Entry: PS00210

General information about the entry
Entry name HEMOCYANIN_2
Accession number PS00210
Entry type PATTERN
Date APR-1990 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00184
Name and characterization of the entry
DescriptionArthropod hemocyanins / insect LSPs signature 2.
Pattern T-x(2)-R-D-P-x-[FY]-[FYW].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 48 hits in 48 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 45 hits in 45 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 3 hits in 3 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 33
  • Precision (true hits / (true hits + false positives)): 93.75 %
  • Recall (true hits / (true hits + false negatives)): 95.74 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AJSP1_TRINI (P22327), ARY1_CALVI  (P28513), ARY2_CALVI  (P28514), 
ARYA_MANSE  (P14296), ARYB_MANSE  (P14297), ARY_ANTPE   (Q7Z1F8), 
BJSB1_TRINI (Q06342), BJSB2_TRINI (Q06343), CRPI_PERAM  (Q25641), 
HCY2_CARAE  (P84293), HCY2_LIMPO  (P04253), HCY6_ANDAU  (P80476), 
HCYA_APHCL  (P14750), HCYA_PANIN  (P04254), HCYA_SCUCO  (Q95P08), 
HCYB_APHCL  (Q9NFH9), HCYB_PANIN  (P10787), HCYB_PONLE  (P83180), 
HCYB_SCUCO  (Q8IFJ8), HCYC_APHCL  (Q9NFL6), HCYC_PANIN  (P80096), 
HCYC_SCUCO  (Q8T115), HCYD_APHCL  (P02241), HCYD_SCUCO  (Q95P07), 
HCYE_APHCL  (P02242), HCYF_APHCL  (Q9NFL5), HCYG_APHCL  (Q9NFL4), 
HCYX_SCUCO  (Q8T116), HCY_PALVU   (P80888), HEXA_ANOGA  (Q17020), 
LSP1A_DROME (P11995), LSP1B_DROME (P11996), LSP1G_DROME (P11997), 
LSP2_DROME  (Q24388), PHCY1_HOMAM (Q6KF82), PHCY2_HOMAM (Q6KF81), 
PRP1_BOMMO  (Q27451), PRP1_MANSE  (O44249), PRP2_BOMMO  (Q27452), 
PRP2_MANSE  (Q25519), PRPA3_DROME (Q9V521), PRPD3_DROER (Q8I1F6), 
PRPD3_DROME (Q9W1V6), SSP1_BOMMO  (P09179), SSP2_BOMMO  (P20613)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
HC2C_MEGCR  (P81732), HEXA_BLADI  (Q17127)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
HCY1_HOMAM  (P82296), HCY1_LIODE  (P84461), HCY1_MAISQ  (P82302), 
HCY1_NECPU  (P84846), HCY2_HOMAM  (P82297), HCY2_LIODE  (P84462), 
HCY2_MAISQ  (P82303), HCY2_PANJA  (P82312), HCY3_HOMAM  (P82298), 
HCY3_MAISQ  (P82304), HCY3_PANJA  (P82313), HCY4E_MAISQ (P82306), 
HCY4_CARMA  (P82309), HCY4_HOMAM  (P82299), HCY4_MAISQ  (P82305), 
HCY5_HOMAM  (P82300), HCY5_MAISQ  (P82307), HCY6_HOMAM  (P82301), 
HCY6_MAISQ  (P82308), HCYA_CONCC  (P84619), HCYA_MEGCR  (Q10583), 
HCYA_TACTR  (P02243), HCYB_CONCC  (P84620), HCYB_MEGCR  (Q10584), 
HCYIA_PANJA (P82310), HCYIB_PANJA (P82311), LEC_LITSE   (P84821), 
PHCY_LIODE  (P84460), PHCY_LIOHO  (P84768), PHCY_LIOMA  (P84769), 
PHCY_NECPU  (P84847), PRP1_SIMDA  (P85046), SSP1_AMSAL  (P84632)
False positive hits (sequences which do not belong to the set under consideration):
DBP10_USTMA (Q4P3W3), PPO_VITVI   (P43311), SORT_HUMAN  (Q99523)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1HC1; 1HCY; 1LL1; 1LLA; 1NOL; 1OXY; 3GWJ; 3HHS; 3IXV; 3IXW;

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