPIF_HUMAN (P30405 ), PPIF_MOUSE (Q99KR7 ), PPIF_RAT (P29117 ), PPIG_HUMAN (Q13427 ), PPIG_MOUSE (A2AR02 ), PPIG_RAT (O55035 ), PPIH_ASPFU (Q4WCM6 ), PPIH_ASPOR (Q2TZ33 ), PPIH_BOVIN (Q0P5D0 ), PPIH_CRYNB (P0CP83 ), PPIH_CRYNJ (P0CP82 ), PPIH_EMENI (Q5AQL0 ), PPIH_GIBZE (Q4IPH4 ), PPIH_HUMAN (O43447 ), PPIH_MOUSE (Q9D868 ), PPIH_NEUCR (Q7SG06 ), PPIH_RHIO9 (P0C1I3 ), PPIH_SCHPO (O74729 ), PPIH_USTMA (Q4P6X6 ), PPIL1_ASPFU (Q4WCR3 ), PPIL1_ASPNG (Q8X191 ), PPIL1_ASPOR (Q2U6U0 ), PPIL1_BOVIN (Q5E992 ), PPIL1_CRYNB (P0CP85 ), PPIL1_CRYNJ (P0CP84 ), PPIL1_EMENI (Q5ASQ0 ), PPIL1_GIBZE (Q4I1Y1 ), PPIL1_HUMAN (Q9Y3C6 ), PPIL1_MOUSE (Q9D0W5 ), PPIL1_NEUCR (Q7SF72 ), PPIL1_RHIO9 (P0C1I4 ), PPIL1_SCHPO (P87051 ), PPIL2_ARATH (Q9FJX0 ), PPIL2_ASPFU (Q4WVU5 ), PPIL2_ASPOR (Q2U5W8 ), PPIL2_CAEEL (P52012 ), PPIL2_CRYNB (P0CP91 ), PPIL2_CRYNJ (P0CP90 ), PPIL2_EMENI (Q5AXT6 ), PPIL2_GIBZE (Q4IBK5 ), PPIL2_HUMAN (Q13356 ), PPIL2_MOUSE (Q9D787 ), PPIL2_NEUCR (Q7RXA6 ), PPIL2_RHIO9 (P0C1J1 ), PPIL2_SCHPO (Q09928 ), PPIL2_USTMA (Q4P555 ), PPIL3_CHICK (Q5ZLV2 ), PPIL3_CRYNB (P0CP87 ), PPIL3_CRYNJ (P0CP86 ), PPIL3_DICDI (Q54E95 ), PPIL3_EMENI (Q5BAH7 ), PPIL3_GIBZE (Q4IPB8 ), PPIL3_HUMAN (Q9H2H8 ), PPIL3_MOUSE (Q9D6L8 ), PPIL3_NEUCR (Q6MWS8 ), PPIL3_RAT (Q812D3 ), PPI_LOTGI (B3A0R0 ), PPI_SYNE7 (P29820 ), RBP2_BOVIN (P48820 ), RBP2_HUMAN (P49792 ), RBP2_MOUSE (Q9ERU9 ), RBP2_PANTR (H2QII6 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
61 sequences
BPPI_STRP6 (Q5XAQ1 ), CP21C_ARATH (Q94A16 ), CP21D_ARATH (Q9C835 ), CP26A_ARATH (Q9LIK6 ), CP26B_ARATH (F4HTT6 ), CPY28_ARATH (O65220 ), CPY71_ARATH (Q8W4D0 ), CWC27_ASHGO (Q75A74 ), CWC27_CRYNB (P0CP93 ), CWC27_CRYNJ (P0CP92 ), CWC27_DEBHA (Q6BWH6 ), CWC27_YARLI (Q6CGK4 ), CWC27_YEAST (Q02770 ), CYP22_ARATH (Q9ZVJ4 ), CYP23_ARATH (Q8LDR3 ), CYP37_ARATH (P82869 ), CYP38_ARATH (Q9SSA5 ), CYP59_ARATH (Q6Q151 ), CYP8_YEAST (P53728 ), CYP95_ARATH (Q8RWY7 ), CYP9_CAEBR (A8X8D0 ), CYPR_YEAST (P25334 ), PPI1_STAA3 (Q2FIC1 ), PPI1_STAA8 (Q2FZU9 ), PPI1_STAAB (Q2YWT2 ), PPI1_STAAC (Q5HHD1 ), PPI1_STAAM (Q99VD4 ), PPI1_STAAN (Q7A6I1 ), PPI1_STAAR (Q6GID4 ), PPI1_STAAS (Q6GAX2 ), PPI1_STAAW (Q7A1C0 ), PPI1_STAHJ (Q4L4W9 ), PPI3_SYNY3 (Q55118 ), PPIB_MYCLE (P46697 ), PPIB_MYCTO (P9WHW0 ), PPIB_MYCTU (P9WHW1 ), PPID_CRYNB (P0CP81 ), PPID_CRYNJ (P0CP80 ), PPIL3_RHIO9 (P0C1I5 ), PPIL3_USTMA (Q4PCH8 ), PPIL4_ASPFU (Q4WAQ9 ), PPIL4_ASPOR (Q2U256 ), PPIL4_CRYNB (P0CP89 ), PPIL4_CRYNJ (P0CP88 ), PPIL4_EMENI (Q5ARI5 ), PPIL4_GIBZE (Q4IE79 ), PPIL4_HUMAN (Q8WUA2 ), PPIL4_MOUSE (Q9CXG3 ), PPIL4_NEUCR (Q871A4 ), PPIL4_RHIO9 (P0C1I6 ), PPIL4_SCHPO (Q9UUE4 ), PPIL4_USTMA (P0C196 ), PPIL6_BOVIN (Q1RMP7 ), PPIL6_HUMAN (Q8IXY8 ), PPIL6_MOUSE (Q9D6D8 ), PPWD1_BOVIN (Q29RZ2 ), PPWD1_HUMAN (Q96BP3 ), PPWD1_MOUSE (Q8CEC6 ), PPWD1_PONAB (Q5NVL7 ), SIG7_CAEEL (G5EEW6 ), TLP40_SPIOL (O49939 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
5 sequences
CYPH_BETPN (P81531 ), PPIA_NAEFO (P84342 ), PPIA_PENGL (P85444 ), PPIM_MAIZE (Q10724 ), TLP20_SPIOL (P82536 )» more |
| PDB [Detailed view] |
196 PDB
1A33; 1A58; 1AK4; 1AWQ; 1AWR; 1AWU; 1AWV; 1BCK; 1C5F; 1CLH; 1CWA; 1CWB; 1CWC; 1CWF; 1CWH; 1CWI; 1CWJ; 1CWK; 1CWL; 1CWM; 1CWO; 1CYN; 1DYW; 1E3B; 1E8K; 1FGL; 1H0P; 1IHG; 1IIP; 1IST; 1J2A; 1LOP; 1M63; 1M9C; 1M9D; 1M9E; 1M9F; 1M9X; 1M9Y; 1MF8; 1MIK; 1MZW; 1NMK; 1OCA; 1QOI; 1RMH; 1V9T; 1VAI; 1VBS; 1VBT; 1VDN; 1W74; 1W8L; 1W8M; 1W8V; 1XWN; 1XYH; 1YND; 1ZKC; 1ZKF; 1ZMF; 2ALF; 2BIT; 2BIU; 2CK1; 2CMT; 2CPL; 2CYH; 2ESL; 2GW2; 2HE9; 2HQ6; 2IGV; 2IGW; 2K7N; 2MC9; 2MS4; 2MZU; 2N0T; 2NUL; 2OJU; 2OK3; 2R99; 2RMA; 2RMB; 2RMC; 2RS4; 2WFJ; 2WLW; 2X25; 2X2A; 2X2C; 2X2D; 2X7K; 2XGY; 2Z6W; 3CYH; 3CYS; 3ICH; 3ICI; 3JB9; 3K0M; 3K0N; 3K0O; 3K0P; 3K0Q; 3K2C; 3ODI; 3ODL; 3QYU; 3R49; 3R4G; 3R54; 3R56; 3R57; 3R59; 3RCF; 3RCG; 3RCI; 3RCK; 3RCL; 3RD9; 3RDA; 3RDB; 3RDC; 3RDD; 4CYH; 4DGA; 4DGB; 4DGC; 4DGD; 4DGE; 4I9Y; 4IPZ; 4J58; 4J59; 4J5A; 4J5B; 4J5C; 4J5D; 4J5E; 4LQW; 4N1M; 4N1N; 4N1O; 4N1P; 4N1Q; 4N1R; 4N1S; 4O8H; 4O8I; 4R3E; 4TOT; 4XNC; 4YUG; 4YUH; 4YUI; 4YUJ; 4YUK; 4YUL; 4YUM; 4YUN; 4YUO; 4YUP; 4ZSC; 4ZSD; 5A0E; 5CBT; 5CBU; 5CBV; 5CBW; 5CCN; 5CCQ; 5CCR; 5CCS; 5CYH; 5F66; 5FJB; 5KUL; 5KUN; 5KUO; 5KUQ; 5KUR; 5KUS; 5KUU; 5KUV; 5KUW; 5KUZ; 5KV0; 5KV1; 5KV2; 5KV3; 5KV4; 5KV5; 5KV6; 5KV7 » more |
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