Entry: PS00180

General information about the entry

Entry name [info] GLNA_1
Accession [info] PS00180
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1995 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00162

Name and characterization of the entry

Description [info] Glutamine synthetase signature 1.
Pattern [info]
[FYWL]-D-G-S-S-x(6,8)-[DENQSTAK]-[SA]-[DE]-x(2)-[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 163 in 163 different sequences
Number of true positive hits 152 in 152 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 24
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 93.25 %
Recall (true positives / (true positives + false negatives)) 86.36 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
152 sequences

3HAPM_CUPPJ (Q46ZL2), GLN11_ARATH (Q56WN1), GLN11_ORYSJ (P14656), 
GLN12_ARATH (Q8LCE1), GLN12_ORYSJ (P14654), GLN13_ARATH (Q9LVI8), 
GLN13_ORYSJ (Q4W8D0), GLN14_ARATH (Q9FMD9), GLN15_ARATH (Q8GXW5), 
GLNA1_ALNGL (O04867), GLNA1_BRADU (P05457), GLNA1_CHLRE (Q42688), 
GLNA1_DAUCA (O22504), GLNA1_DROME (P20477), GLNA1_FRAAL (P46033), 
GLNA1_LOTJA (Q42899), GLNA1_MAIZE (P38559), GLNA1_MEDSA (P04078), 
GLNA1_MYCBO (P0A591), GLNA1_MYCS2 (A0R079), GLNA1_MYCTO (P9WN38), 
GLNA1_MYCTU (P9WN39), GLNA1_PEA   (P08282), GLNA1_PHAVU (P04770), 
GLNA1_RHIME (Q59747), GLNA1_SOYBN (P24099), GLNA1_STRFL (P77958), 
GLNA1_STRVR (Q05542), GLNA1_VITVI (P51118), GLNA2_ARATH (Q43127), 
GLNA2_BRADU (P04772), GLNA2_CHLRE (Q42689), GLNA2_DAUCA (O22506), 
GLNA2_DROME (P20478), GLNA2_FRAAL (P20805), GLNA2_HORVU (P13564), 
GLNA2_MAIZE (P38560), GLNA2_MEDSA (Q9XQ94), GLNA2_ORYSJ (P14655), 
GLNA2_PEA   (P08281), GLNA2_PHAVU (P04771), GLNA2_RHILP (Q02154), 
GLNA2_RHIML (P45626), GLNA2_SOYBN (O82560), GLNA2_STRHY (P22878), 
GLNA2_STRVR (P19432), GLNA2_VITVI (P51119), GLNA3_HORVU (Q06378), 
GLNA3_LUPAN (P14636), GLNA3_MAIZE (P38561), GLNA3_MEDSA (Q43785), 
GLNA3_PEA   (P07694), GLNA3_PHAVU (P00965), GLNA4_MAIZE (P38562), 
GLNA4_PEA   (Q43066), GLNA4_PHAVU (P15102), GLNA5_MAIZE (P38563), 
GLNAC_BRANA (Q42624), GLNAC_MAIZE (P25462), GLNA_ACIFR  (P07804), 
GLNA_ACOCA  (Q9QY94), GLNA_AGABI  (O00088), GLNA_AMAMU  (Q8X169), 
GLNA_ASHGO  (Q75BT9), GLNA_AZOBR  (P10583), GLNA_AZOC5  (P94126), 
GLNA_AZOVI  (P22248), GLNA_BACCE  (P19064), GLNA_BACSU  (P12425), 
GLNA_BOVIN  (P15103), GLNA_CAEEL  (P34497), GLNA_CANFA  (Q8HZM5), 
GLNA_CANGA  (Q6FMT6), GLNA_CHICK  (P16580), GLNA_CLOSA  (P10656), 
GLNA_COLGL  (Q12613), GLNA_CRIGR  (P04773), GLNA_CRYNB  (P0CN85), 
GLNA_CRYNJ  (P0CN84), GLNA_DEBHA  (Q6B4U7), GLNA_ECO57  (P0A9C7), 
GLNA_ECOL6  (P0A9C6), GLNA_ECOLI  (P0A9C5), GLNA_EMENI  (Q96V52), 
GLNA_FUSSH  (Q9UUN6), GLNA_GIBFU  (Q9C2U9), GLNA_HAEIN  (P43794), 
GLNA_HALSA  (Q9HNI2), GLNA_HALVD  (P43386), GLNA_HEBCY  (Q96UV5), 
GLNA_HUMAN  (P15104), GLNA_KLULA  (Q874T6), GLNA_LACDE  (P45627), 
GLNA_LACLA  (Q9CDL9), GLNA_LACSA  (P23712), GLNA_LUPLU  (P52782), 
GLNA_MACFA  (Q4R7U3), GLNA_METCA  (P15124), GLNA_METJA  (Q60182), 
GLNA_METMP  (O59648), GLNA_METTH  (O27612), GLNA_METVO  (P21154), 
GLNA_MICDP  (P33035), GLNA_MIMIV  (Q5UR44), GLNA_MOUSE  (P15105), 
GLNA_NEIGO  (P25821), GLNA_NEUCR  (Q86ZF9), GLNA_NICPL  (P12424), 
GLNA_NOSS1  (P00964), GLNA_PANAR  (Q04831), GLNA_PASMU  (Q9CLP2), 
GLNA_PIG    (P46410), GLNA_PINSY  (P52783), GLNA_PROHU  (P28786), 
GLNA_PSEAE  (Q9HU65), GLNA_PSETA  (Q3V5W6), GLNA_PYRAB  (Q9UY99), 
GLNA_PYRFU  (Q05907), GLNA_PYRHO  (O58097), GLNA_PYRWO  (P36687), 
GLNA_RAT    (P09606), GLNA_RHOCA  (P13499), GLNA_RHOSH  (P43518), 
GLNA_SALTI  (P0A1P7), GLNA_SALTY  (P0A1P6), GLNA_SCHPO  (Q09179), 
GLNA_SHIFL  (P0A9C8), GLNA_SQUAC  (P41320), GLNA_STAAC  (Q5HGC3), 
GLNA_STAAM  (P60890), GLNA_STAAN  (P99095), GLNA_STAAR  (Q6GHC6), 
GLNA_STAAS  (Q6G9Q4), GLNA_STAAU  (P0A040), GLNA_STAAW  (P0A039), 
GLNA_STAEQ  (Q5HPN2), GLNA_STAES  (Q8CSR8), GLNA_STRCO  (P15106), 
GLNA_SUIBO  (Q8J1R3), GLNA_SULAC  (Q9HH09), GLNA_SULSO  (P23794), 
GLNA_SYNP2  (P28605), GLNA_SYNY3  (P77961), GLNA_THEKO  (O08467), 
GLNA_THEMA  (P36205), GLNA_TUBBO  (Q86ZU6), GLNA_VIBAL  (P19904), 
GLNA_VIBCH  (Q9KNJ2), GLNA_VIGAC  (P32289), GLNA_XENLA  (P51121), 
GLNA_YARLI  (Q6C3E0), GLNA_YEAST  (P32288)
» More

UniProtKB/Swiss-Prot
False negative sequences
24 sequences

GLNA1_DICDI (Q86B00), GLNA1_RHILV (P09826), GLNA2_DICDI (P0C7B6), 
GLNA2_MYCBO (P64246), GLNA2_MYCS2 (A0R083), GLNA2_MYCTO (P9WN36), 
GLNA2_MYCTU (P9WN37), GLNA3_DICDI (Q54WR9), GLNA3_RHILP (P31592), 
GLNA3_RHIME (O87393), GLNA_AQUAE  (O66514), GLNA_ARCFU  (O29313), 
GLNA_BACFR  (P15623), GLNA_BUTFI  (Q05650), GLNA_HELPJ  (Q9ZLW5), 
GLNA_HELPY  (P94845), GMAS_METMY  (A9ZPH9), GMAS_METUF  (F5RH07), 
LGSN_CANFA  (Q1ZZS1), LGSN_HUMAN  (Q5TDP6), LGSN_MOUSE  (Q8CIX8), 
LGSN_RABIT  (Q0GA40), LGSN_RAT    (Q7TT51), PUUA_ECOLI  (P78061)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
6 sequences

GLNA2_EMIHU (P81643), GLNA2_PINPS (P81107), GLNA_DUNSA  (P11600), 
GLNA_PHOLP  (P20479), GLNA_TRITH  (P51120), GLNA_VITSX  (P85087)
» More

UniProtKB/Swiss-Prot
False positive sequences
11 sequences

BGBP2_MANSE (Q8ISB6), COR2A_BOVIN (Q32LP9), COR2A_HUMAN (Q92828), 
COR2A_MOUSE (Q8C0P5), EAE_ECO11   (O31000), EAE_ECO27   (P19809), 
EAE_ECO57   (P43261), SPZ2A_WHEAT (Q9ST57), SPZ2B_WHEAT (P93692), 
TRM82_ASPFC (B0XNT4), TRM82_ASPFU (Q4WJR4)
» More

PDB
[Detailed view]
25 PDB

1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 2BVC; 2D3A; 2D3B; 2D3C; 2GLS; 2OJW; 2QC8; 2UU7; 2WHI; 3FKY; 3NG0; 3ZXR; 3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO; 4S0R
» More

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