Entry: PS00234

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General information about the entry

Entry name [info] GAS_VESICLE_A_1
Accession [info] PS00234
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00207

Name and characterization of the entry

Description [info] Gas vesicles protein GVPa signature 1.
Pattern [info]
[LIVM]-x-[DE]-[LIVMFYT]-[LIVM]-[DE]-x-[LIVM](2)-[DKR](2)-G-x-[LIVMA]-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 45 in 45 different sequences
Number of true positive hits 45 in 45 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.83 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
45 sequences

GVPA1_HALSA (P08958), GVPA1_STRCO (Q9ZC13), GVPA2_HALSA (P08959), 
GVPA2_STRCO (Q9RJB4), GVPA_ANCAQ  (Q9RH31), GVPA_BACME  (O68680), 
GVPA_BRASO  (A4YMQ7), GVPA_DACSA  (Q9R5H8), GVPA_DOLFA  (P10397), 
GVPA_HALMT  (P23761), GVPA_HALVU  (O33397), GVPA_HALWD  (Q18JA1), 
GVPA_KORVE  (Q1INZ5), GVPA_MICAN  (B0JPK6), GVPA_MICBC  (P08412), 
GVPA_MICDP  (P07060), GVPA_MYCSJ  (A3PZ32), GVPA_MYCSK  (A1UFH1), 
GVPA_MYCSS  (Q1B9J2), GVPA_NOSP7  (B2J663), GVPA_NOSS1  (Q8XFU1), 
GVPA_PLAAG  (P0A3G0), GVPA_PLARU  (P0A3G1), GVPA_PSEGP  (P22453), 
GVPA_RHOS1  (A3PPT5), GVPA_RHOS4  (Q3IWB1), GVPA_RHOSK  (B9KU72), 
GVPA_SPICC  (P80997), GVPA_SYNJA  (Q2JW39), GVPA_SYNJB  (Q2JKK1), 
GVPA_THIPN  (P80998), GVPB_BACME  (O68677), GVPJ1_HALSA (P24374), 
GVPJ1_STRCO (Q9ZC08), GVPJ2_HALSA (P33956), GVPJ2_STRCO (Q9RJA9), 
GVPJ_BACME  (O68669), GVPJ_DOLFA  (P55147), GVPJ_HALMT  (Q02235), 
GVPJ_NOSS1  (Q8YUT1), GVPJ_PSEGP  (Q9AKS3), GVPM1_HALSA (P24377), 
GVPM2_HALSI (P33957), GVPM_HALMT  (Q02238), GVPS_BACME  (O68671)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

GVPA_GEOUR  (A5G5E4)

		

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