Entry: PS00218

General information about the entry

Entry name [info] AMINO_ACID_PERMEASE_1
Accession [info] PS00218
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUL-1999 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00191

Name and characterization of the entry

Description [info] Amino acid permeases signature.
Pattern [info]
[STAGC]-G-[PAG]-x(2,3)-[LIVMFYWA](2)-x-[LIVMFYW]-x-[LIVMFWSTAGC](2)-
[STAGC]-x(3)-[LIVMFYWT]-x-[LIVMST]-x(3)-[LIVMCTA]-[GA]-E-x(5)-[PSAL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 80 in 80 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 35
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.77 %
Recall (true positives / (true positives + false negatives)) 69.57 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
80 sequences

AAP1_SCHPO  (Q92367), AAP2_NEUCR  (O59942), AAPA_BACSU  (O06005), 
AAT1_SCHPO  (Q9P5N2), AGP1_SACU7  (Q876K6), AGP1_YEAS7  (A6ZTG5), 
AGP1_YEAST  (P25376), AGP2_YEAST  (P38090), AGP3_YEAST  (P43548), 
ALP1_YEAST  (P38971), ANSP1_MYCBO (Q7VEQ4), ANSP1_MYCTO (P9WQM8), 
ANSP1_MYCTU (P9WQM9), ANSP2_MYCBO (P0A4W1), ANSP2_MYCTO (P9WQM6), 
ANSP2_MYCTU (P9WQM7), ANSP_ECOLI  (P77610), ANSP_SALTY  (P40812), 
ANSP_STRCO  (Q9X7P0), AROP_CORGL  (Q46065), AROP_ECO57  (Q8X968), 
AROP_ECOL6  (Q8FL49), AROP_ECOLI  (P15993), AROP_SALTI  (P0A188), 
AROP_SALTS  (E1W822), AROP_SALTY  (P0CK99), AROP_SHIFL  (P59737), 
BAP2_YEAST  (P38084), BAP3_YEAST  (P41815), BAUD_PSEAE  (Q9I703), 
CAN1_CANAW  (P43059), CAN1_YEAST  (P04817), CAT1_SCHPO  (Q9URZ4), 
CYCA_ECO57  (P0AAE1), CYCA_ECOLI  (P0AAE0), DIP5_YEAST  (P53388), 
GABP_BACSU  (P46349), GABP_ECOLI  (P25527), GAP1_YEAST  (P19145), 
GNP1_YEAST  (P48813), HIP1_YEAST  (P06775), HNM1_YEAST  (P19807), 
HUTM_BACSU  (P42087), INDA1_HYPAT (P34054), ISP5_SCHPO  (P40901), 
LYP1_YEAST  (P32487), LYSP_ECOLI  (P25737), MEU22_SCHPO (O60170), 
MMUP_ECOLI  (Q47689), PHEP_ECOLI  (P24207), PROY_ECO57  (P0AAE4), 
PROY_ECOL6  (P0AAE3), PROY_ECOLI  (P0AAE2), PROY_SALTY  (P37460), 
PUT4_SCHPO  (Q9URZ3), PUT4_YEAST  (P15380), PUTX_EMENI  (P18696), 
ROCC_BACSU  (P39636), ROCE_BACSU  (P39137), SAM3_YEAST  (Q08986), 
TAT1_YEAST  (P38085), TAT2_YEAST  (P38967), TPO5_YEAST  (P36029), 
UGA4_YEAST  (P32837), YAO8_SCHPO  (Q10087), YBGF_BACSU  (O31462), 
YBXG_BACSU  (P54425), YCV4_SCHPO  (O74543), YDGF_BACSU  (P96704), 
YG64_SCHPO  (O60113), YH81_SCHPO  (Q9P5N4), YHE1_SCHPO  (Q9HDV2), 
YI26_SCHPO  (Q9P768), YIFK_ECOLI  (P27837), YIFK_SALTI  (P0A190), 
YIFK_SALTY  (P0A189), YP51_SCHPO  (B5BP45), YPEV_LACDL  (P45495), 
YQD2_SCHPO  (Q9C0V0), YTNA_BACSU  (O34618)
» More

UniProtKB/Swiss-Prot
False negative sequences
35 sequences

GPT1_CANAX  (O74248), MMP1_YEAST  (Q12372), PLAP_ECO57  (P0AA48), 
PLAP_ECOLI  (P0AA47), PUUP_ECOLI  (P76037), SSY1_YEAST  (Q03770), 
STET_BACSU  (O34739), THI9_SCHPO  (Q9UT18), Y093_RHIME  (O87394), 
Y1691_LEGPH (P37034), Y1979_MYCTO (P9WQM4), Y1979_MYCTU (P9WQM5), 
Y1999_MYCTO (P9WQM2), Y1999_MYCTU (P9WQM3), Y2001_MYCBO (Q7TZ67), 
Y2022_MYCBO (P63350), YBAT_ECOLI  (P77400), YC9D_SCHPO  (Q09887), 
YCGH_BACSU  (P94383), YCQ4_SCHPO  (O74537), YCT3_SCHPO  (O59813), 
YCUB_SCHPO  (O59831), YDAO_BACSU  (P96589), YECA_BACSU  (O34560), 
YFZ1_SCHPO  (Q9US40), YKAA_CAEEL  (P34261), YLAT1_HUMAN (Q9UM01), 
YLAT1_MOUSE (Q9Z1K8), YLAT1_RAT   (Q9R0S5), YLAT2_DANRE (Q59I64), 
YLAT2_HUMAN (Q92536), YLAT2_MOUSE (Q8BGK6), YLAT2_XENLA (A1L3M3), 
YLAT2_XENTR (Q28I80), YVBW_BACSU  (O32257)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PLAP_KLEPN  (P37103)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

FAM3B_HUMAN (P58499)

		

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