Entry: PS00202

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General information about the entry

Entry name [info] RUBREDOXIN
Accession [info] PS00202
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00179

Name and characterization of the entry

Description [info] Rubredoxin signature.
Pattern [info]
[LIVM]-x-{G}-{R}-W-x-C-P-x-C-[AGD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 51 in 48 different sequences
Number of true positive hits 48 in 45 different sequences
Number of 'unknown' hits
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.12 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron at position 7
Site [info] iron at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
45 sequences

ATG35_PICPG (C4QVX6), HRB_MOOTA   (Q9FDN6), HUPJ_RHOCA  (Q03009), 
RUBH_METTH  (Q50533), RUBL_BRADU  (P48344), RUBL_RHILV  (P28151), 
RUBR1_ALCBS (Q0VTA9), RUBR1_DESDA (P04170), RUBR1_PSEAE (Q9HTK7), 
RUBR1_PSEOL (P12692), RUBR1_PSEPU (Q9WWW4), RUBR2_ALCBS (Q0VKZ2), 
RUBR2_CHLTE (P58993), RUBR2_CLOPE (P14072), RUBR2_DESDA (Q93PP8), 
RUBR2_PSEAE (Q9HTK8), RUBR2_PSEOL (P00272), RUBR2_PSEPU (Q9WWW5), 
RUBR2_RHOER (Q9AE63), RUBR3_CHLTE (P58025), RUBR3_RHOER (P0A4E8), 
RUBR3_RHOSQ (P0A4E9), RUBR4_RHOER (P0A4F0), RUBR4_RHOSQ (P0A4F1), 
RUBR_ACIAD  (P42453), RUBR_AZOCH  (P48343), RUBR_AZOVI  (P30778), 
RUBR_BUTME  (P14071), RUBR_CHLTI  (P09947), RUBR_CLOAB  (Q9AL94), 
RUBR_CLOPA  (P00268), RUBR_CLOSD  (P23474), RUBR_CUPNH  (P31912), 
RUBR_DESGI  (P00270), RUBR_DESVH  (P00269), RUBR_DESVM  (P15412), 
RUBR_HELMO  (P56263), RUBR_MEGEL  (P00271), RUBR_METTH  (O26258), 
RUBR_PEPAS  (P00267), RUBR_PYRAB  (Q9V099), RUBR_PYRFU  (P24297), 
RUBR_SYNY3  (P73068), RUBR_THETC  (P19500), RUBR_TREPA  (O83956)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

RUBR1_CHLTE (P58992), RUBR1_CLOPE (Q8XMB2), RUBR1_METJA (Q58145), 
RUBR2_METJA (Q58150), RUBR_ANAVT  (Q9XBL8), RUBR_NOSS1  (Q9WWN1)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

DHX34_HUMAN (Q14147), DHX34_MOUSE (Q9DBV3), STX19_BOVIN (Q0VCI2)

		
PDB
[Detailed view]
66 PDB

1B13; 1B2J; 1B2O; 1BFY; 1BQ8; 1BQ9; 1BRF; 1C09; 1CAA; 1CAD; 1E8J; 1FHH; 1FHM; 1IRN; 1IRO; 1IU5; 1IU6; 1R0F; 1R0G; 1R0H; 1R0I; 1R0J; 1RB9; 1RDG; 1RDV; 1RWD; 1S24; 1SMM; 1SMU; 1SMW; 1SPW; 1T9O; 1T9P; 1T9Q; 1VCX; 1YK4; 1YK5; 1ZRP; 2DSX; 2KKD; 2PVE; 2PVX; 2PYA; 2QL0; 2RDV; 2V3B; 3KYU; 3KYV; 3KYW; 3KYX; 3KYY; 3RYG; 3RZ6; 3RZT; 3SS2; 4AR3; 4AR4; 4AR5; 4AR6; 4K9F; 4MBS; 4RXN; 5RXN; 6RXN; 7RXN; 8RXN
» More

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