Entry: PS00191

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General information about the entry

Entry name [info] CYTOCHROME_B5_1
Accession [info] PS00191
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00170

Name and characterization of the entry

Description [info] Cytochrome b5 family, heme-binding domain signature.
Pattern [info]
[FY]-[LIVMK]-{I}-{Q}-H-P-[GA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 118 in 118 different sequences
Number of true positive hits 97 in 97 different sequences
Number of 'unknown' hits
Number of false positive hits 21 in 21 different sequences
Number of false negative sequences 66
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 82.20 %
Recall (true positives / (true positives + false negatives)) 59.51 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] heme_iron at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
97 sequences

ACO1_AJECA  (Q12618), ACO1_YEAST  (P21147), CYB2_HANAN  (P09437), 
CYB2_YEAST  (P00175), CYB52_SCHPO (Q9USM6), CYB5A_ARATH (Q9FDW8), 
CYB5B_ARATH (O48845), CYB5B_HUMAN (O43169), CYB5B_MOUSE (Q9CQX2), 
CYB5B_PONAB (Q5RDJ5), CYB5B_RAT   (P04166), CYB5C_ARATH (Q9ZNV4), 
CYB5D_ARATH (Q9ZWT2), CYB5E_ARATH (Q42342), CYB5L_MIMIV (Q5UR80), 
CYB5L_NEUCR (Q8X0J4), CYB5R_DROME (P19967), CYB5R_DROVI (P50266), 
CYB5S_TOBAC (P49099), CYB5_ALOSE  (P00168), CYB5_BOROF  (O04354), 
CYB5_BOVIN  (P00171), CYB5_BRAOB  (P40934), CYB5_CANTR  (Q874I5), 
CYB5_CHICK  (P00174), CYB5_CUSRE  (P49097), CYB5_DROME  (Q9V4N3), 
CYB5_HORSE  (P00170), CYB5_HUMAN  (P00167), CYB5_MORAP  (Q9Y706), 
CYB5_MOUSE  (P56395), CYB5_MUSDO  (P49096), CYB5_NEUCR  (Q9P5L0), 
CYB5_ORYSJ  (P49100), CYB5_PIG    (P00172), CYB5_RABIT  (P00169), 
CYB5_RAT    (P00173), CYB5_RHIST  (Q9HFV1), CYB5_TOBAC  (P49098), 
CYB5_YEAST  (P40312), CYBL_RHOGR  (P32953), CYP5F_ARATH (O22704), 
FA2H_HUMAN  (Q7L5A8), FA2H_MACFA  (Q4R4P4), FA2H_MOUSE  (Q5MPP0), 
FA2H_RAT    (Q2LAM0), FAD5C_DICDI (Q1ZXQ5), FAD5_MORAP  (O74212), 
IRC21_YEAST (Q04772), NB5R4_BOVIN (Q32LH7), NB5R4_DANRE (Q502I6), 
NB5R4_HUMAN (Q7L1T6), NB5R4_MOUSE (Q3TDX8), NB5R4_RAT   (Q68EJ0), 
NB5R4_XENTR (Q28CZ9), NIA1_ARATH  (P11832), NIA1_BRANA  (P39867), 
NIA1_HORVU  (P27967), NIA1_MAIZE  (P17571), NIA1_ORYSJ  (P16081), 
NIA1_PHAVU  (P39865), NIA1_SOYBN  (P54233), NIA1_TOBAC  (P11605), 
NIA2_ARATH  (P11035), NIA2_BRANA  (P39868), NIA2_HORVU  (P27969), 
NIA2_PHAVU  (P39866), NIA2_SOYBN  (P39870), NIA2_TOBAC  (P08509), 
NIA3_MAIZE  (P49102), NIA7_HORVU  (P27968), NIA_ASPNG   (P36858), 
NIA_BEABA   (P43100), NIA_BETPN   (P27783), NIA_CHLVU   (Q01170), 
NIA_CICIN   (P43101), NIA_CUCMA   (P17569), NIA_EMENI   (P22945), 
NIA_FUSOX   (P39863), NIA_LEPMC   (P36842), NIA_LOTJA   (P39869), 
NIA_NEUCR   (P08619), NIA_PETHY   (P36859), NIA_PHYIN   (P39864), 
NIA_PICAN   (P49050), NIA_SOLLC   (P17570), NIA_SPIOL   (P23312), 
NIA_USTMA   (Q05531), NIA_VOLCA   (P36841), RLF_ARATH   (Q9LXD1), 
SCS7_YEAST  (Q03529), SUOX_CHICK  (P07850), SUOX_DROME  (Q9VWP4), 
SUOX_HUMAN  (P51687), SUOX_MOUSE  (Q8R086), SUOX_RAT    (Q07116), 
YDAA_SCHPO  (Q10352)
» More

UniProtKB/Swiss-Prot
False negative sequences
66 sequences

ACO1_SCHPO  (O94523), CB5D1_DANRE (Q567I9), CB5D1_HUMAN (Q6P9G0), 
CB5D1_MOUSE (Q5NCY3), CB5D1_PONAB (Q5R4Q5), CB5D1_XENLA (Q5PPR6), 
CB5D1_XENTR (Q0IHR1), CYB5_ECTSH  (P82291), DAP1_SCHPO  (O13995), 
DAP1_YEAST  (Q12091), FAD5A_DICDI (Q9Y1W0), FAD5B_DICDI (O96099), 
FADS1_HUMAN (O60427), FADS1_MOUSE (Q920L1), FADS1_PAPAN (A4UVI1), 
FADS1_RAT   (Q920R3), FADS2_BOVIN (A4FV48), FADS2_DANRE (Q9DEX7), 
FADS2_HUMAN (O95864), FADS2_MACFA (Q4R749), FADS2_MOUSE (Q9Z0R9), 
FADS2_PONAB (Q5REA7), FADS2_RAT   (Q9Z122), FADS3_HUMAN (Q9Y5Q0), 
FADS3_MOUSE (Q9JJE7), FADS3_RAT   (Q8K1P9), FAT3_CAEEL  (Q23221), 
FAT4_CAEEL  (G5EG11), HERC2_HUMAN (O95714), HERC2_MOUSE (Q4U2R1), 
MAPR4_ARATH (Q2HIW2), MSBP1_ARATH (Q9XFM6), MSBP2_ARATH (Q9M2Z4), 
NENF_BOVIN  (Q1JQA5), NENF_HUMAN  (Q9UMX5), NENF_MOUSE  (Q9CQ45), 
NENF_RAT    (Q6IUR5), NEUFC_CAEBR (Q60YT6), NEUFC_CAEEL (Q9XXA7), 
NEUFC_DANRE (A2CES0), NEUFC_DROME (Q9W376), NEUFC_DROPS (Q29HF1), 
NEUFC_HUMAN (Q8WUJ1), NEUFC_MOUSE (Q5SSH8), NEUFC_RAT   (Q6AY62), 
NEUFC_XENTR (Q28FI8), PGRC1_BOVIN (Q17QC0), PGRC1_CHICK (Q5ZKN2), 
PGRC1_HUMAN (O00264), PGRC1_MOUSE (O55022), PGRC1_PIG   (Q95250), 
PGRC1_PONAB (Q5RED0), PGRC1_RAT   (P70580), PGRC2_HUMAN (O15173), 
PGRC2_MOUSE (Q80UU9), PGRC2_RAT   (Q5XIU9), SBP3_ARATH  (Q9SK39), 
SLD1_ARATH  (Q9ZRP7), SLD1_BOROF  (Q9FR82), SLD1_EUGGR  (Q9SWQ9), 
SLD1_HELAN  (Q43469), SLD1_KLULA  (Q6CMK7), SLD1_KLULC  (Q8NKG8), 
SLD1_LACK1  (Q8NKG9), SLD2_ARATH  (Q3EBF7), SUOX_MACFA  (Q60HD0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

NIA2_MAIZE  (P39871), NIA_LOTTE   (P39882)

		
UniProtKB/Swiss-Prot
False positive sequences
21 sequences

CDK14_CALJA (B0VXE8), CDK14_CALMO (B0VXL7), CDK14_DASNO (C0RW22), 
CDK14_HUMAN (O94921), CDK14_MOUSE (O35495), CDK14_RABIT (B6A7Q3), 
CDK14_XENLA (Q6DJM7), CDK14_XENTR (A4IIW7), CO057_MOUSE (Q8BS39), 
CO057_RAT   (Q561K4), HYAL3_PIG   (Q6RHW2), LAR1B_HUMAN (Q659C4), 
LARP1_HUMAN (Q6PKG0), LARP1_MOUSE (Q6ZQ58), MATK_WEDBI  (Q6JVN2), 
MSRAB_HELPJ (Q9ZMK8), PPCEL_XENLA (Q32N48), SFSA_METS4  (B0ULY8), 
VCLY_TEGPF  (P07447), VILI_BOVIN  (Q3SZP7), VILL_HUMAN  (O15195)
» More


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