Entry: PS00234

General information about the entry

Entry name [info] GAS_VESICLE_A_1
Accession [info] PS00234
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00207

Name and characterization of the entry

Description [info] Gas vesicles protein GVPa signature 1.
Pattern [info]
[LIVM]-x-[DE]-[LIVMFYT]-[LIVM]-[DE]-x-[LIVM](2)-[DKR](2)-G-x-[LIVMA]-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 45 in 45 different sequences
Number of true positive hits 45 in 45 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.83 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
45 sequences

GVPA1_HALSA (P08958), GVPA1_STRCO (Q9ZC13), GVPA2_HALSA (P08959), 
GVPA2_STRCO (Q9RJB4), GVPA_ANCAQ  (Q9RH31), GVPA_BACME  (O68680), 
GVPA_BRASO  (A4YMQ7), GVPA_DACSA  (Q9R5H8), GVPA_DOLFA  (P10397), 
GVPA_HALMT  (P23761), GVPA_HALVU  (O33397), GVPA_HALWD  (Q18JA1), 
GVPA_KORVE  (Q1INZ5), GVPA_MICAN  (B0JPK6), GVPA_MICBC  (P08412), 
GVPA_MICDP  (P07060), GVPA_MYCSJ  (A3PZ32), GVPA_MYCSK  (A1UFH1), 
GVPA_MYCSS  (Q1B9J2), GVPA_NOSP7  (B2J663), GVPA_NOSS1  (Q8XFU1), 
GVPA_PLAAG  (P0A3G0), GVPA_PLARU  (P0A3G1), GVPA_PSEGP  (P22453), 
GVPA_RHOS1  (A3PPT5), GVPA_RHOS4  (Q3IWB1), GVPA_RHOSK  (B9KU72), 
GVPA_SPICC  (P80997), GVPA_SYNJA  (Q2JW39), GVPA_SYNJB  (Q2JKK1), 
GVPA_THIPN  (P80998), GVPB_BACME  (O68677), GVPJ1_HALSA (P24374), 
GVPJ1_STRCO (Q9ZC08), GVPJ2_HALSA (P33956), GVPJ2_STRCO (Q9RJA9), 
GVPJ_BACME  (O68669), GVPJ_DOLFA  (P55147), GVPJ_HALMT  (Q02235), 
GVPJ_NOSS1  (Q8YUT1), GVPJ_PSEGP  (Q9AKS3), GVPM1_HALSA (P24377), 
GVPM2_HALSI (P33957), GVPM_HALMT  (Q02238), GVPS_BACME  (O68671)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

GVPA_GEOUR  (A5G5E4)

		

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