Entry: PS00230

General information about the entry
Entry name MAP1B_NEURAXIN
Accession number PS00230
Entry type PATTERN
Date APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00202
Name and characterization of the entry
DescriptionNeuraxin and MAP1B proteins repeated region signature.
Pattern [STAGDN]-Y-x-Y-E-{AV}-{L}-[DE]-[KR]-[STAGCI].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 48 hits in 29 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 22 hits in 3 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 26 hits in 26 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 45.83 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 8
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
MAP1B_HUMAN (P46821), MAP1B_MOUSE (P14873), MAP1B_RAT   (P15205)
False positive hits (sequences which do not belong to the set under consideration):
ADDA_CLOB8  (A6LPC4), ATG2_ASPNC  (A2QSC9), BIOW_METJA  (Q58693), 
BIOW_METSF  (D3S7P2), G6PI_THEMA  (Q9X1A5), GLGB_LACS1  (Q1WSM8), 
HBT1_YEAST  (Q07653), HRD3_SCHPO  (Q9USV0), HSSR_STAA1  (A7X5Y5), 
HSSR_STAA2  (A6U488), HSSR_STAA3  (Q2FED5), HSSR_STAA8  (Q2FVQ9), 
HSSR_STAA9  (A5IVE2), HSSR_STAAB  (Q2YZ24), HSSR_STAAC  (Q5HDJ4), 
HSSR_STAAE  (A6QJK3), HSSR_STAAM  (Q99RR6), HSSR_STAAN  (Q7A3X1), 
HSSR_STAAR  (Q6GE73), HSSR_STAAS  (Q6G6V9), HSSR_STAAT  (A8Z552), 
HSSR_STAAW  (Q7A039), LEU3_STRR6  (Q8DPJ4), NMFIC_NEIMB (Q7DDR9), 
TRPL_CAEEL  (P34586), YPF14_PLAF7 (O96160)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or