Entry: PS00214

General information about the entry

Entry name [info] FABP
Accession [info] PS00214
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00188

Name and characterization of the entry

Description [info] Cytosolic fatty-acid binding proteins signature.
Pattern [info]
[GSAIVK]-{FE}-[FYW]-x-[LIVMF]-x(2)-{K}-x-[NHG]-[FY]-[DE]-x-[LIVMFY]-
[LIVM]-{N}-{G}-[LIVMAKR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 134 in 134 different sequences
Number of true positive hits 107 in 107 different sequences
Number of 'unknown' hits 0
Number of false positive hits 27 in 27 different sequences
Number of false negative sequences 14
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 79.85 %
Recall (true positives / (true positives + false negatives)) 88.43 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
107 sequences

FA10A_DANRE (Q9I8L5    ), FAB1A_DANRE (Q1AMT3    ), FABH_ASCSU  (P55776    ), 
FABP1_AMBME (P81399    ), FABP1_CAEEL (Q20223    ), FABP1_ECHGR (Q02970    ), 
FABP1_MANSE (P31416    ), FABP2_AMBME (P81400    ), FABP2_CAEEL (Q20224    ), 
FABP2_ECHGR (Q9BMK3    ), FABP2_MANSE (P31417    ), FABP3_CAEEL (Q20222    ), 
FABP4_BOVIN (P48035    ), FABP4_CAEEL (Q23092    ), FABP4_CEREL (A6YLM6    ), 
FABP4_HUMAN (P15090    ), FABP4_ICTTR (Q99P60    ), FABP4_MOUSE (P04117    ), 
FABP4_PIG   (O97788    ), FABP4_RAT   (P70623    ), FABP5_BOVIN (P55052    ), 
FABP5_CAEEL (O01814    ), FABP5_HUMAN (Q01469    ), FABP5_MOUSE (Q05816    ), 
FABP5_RAT   (P55053    ), FABP6_CAEEL (O01812    ), FABP6_HUMAN (P51161    ), 
FABP6_MOUSE (P51162    ), FABP6_PIG   (P10289    ), FABP6_RABIT (P50119    ), 
FABP6_RAT   (P80020    ), FABP7_BOVIN (Q09139    ), FABP7_CAEEL (O02323    ), 
FABP7_CHICK (Q05423    ), FABP7_HUMAN (O15540    ), FABP7_MOUSE (P51880    ), 
FABP7_RAT   (P55051    ), FABP9_CAEEL (Q965W1    ), FABP9_HUMAN (Q0Z7S8    ), 
FABP9_MOUSE (O08716    ), FABP9_RAT   (P55054    ), FABPH_BOSMU (Q4TZH2    ), 
FABPH_BOVIN (P10790    ), FABPH_HUMAN (P05413    ), FABPH_ICTTR (Q99P61    ), 
FABPH_MOUSE (P11404    ), FABPH_MYOLU (Q865F7    ), FABPH_ONCMY (O13008    ), 
FABPH_PIG   (O02772    ), FABPH_RAT   (P07483    ), FABPI_BOVIN (Q56JX9    ), 
FABPI_HUMAN (P12104    ), FABPI_MOUSE (P55050    ), FABPI_PIG   (Q45KW7    ), 
FABPI_RAT   (P02693    ), FABPI_XENLA (Q91775    ), FABPL_ANOPU (Q90239    ), 
FABPL_BOVIN (P80425    ), FABPL_CHICK (P80226    ), FABPL_GINCI (P80049    ), 
FABPL_HUMAN (P07148    ), FABPL_LEPPA (P82289    ), FABPL_LITCT (P0C241    ), 
FABPL_MOUSE (P12710    ), FABPL_PIG   (P49924    ), FABPL_RAT   (P02692    ), 
FABPL_RHASA (P80856    ), FABPL_RHIAE (P83409    ), FABPM_LOCMI (P41509    ), 
FABPM_SCHGR (P41496    ), FABP_ACASI  (O76821    ), FABP_ANOGA  (Q17017    ), 
FABP_BLOTA  (Q17284    ), FABP_CLOSI  (Q8MUC1    ), FABP_LEPDS  (Q9U5P1    ), 
FABP_SCHJA  (O45035    ), FABP_SCHMA  (P29498    ), MYP2_BOVIN  (P02690    ), 
MYP2_HORSE  (P0C6G6    ), MYP2_HUMAN  (P02689    ), MYP2_MOUSE  (P24526    ), 
MYP2_PIG    (P86412    ), MYP2_RABIT  (P02691    ), RABP1_BOVIN (P62964    ), 
RABP1_CHICK (P40220    ), RABP1_HIPCM (Q6T499    ), RABP1_HUMAN (P29762    ), 
RABP1_MOUSE (P62965    ), RABP1_PELSI (Q5R2J5    ), RABP1_RAT   (P62966    ), 
RABP1_TAKRU (O42386    ), RABP2_BOVIN (Q5PXY7    ), RABP2_CHICK (P30370    ), 
RABP2_HUMAN (P29373    ), RABP2_MOUSE (P22935    ), RABP2_RAT   (P51673    ), 
RABP2_XENLA (P50568    ), RET1_BOVIN  (P02694    ), RET1_HUMAN  (P09455    ), 
RET1_MOUSE  (Q00915    ), RET1_RAT    (P02696    ), RET2_HUMAN  (P50120    ), 
RET2_MOUSE  (Q08652    ), RET2_PIG    (P50121    ), RET2_RAT    (P06768    ), 
RET7_HUMAN  (Q96R05    ), RET7_MOUSE  (Q9EPC5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

FABP1_FASGI (Q9UAS2    ), FABP1_FASHE (Q7M4G0    ), FABP2_FASHE (Q7M4G1    ), 
FABP3_FASHE (Q9U1G6    ), FABPL_CHAVI (P82145    ), FABPL_SCHBI (P81653    ), 
FBP12_HUMAN (A6NFH5    ), FBP12_MOUSE (Q9DAK4    ), FBP12_RAT   (B7SUM8    ), 
IOTA_GONVI  (P82025    ), RET5_BOVIN  (P82708    ), RET5_HUMAN  (P82980    ), 
RET5_PONAB  (Q5RBM7    ), UNAG_ANGJA  (P0DM59    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

FABPI_RHASA (P81175    ), FABPL_LETCA (P82188    )

		
UniProtKB/Swiss-Prot
False positive sequences
27 sequences

DPOL_METJA  (Q58295    ), FB278_ARATH (Q9FFS9    ), GLPG_PECAS  (Q6CZL3    ), 
LPTD_FRAT1  (Q14IY9    ), LPTD_FRATH  (Q2A216    ), LPTD_FRATN  (A0Q5D8    ), 
LPTD_FRATO  (Q0BKP5    ), LPTD_FRATT  (Q5NHI7    ), MFNA_PYRFU  (Q8U1P6    ), 
MFNA_PYRHO  (O58679    ), MRAZ_RICPR  (Q9ZCY1    ), MRAZ_RICTY  (Q68WG6    ), 
MUT7_CAEEL  (P34607    ), ORR12_ORYSJ (Q2HWG1    ), ORR13_ORYSJ (Q2HWG0    ), 
PYRG_NITHX  (Q1QMJ4    ), PYRG_RHOP2  (Q2IWB8    ), PYRG_RICBR  (Q1RHU4    ), 
PYRG_RICCN  (Q92I97    ), PYRG_RICFE  (Q4ULX9    ), PYRG_RICPR  (Q9ZDF1    ), 
PYRG_RICTY  (Q68WZ6    ), RRAGC_HUMAN (Q9HB90    ), RRAGC_MOUSE (Q99K70    ), 
SYFB_MESFL  (Q6F166    ), SYR_METHJ   (Q2FS66    ), ZWILC_CAEEL (Q95XP9    )
» more

PDB
[Detailed view]
231 PDB

1A18; 1A2D; 1AB0; 1ACD; 1ADL; 1AEL; 1ALB; 1B4M; 1B56; 1BLR; 1BM5; 1BWY; 1CBI; 1CBQ; 1CBR; 1CBS; 1CRB; 1DC9; 1EAL; 1EII; 1EIO; 1FDQ; 1FE3; 1FTP; 1G5W; 1G74; 1G7N; 1HMR; 1HMS; 1HMT; 1ICM; 1ICN; 1IFB; 1IFC; 1JBH; 1JJJ; 1JJX; 1KGL; 1KZW; 1KZX; 1LFO; 1LIB; 1LIC; 1LID; 1LIE; 1LIF; 1LPJ; 1MDC; 1MVG; 1MX7; 1MX8; 1O1U; 1O1V; 1O8V; 1OPA; 1OPB; 1P6P; 1PMP; 1T8V; 1TOU; 1TOW; 1TVQ; 1TW4; 1URE; 1VYF; 1VYG; 1XCA; 1YIV; 1ZRY; 2ANS; 2CBR; 2CBS; 2F73; 2FLJ; 2FR3; 2FS6; 2FS7; 2FT9; 2FTB; 2G78; 2G79; 2G7B; 2HMB; 2HNX; 2IFB; 2JN3; 2JU3; 2JU7; 2JU8; 2K62; 2L67; 2L68; 2LFO; 2LKK; 2MJI; 2MM3; 2MO5; 2NNQ; 2POA; 2PY1; 2Q9S; 2QM9; 2QO4; 2QO5; 2QO6; 2RCQ; 2RCT; 2WUT; 3AKM; 3AKN; 3B2H; 3B2I; 3B2J; 3B2K; 3B2L; 3CBS; 3CR6; 3CWK; 3D95; 3D96; 3D97; 3F8A; 3F9D; 3FA6; 3FA7; 3FA8; 3FA9; 3FEK; 3FEL; 3FEN; 3FEP; 3FR2; 3FR4; 3FR5; 3HK1; 3I17; 3IFB; 3JS1; 3JSQ; 3NR3; 3P6C; 3P6D; 3P6E; 3P6F; 3P6G; 3P6H; 3Q6L; 3RSW; 3RZY; 3STK; 3STM; 3STN; 3VG2; 3VG3; 3VG4; 3VG5; 3VG6; 3VG7; 3WBG; 3WVM; 3WXQ; 4A1H; 4A1Y; 4A60; 4A8Z; 4AZM; 4AZN; 4AZO; 4AZP; 4AZQ; 4AZR; 4BVM; 4D6A; 4D6B; 4EXZ; 4I9R; 4I9S; 4LKP; 4LKT; 4M6S; 4M7M; 4NNS; 4NNT; 4QGV; 4QGW; 4QGX; 4QYN; 4QYP; 4QZT; 4QZU; 4RUU; 4TJZ; 4TKB; 4TKH; 4TKJ; 4WBK; 4YBP; 4YBU; 4YCE; 4YCH; 4YDA; 4YDB; 4YFP; 4YFQ; 4YFR; 4YGG; 4YGH; 4YGZ; 4YH0; 4YKM; 4YKO; 4ZCB; 4ZGU; 4ZH6; 4ZH9; 4ZJ0; 4ZR2; 5C0N; 5CE4; 5D45; 5D47; 5D48; 5D4A; 5D8J; 5EDB; 5EDC; 5H8T; 5H9A; 5HA1; 5HBS; 5HZQ
» more

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