Entry: PS00222

General information about the entry

Entry name [info] IGFBP_N_1
Accession [info] PS00222
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00194

Name and characterization of the entry

Description [info] Insulin-like growth factor-binding protein (IGFBP) N-terminal domain signature.
Pattern [info]
[GP]-C-[GSET]-[CE]-[CA]-x(2)-C-[ALP]-x(6)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 60 in 60 different sequences
Number of true positive hits 60 in 60 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 76.92 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
60 sequences

CTGF_BOVIN  (O18739    ), CTGF_HUMAN  (P29279    ), CTGF_MOUSE  (P29268    ), 
CTGF_PIG    (O19113    ), CTGF_RAT    (Q9R1E9    ), CYR61_CHICK (P19336    ), 
CYR61_HUMAN (O00622    ), CYR61_MOUSE (P18406    ), CYR61_PANTR (A5A6L1    ), 
CYR61_RAT   (Q9ES72    ), IBP1_BOVIN  (P24591    ), IBP1_HUMAN  (P08833    ), 
IBP1_ICTTR  (Q6Q484    ), IBP1_MOUSE  (P47876    ), IBP1_RAT    (P21743    ), 
IBP2A_DANRE (Q9PTH3    ), IBP2B_DANRE (B3F211    ), IBP2_BOVIN  (P13384    ), 
IBP2_CHICK  (P49705    ), IBP2_HUMAN  (P18065    ), IBP2_MOUSE  (P47877    ), 
IBP2_PIG    (P24853    ), IBP2_RAT    (P12843    ), IBP2_SHEEP  (Q29400    ), 
IBP2_XENLA  (Q5XHC5    ), IBP2_XENTR  (A4IIA2    ), IBP3_BOVIN  (P20959    ), 
IBP3_HUMAN  (P17936    ), IBP3_MOUSE  (P47878    ), IBP3_PIG    (P16611    ), 
IBP3_RAT    (P15473    ), IBP4_BOVIN  (Q05716    ), IBP4_HUMAN  (P22692    ), 
IBP4_MOUSE  (P47879    ), IBP4_PIG    (P24854    ), IBP4_RAT    (P21744    ), 
IBP4_SHEEP  (Q28893    ), IBP5_BOVIN  (Q05717    ), IBP5_HUMAN  (P24593    ), 
IBP5_MOUSE  (Q07079    ), IBP5_PIG    (Q28985    ), IBP5_RAT    (P24594    ), 
IBP5_XENLA  (Q90WV8    ), IBP6_MOUSE  (P47880    ), NOV_CHICK   (P28686    ), 
NOV_COTJA   (P42642    ), NOV_HUMAN   (P48745    ), NOV_MOUSE   (Q64299    ), 
NOV_RAT     (Q9QZQ5    ), NOV_XENLA   (P51609    ), PLSLP_LOTGI (B3A0Q9    ), 
PLS_HALLA   (P82595    ), WISP1_HUMAN (O95388    ), WISP1_MOUSE (O54775    ), 
WISP1_RAT   (Q99PP0    ), WISP2_HUMAN (O76076    ), WISP2_MOUSE (Q9Z0G4    ), 
WISP2_RAT   (Q9JHC6    ), WISP3_HUMAN (O95389    ), WISP3_MOUSE (D3Z5L9    )
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

HTR1B_DANRE (A9JRB3    ), HTRA1_BOVIN (F1N152    ), HTRA1_XENLA (A6YFB5    ), 
HTRA1_XENTR (A4IHA1    ), HTRA3_HUMAN (P83110    ), HTRA3_MOUSE (Q9D236    ), 
HTRA3_RAT   (D3ZA76    ), HTRA4_BOVIN (E1BJW1    ), HTRA4_MOUSE (A2RT60    ), 
HTRA4_RAT   (D3ZKF5    ), IBP6_BOVIN  (Q05718    ), IBP6_HUMAN  (P24592    ), 
IBP6_RAT    (P35572    ), IGFBP_CUPSA (G4V4G1    ), SIBD1_CUPSA (G4V4F9    ), 
SIBD2_CUPSA (G4V4G0    ), VP302_LYCMC (P0CJ14    ), VP59_LYCMC  (P0CJ12    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

IBP2_ONCTS  (P83628    )

		
PDB
[Detailed view]
4 PDB

1WQJ; 2DSP; 2DSQ; 2DSR

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