Entry: PS00218

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General information about the entry

Entry name [info] AMINO_ACID_PERMEASE_1
Accession [info] PS00218
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUL-1999 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00191

Name and characterization of the entry

Description [info] Amino acid permeases signature.
Pattern [info]
[STAGC]-G-[PAG]-x(2,3)-[LIVMFYWA](2)-x-[LIVMFYW]-x-[LIVMFWSTAGC](2)-
[STAGC]-x(3)-[LIVMFYWT]-x-[LIVMST]-x(3)-[LIVMCTA]-[GA]-E-x(5)-[PSAL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 80 in 80 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 35
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.77 %
Recall (true positives / (true positives + false negatives)) 69.57 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
80 sequences

AAP1_SCHPO  (Q92367), AAP2_NEUCR  (O59942), AAPA_BACSU  (O06005), 
AAT1_SCHPO  (Q9P5N2), AGP1_SACU7  (Q876K6), AGP1_YEAS7  (A6ZTG5), 
AGP1_YEAST  (P25376), AGP2_YEAST  (P38090), AGP3_YEAST  (P43548), 
ALP1_YEAST  (P38971), ANSP1_MYCBO (Q7VEQ4), ANSP1_MYCTO (P9WQM8), 
ANSP1_MYCTU (P9WQM9), ANSP2_MYCBO (P0A4W1), ANSP2_MYCTO (P9WQM6), 
ANSP2_MYCTU (P9WQM7), ANSP_ECOLI  (P77610), ANSP_SALTY  (P40812), 
ANSP_STRCO  (Q9X7P0), AROP_CORGL  (Q46065), AROP_ECO57  (Q8X968), 
AROP_ECOL6  (Q8FL49), AROP_ECOLI  (P15993), AROP_SALTI  (P0A188), 
AROP_SALTS  (E1W822), AROP_SALTY  (P0CK99), AROP_SHIFL  (P59737), 
BAP2_YEAST  (P38084), BAP3_YEAST  (P41815), BAUD_PSEAE  (Q9I703), 
CAN1_CANAW  (P43059), CAN1_YEAST  (P04817), CAT1_SCHPO  (Q9URZ4), 
CYCA_ECO57  (P0AAE1), CYCA_ECOLI  (P0AAE0), DIP5_YEAST  (P53388), 
GABP_BACSU  (P46349), GABP_ECOLI  (P25527), GAP1_YEAST  (P19145), 
GNP1_YEAST  (P48813), HIP1_YEAST  (P06775), HNM1_YEAST  (P19807), 
HUTM_BACSU  (P42087), INDA1_HYPAT (P34054), ISP5_SCHPO  (P40901), 
LYP1_YEAST  (P32487), LYSP_ECOLI  (P25737), MEU22_SCHPO (O60170), 
MMUP_ECOLI  (Q47689), PHEP_ECOLI  (P24207), PROY_ECO57  (P0AAE4), 
PROY_ECOL6  (P0AAE3), PROY_ECOLI  (P0AAE2), PROY_SALTY  (P37460), 
PUT4_SCHPO  (Q9URZ3), PUT4_YEAST  (P15380), PUTX_EMENI  (P18696), 
ROCC_BACSU  (P39636), ROCE_BACSU  (P39137), SAM3_YEAST  (Q08986), 
TAT1_YEAST  (P38085), TAT2_YEAST  (P38967), TPO5_YEAST  (P36029), 
UGA4_YEAST  (P32837), YAO8_SCHPO  (Q10087), YBGF_BACSU  (O31462), 
YBXG_BACSU  (P54425), YCV4_SCHPO  (O74543), YDGF_BACSU  (P96704), 
YG64_SCHPO  (O60113), YH81_SCHPO  (Q9P5N4), YHE1_SCHPO  (Q9HDV2), 
YI26_SCHPO  (Q9P768), YIFK_ECOLI  (P27837), YIFK_SALTI  (P0A190), 
YIFK_SALTY  (P0A189), YP51_SCHPO  (B5BP45), YPEV_LACDL  (P45495), 
YQD2_SCHPO  (Q9C0V0), YTNA_BACSU  (O34618)
» More

UniProtKB/Swiss-Prot
False negative sequences
35 sequences

GPT1_CANAX  (O74248), MMP1_YEAST  (Q12372), PLAP_ECO57  (P0AA48), 
PLAP_ECOLI  (P0AA47), PUUP_ECOLI  (P76037), SSY1_YEAST  (Q03770), 
STET_BACSU  (O34739), THI9_SCHPO  (Q9UT18), Y093_RHIME  (O87394), 
Y1691_LEGPH (P37034), Y1979_MYCTO (P9WQM4), Y1979_MYCTU (P9WQM5), 
Y1999_MYCTO (P9WQM2), Y1999_MYCTU (P9WQM3), Y2001_MYCBO (Q7TZ67), 
Y2022_MYCBO (P63350), YBAT_ECOLI  (P77400), YC9D_SCHPO  (Q09887), 
YCGH_BACSU  (P94383), YCQ4_SCHPO  (O74537), YCT3_SCHPO  (O59813), 
YCUB_SCHPO  (O59831), YDAO_BACSU  (P96589), YECA_BACSU  (O34560), 
YFZ1_SCHPO  (Q9US40), YKAA_CAEEL  (P34261), YLAT1_HUMAN (Q9UM01), 
YLAT1_MOUSE (Q9Z1K8), YLAT1_RAT   (Q9R0S5), YLAT2_DANRE (Q59I64), 
YLAT2_HUMAN (Q92536), YLAT2_MOUSE (Q8BGK6), YLAT2_XENLA (A1L3M3), 
YLAT2_XENTR (Q28I80), YVBW_BACSU  (O32257)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PLAP_KLEPN  (P37103)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

FAM3B_HUMAN (P58499)

		

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