Entry: PS00222

General information about the entry
Entry name IGFBP_N_1
Accession number PS00222
Entry type PATTERN
Date APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00194
Name and characterization of the entry
DescriptionInsulin-like growth factor-binding protein (IGFBP) N-terminal domain signature.
Pattern [GP]-C-[GSET]-[CE]-[CA]-x(2)-C-[ALP]-x(6)-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 60 hits in 60 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 60 hits in 60 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 15
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 80.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CTGF_BOVIN  (O18739), CTGF_HUMAN  (P29279), CTGF_MOUSE  (P29268), 
CTGF_PIG    (O19113), CTGF_RAT    (Q9R1E9), CYR61_CHICK (P19336), 
CYR61_HUMAN (O00622), CYR61_MOUSE (P18406), CYR61_PANTR (A5A6L1), 
CYR61_RAT   (Q9ES72), IBP1_BOVIN  (P24591), IBP1_HUMAN  (P08833), 
IBP1_MOUSE  (P47876), IBP1_RAT    (P21743), IBP1_SPETR  (Q6Q484), 
IBP2A_DANRE (Q9PTH3), IBP2B_DANRE (B3F211), IBP2_BOVIN  (P13384), 
IBP2_CHICK  (P49705), IBP2_HUMAN  (P18065), IBP2_MOUSE  (P47877), 
IBP2_PIG    (P24853), IBP2_RAT    (P12843), IBP2_SHEEP  (Q29400), 
IBP2_XENLA  (Q5XHC5), IBP2_XENTR  (A4IIA2), IBP3_BOVIN  (P20959), 
IBP3_HUMAN  (P17936), IBP3_MOUSE  (P47878), IBP3_PIG    (P16611), 
IBP3_RAT    (P15473), IBP4_BOVIN  (Q05716), IBP4_HUMAN  (P22692), 
IBP4_MOUSE  (P47879), IBP4_PIG    (P24854), IBP4_RAT    (P21744), 
IBP4_SHEEP  (Q28893), IBP5_BOVIN  (Q05717), IBP5_HUMAN  (P24593), 
IBP5_MOUSE  (Q07079), IBP5_PIG    (Q28985), IBP5_RAT    (P24594), 
IBP5_XENLA  (Q90WV8), IBP6_MOUSE  (P47880), NOV_CHICK   (P28686), 
NOV_COTJA   (P42642), NOV_HUMAN   (P48745), NOV_MOUSE   (Q64299), 
NOV_RAT     (Q9QZQ5), NOV_XENLA   (P51609), PLSLP_LOTGI (B3A0Q9), 
PLS_HALLA   (P82595), WISP1_HUMAN (O95388), WISP1_MOUSE (O54775), 
WISP1_RAT   (Q99PP0), WISP2_HUMAN (O76076), WISP2_MOUSE (Q9Z0G4), 
WISP2_RAT   (Q9JHC6), WISP3_HUMAN (O95389), WISP3_MOUSE (D3Z5L9)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
HTR1B_DANRE (A9JRB3), HTRA1_BOVIN (F1N152), HTRA1_XENLA (A6YFB5), 
HTRA1_XENTR (A4IHA1), HTRA3_HUMAN (P83110), HTRA3_MOUSE (Q9D236), 
HTRA3_RAT   (D3ZA76), HTRA4_BOVIN (E1BJW1), HTRA4_MOUSE (A2RT60), 
HTRA4_RAT   (D3ZKF5), IBP6_BOVIN  (Q05718), IBP6_HUMAN  (P24592), 
IBP6_RAT    (P35572), VP302_LYCMC (P0CJ14), VP59_LYCMC  (P0CJ12)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
IBP2_ONCTS  (P83628)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1WQJ; 2DSP; 2DSQ; 2DSR;

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