 |
|
| Entry: PS00177 |
| General information about the entry | |
|---|---|
| Entry name | TOPOISOMERASE_II |
| Accession number | PS00177 |
| Entry type | PATTERN |
| Date | APR-1990 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00160 |
| Name and characterization of the entry | |
| Description | DNA topoisomerase II signature. |
| Pattern | [LIVMA]-{R}-E-G-[DN]-S-A-{F}-[STAG]. |
| Numerical results | |
|
|
| Comments | |
|
|
| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:GYRB1_ACILW (Q44088), GYRB2_ACILW (Q44272), GYRBM_ARATH (Q94BZ7), GYRBP_ARATH (Q9SS38), GYRBR_STRSH (P50074), GYRBS_STRSH (P50075), GYRB_ACIBA (Q43907), GYRB_ACICA (Q43947), GYRB_ACIG3 (Q44270), GYRB_ACIG6 (Q44271), GYRB_ACIGA (Q44273), GYRB_ACIGB (Q44274), GYRB_ACIHA (Q44065), GYRB_ACIJO (Q44081), GYRB_ACIJU (Q44080), GYRB_ACIS6 (Q44277), GYRB_ACIS8 (Q44275), GYRB_ACIS9 (Q44276), GYRB_AQUAE (O67137), GYRB_BACAN (Q9X3Y6), GYRB_BACCE (Q9X3Y3), GYRB_BACHD (O50627), GYRB_BACMY (Q9X3Y5), GYRB_BACSU (P05652), GYRB_BORBU (P33769), GYRB_BORHE (Q9ZFK1), GYRB_BUCAI (P57126), GYRB_BUCAP (P29435), GYRB_BUCBP (Q89B37), GYRB_CAMJE (O87667), GYRB_CAUCN (B8GXQ0), GYRB_CAUCR (P0CAX1), GYRB_CHIJA (Q9FAX2), GYRB_CHLMU (Q9PKK3), GYRB_CHLPN (Q9Z8R3), GYRB_CHLTR (O84193), GYRB_CLOAB (P94604), GYRB_CYTAU (Q9LCK0), GYRB_CYTHU (Q9LCK1), GYRB_ECO57 (P0AES7), GYRB_ECOLI (P0AES6), GYRB_FLEEL (Q9FAX1), GYRB_HAEIN (P43701), GYRB_HALL2 (P21558), GYRB_HALVD (D4GZ01), GYRB_HELPJ (Q9ZLX3), GYRB_HELPY (P55992), GYRB_MYCAT (Q9ZAQ6), GYRB_MYCCT (P50028), GYRB_MYCGA (P47720), GYRB_MYCGE (P47249), GYRB_MYCHP (P43053), GYRB_MYCLE (Q59533), GYRB_MYCPA (Q9L7L3), GYRB_MYCPN (P22447), GYRB_MYCS2 (A0QNE0), GYRB_MYCSM (P0C559), GYRB_MYCTA (A5TY73), GYRB_MYCTU (P0C5C5), GYRB_MYXXA (O33367), GYRB_NEIGO (P22118), GYRB_NICBE (Q5YLB4), GYRB_ORYSJ (Q5NBJ3), GYRB_PSEAE (Q9I7C2), GYRB_PSEPU (P13364), GYRB_RICBR (Q1RHT8), GYRB_RICCN (Q92H87), GYRB_RICFE (Q4UKX5), GYRB_RICPR (Q9ZCX2), GYRB_RICTY (Q68WF6), GYRB_SALTI (P0A2I4), GYRB_SALTY (P0A2I3), GYRB_SHIFL (P0AES8), GYRB_SPICI (P34031), GYRB_STAA3 (Q2FKQ1), GYRB_STAAC (Q5HJZ1), GYRB_STAAM (P66936), GYRB_STAAN (P66937), GYRB_STAAR (Q6GKU0), GYRB_STAAS (Q6GD85), GYRB_STAAU (P0A0K8), GYRB_STAAW (P0A0K7), GYRB_STAEQ (Q5HK03), GYRB_STAES (Q8CQK4), GYRB_STRCO (P35886), GYRB_STRP1 (Q9A0L0), GYRB_STRP3 (P0DG04), GYRB_STRP6 (Q5XD05), GYRB_STRP8 (Q8P1M4), GYRB_STRPN (P0A4L9), GYRB_STRPQ (P0DG05), GYRB_STRR6 (P0A4M0), GYRB_SYNY3 (P77966), GYRB_THEMA (P77993), GYRB_TREDE (O87545), GYRB_TREPA (O08399), GYRB_VIBCH (Q9KVX3), GYRB_VIBPA (O51859), PARE_BACSU (Q59192), PARE_BARBK (P94281), PARE_BORBU (Q59189), PARE_CAUCR (O54479), PARE_ECOLI (P20083), PARE_HAEIN (P43703), PARE_MYCGA (Q59526), PARE_MYCGE (P47445), PARE_MYCPN (P78016), PARE_PSEAE (Q9HUJ8), PARE_RICBR (Q1RK03), PARE_RICCN (Q92IW1), PARE_RICFE (Q4UKT4), PARE_RICPR (Q9ZDU7), PARE_RICTY (Q68XE1), PARE_SALTI (P0A2I6), PARE_SALTY (P0A2I5), PARE_STAA8 (Q2FYS5), PARE_STAAC (Q5HG65), PARE_STAAM (P66938), PARE_STAAN (P66939), PARE_STAAR (Q6GH51), PARE_STAAS (Q6G9K5), PARE_STAAU (P0C1S7), PARE_STAAW (P0A0K9), PARE_STAEQ (Q5HPI6), PARE_STAES (Q8CSN9), PARE_STRPN (Q59961), TOP2A_CHICK (O42130), TOP2A_CRIGR (P41515), TOP2A_HUMAN (P11388), TOP2A_MOUSE (Q01320), TOP2A_PIG (O46374), TOP2A_RAT (P41516), TOP2B_CHICK (O42131), TOP2B_CRILO (Q64399), TOP2B_HUMAN (Q02880), TOP2B_MOUSE (Q64511), TOP2M_CAEEL (P34534), TOP2M_DICDI (P90520), TOP2_ARATH (P30182), TOP2_ASFB7 (Q00942), TOP2_ASFK5 (P0C9C2), TOP2_ASFM2 (P34203), TOP2_ASFP4 (P0C9C0), TOP2_ASFWA (P0C9C1), TOP2_BOMMO (O16140), TOP2_CAEEL (Q23670), TOP2_CANGA (O93794), TOP2_CRIFA (P27570), TOP2_DICDI (Q55BP5), TOP2_DROME (P15348), TOP2_LEICH (O61078), TOP2_MIMIV (Q5UQE6), TOP2_PEA (O24308), TOP2_PENCH (Q9Y8G8), TOP2_PLAFK (P41001), TOP2_SCHPO (P08096), TOP2_TRYBB (P12531), TOP2_TRYCR (P30190), TOP2_YEAST (P06786), TOPL_BPT4 (P09176), Y457_MYCS2 (A0QPN2)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): GYRB_ARCFU (O29720), TOP2_CANAX (P87078), TOP2_PICGU (Q01879)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): GYRB_ACIS7 (Q44278), GYRB_PROMI (P22840), GYRB_RHOCA (P31860)False positive hits (sequences which do not belong to the set under consideration): ASTD_BURXL (Q141D3), CIPK6_ORYSJ (Q6Z9F4), DDL_CUPNH (Q0K6M6), DOM_DROME (Q9NDJ2), FCJ1_DEBHA (Q6BXM9), NACA_DANRE (Q8JIU7), RPOA_METCA (Q605D7), SECA_HALHL (A1WYM9), SEPT9_MOUSE (Q80UG5), SEPT9_RAT (Q9QZR6), XTH9_ARATH (Q8LDW9), Y1130_XYLFA (Q9PE98), Y419_XYLFT (Q87E99)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] |
1BGW; 1BJT; 1LWZ; 2RGR; 2XCO; 2XCQ; 2XCR; 2XCS; 2XCT; 3FOE; 3FOF; 3K9F; 3KSA; 3KSB; 3L4J; 3L4K; 3LTN; 3NUH; 3QX3; 3RAD; 3RAE; 3RAF; 4FM9; 4GFH; |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)