Entry: PS00180

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General information about the entry

Entry name [info] GLNA_1
Accession [info] PS00180
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1995 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00162

Name and characterization of the entry

Description [info] Glutamine synthetase signature 1.
Pattern [info]
[FYWL]-D-G-S-S-x(6,8)-[DENQSTAK]-[SA]-[DE]-x(2)-[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 162 in 162 different sequences
Number of true positive hits 151 in 151 different sequences
Number of 'unknown' hits
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 22
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 93.21 %
Recall (true positives / (true positives + false negatives)) 87.28 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
151 sequences

3HAPM_CUPPJ (Q46ZL2), GLN11_ARATH (Q56WN1), GLN11_ORYSJ (P14656), 
GLN12_ARATH (Q8LCE1), GLN12_ORYSJ (P14654), GLN13_ARATH (Q9LVI8), 
GLN13_ORYSJ (Q4W8D0), GLN14_ARATH (Q9FMD9), GLN15_ARATH (Q8GXW5), 
GLNA1_ALNGL (O04867), GLNA1_BRADU (P05457), GLNA1_CHLRE (Q42688), 
GLNA1_DAUCA (O22504), GLNA1_DROME (P20477), GLNA1_FRAAL (P46033), 
GLNA1_LOTJA (Q42899), GLNA1_MAIZE (P38559), GLNA1_MEDSA (P04078), 
GLNA1_MYCBO (P0A591), GLNA1_MYCS2 (A0R079), GLNA1_MYCTO (P9WN38), 
GLNA1_MYCTU (P9WN39), GLNA1_PEA   (P08282), GLNA1_PHAVU (P04770), 
GLNA1_RHIME (Q59747), GLNA1_SOYBN (P24099), GLNA1_STRFL (P77958), 
GLNA1_STRVR (Q05542), GLNA1_VITVI (P51118), GLNA2_ARATH (Q43127), 
GLNA2_BRADU (P04772), GLNA2_CHLRE (Q42689), GLNA2_DAUCA (O22506), 
GLNA2_DROME (P20478), GLNA2_FRAAL (P20805), GLNA2_HORVU (P13564), 
GLNA2_MAIZE (P38560), GLNA2_MEDSA (Q9XQ94), GLNA2_ORYSJ (P14655), 
GLNA2_PEA   (P08281), GLNA2_PHAVU (P04771), GLNA2_RHILP (Q02154), 
GLNA2_RHIML (P45626), GLNA2_SOYBN (O82560), GLNA2_STRHY (P22878), 
GLNA2_STRVR (P19432), GLNA2_VITVI (P51119), GLNA3_HORVU (Q06378), 
GLNA3_LUPAN (P14636), GLNA3_MAIZE (P38561), GLNA3_MEDSA (Q43785), 
GLNA3_PEA   (P07694), GLNA3_PHAVU (P00965), GLNA4_MAIZE (P38562), 
GLNA4_PEA   (Q43066), GLNA4_PHAVU (P15102), GLNA5_MAIZE (P38563), 
GLNAC_BRANA (Q42624), GLNAC_MAIZE (P25462), GLNA_ACIFR  (P07804), 
GLNA_ACOCA  (Q9QY94), GLNA_AGABI  (O00088), GLNA_AMAMU  (Q8X169), 
GLNA_ASHGO  (Q75BT9), GLNA_AZOBR  (P10583), GLNA_AZOC5  (P94126), 
GLNA_AZOVI  (P22248), GLNA_BACCE  (P19064), GLNA_BACSU  (P12425), 
GLNA_BOVIN  (P15103), GLNA_CAEEL  (P34497), GLNA_CANFA  (Q8HZM5), 
GLNA_CANGA  (Q6FMT6), GLNA_CHICK  (P16580), GLNA_CLOSA  (P10656), 
GLNA_COLGL  (Q12613), GLNA_CRIGR  (P04773), GLNA_CRYNB  (P0CN85), 
GLNA_CRYNJ  (P0CN84), GLNA_DEBHA  (Q6B4U7), GLNA_ECO57  (P0A9C7), 
GLNA_ECOL6  (P0A9C6), GLNA_ECOLI  (P0A9C5), GLNA_EMENI  (Q96V52), 
GLNA_FUSSH  (Q9UUN6), GLNA_GIBFU  (Q9C2U9), GLNA_HAEIN  (P43794), 
GLNA_HALSA  (Q9HNI2), GLNA_HALVD  (P43386), GLNA_HEBCY  (Q96UV5), 
GLNA_HUMAN  (P15104), GLNA_KLULA  (Q874T6), GLNA_LACDE  (P45627), 
GLNA_LACLA  (Q9CDL9), GLNA_LACSA  (P23712), GLNA_LUPLU  (P52782), 
GLNA_MACFA  (Q4R7U3), GLNA_METCA  (P15124), GLNA_METJA  (Q60182), 
GLNA_METMP  (O59648), GLNA_METTH  (O27612), GLNA_METVO  (P21154), 
GLNA_MICDP  (P33035), GLNA_MIMIV  (Q5UR44), GLNA_MOUSE  (P15105), 
GLNA_NEIGO  (P25821), GLNA_NEUCR  (Q86ZF9), GLNA_NICPL  (P12424), 
GLNA_NOSS1  (P00964), GLNA_PANAR  (Q04831), GLNA_PASMU  (Q9CLP2), 
GLNA_PIG    (P46410), GLNA_PINSY  (P52783), GLNA_PROHU  (P28786), 
GLNA_PSEAE  (Q9HU65), GLNA_PYRAB  (Q9UY99), GLNA_PYRFU  (Q05907), 
GLNA_PYRHO  (O58097), GLNA_PYRWO  (P36687), GLNA_RAT    (P09606), 
GLNA_RHOCA  (P13499), GLNA_RHOSH  (P43518), GLNA_SALTI  (P0A1P7), 
GLNA_SALTY  (P0A1P6), GLNA_SCHPO  (Q09179), GLNA_SHIFL  (P0A9C8), 
GLNA_SQUAC  (P41320), GLNA_STAAC  (Q5HGC3), GLNA_STAAM  (P60890), 
GLNA_STAAN  (P99095), GLNA_STAAR  (Q6GHC6), GLNA_STAAS  (Q6G9Q4), 
GLNA_STAAU  (P0A040), GLNA_STAAW  (P0A039), GLNA_STAEQ  (Q5HPN2), 
GLNA_STAES  (Q8CSR8), GLNA_STRCO  (P15106), GLNA_SUIBO  (Q8J1R3), 
GLNA_SULAC  (Q9HH09), GLNA_SULSO  (P23794), GLNA_SYNP2  (P28605), 
GLNA_SYNY3  (P77961), GLNA_THEKO  (O08467), GLNA_THEMA  (P36205), 
GLNA_TUBBO  (Q86ZU6), GLNA_VIBAL  (P19904), GLNA_VIBCH  (Q9KNJ2), 
GLNA_VIGAC  (P32289), GLNA_XENLA  (P51121), GLNA_YARLI  (Q6C3E0), 
GLNA_YEAST  (P32288)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

GLNA1_DICDI (Q86B00), GLNA1_RHILV (P09826), GLNA2_DICDI (P0C7B6), 
GLNA2_MYCBO (P64246), GLNA2_MYCS2 (A0R083), GLNA2_MYCTO (P9WN36), 
GLNA2_MYCTU (P9WN37), GLNA3_DICDI (Q54WR9), GLNA3_RHILP (P31592), 
GLNA3_RHIME (O87393), GLNA_AQUAE  (O66514), GLNA_ARCFU  (O29313), 
GLNA_BACFR  (P15623), GLNA_BUTFI  (Q05650), GLNA_HELPJ  (Q9ZLW5), 
GLNA_HELPY  (P94845), LGSN_CANFA  (Q1ZZS1), LGSN_HUMAN  (Q5TDP6), 
LGSN_MOUSE  (Q8CIX8), LGSN_RABIT  (Q0GA40), LGSN_RAT    (Q7TT51), 
PUUA_ECOLI  (P78061)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
6 sequences

GLNA2_EMIHU (P81643), GLNA2_PINPS (P81107), GLNA_DUNSA  (P11600), 
GLNA_PHOLP  (P20479), GLNA_TRITH  (P51120), GLNA_VITSX  (P85087)
» More

UniProtKB/Swiss-Prot
False positive sequences
11 sequences

BGBP2_MANSE (Q8ISB6), COR2A_BOVIN (Q32LP9), COR2A_HUMAN (Q92828), 
COR2A_MOUSE (Q8C0P5), EAE_ECO11   (O31000), EAE_ECO27   (P19809), 
EAE_ECO57   (P43261), SPZ2A_WHEAT (Q9ST57), SPZ2B_WHEAT (P93692), 
TRM82_ASPFC (B0XNT4), TRM82_ASPFU (Q4WJR4)
» More

PDB
[Detailed view]
24 PDB

1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 2BVC; 2D3A; 2D3B; 2D3C; 2GLS; 2OJW; 2QC8; 2UU7; 2WHI; 3FKY; 3NG0; 3ZXR; 3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO
» More

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