Entry: PS00258

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General information about the entry

Entry name [info] CALCITONIN
Accession [info] PS00258
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1992 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00231

Name and characterization of the entry

Description [info] Calcitonin / CGRP / IAPP family signature.
Pattern [info]
C-[SAGDN]-[STN]-x(0,1)-[SA]-T-C-[VMA]-x(3)-[LYF]-x(3)-[LYF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 42 in 42 different sequences
Number of true positive hits 42 in 42 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.50 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
42 sequences

CALC1_ONCKE (P01263), CALC2_ONCGO (P69165), CALC2_ONCKE (P69067), 
CALC2_ONCNE (P69068), CALC3_ONCKI (P01265), CALCA_CANFA (Q9MYV1), 
CALCA_CHICK (P10286), CALCA_HUMAN (P06881), CALCA_MOUSE (Q99JA0), 
CALCA_PIG   (P30880), CALCA_RAT   (P01256), CALCA_SHEEP (P30881), 
CALCB_HORSE (Q9N0T3), CALCB_HUMAN (P10092), CALCB_MOUSE (Q99MP3), 
CALCB_RAT   (P10093), CALCR_PELRI (P31888), CALCR_PHYBI (P81564), 
CALC_ANGJA  (P01262), CALC_BOVIN  (P01260), CALC_CANFA  (P41547), 
CALC_CHICK  (P07660), CALC_HORSE  (Q9N0V5), CALC_HUMAN  (P01258), 
CALC_MOUSE  (P70160), CALC_PIG    (P01259), CALC_RAT    (P01257), 
CALC_SHEEP  (P01261), CRSP1_BOVIN (Q75V95), CRSP1_CANFA (Q75V94), 
CRSP1_CAPHI (B3IWF7), CRSP1_PIG   (Q862B1), CRSP1_SHEEP (B3IWF9), 
IAPP_CANFA  (P17716), IAPP_CAVPO  (P12966), IAPP_CRIGR  (P19890), 
IAPP_FELCA  (P12967), IAPP_HUMAN  (P10997), IAPP_MESAU  (P23442), 
IAPP_MOUSE  (P12968), IAPP_OCTDE  (P22889), IAPP_RAT    (P12969)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

CALC_LITCT  (P0C234), CRSP2_CANFA (Q75V93), CRSP2_CAPHI (B3IWF8), 
CRSP2_PIG   (Q766Y7), CRSP3_PIG   (Q766Y6), IAPP_BOVIN  (Q28207)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

IAPP_PIG    (Q29119), IAPP_RABIT  (Q07334), IAPP_SAGOE  (Q28934), 
IAPP_SHEEP  (Q28605)
» More

PDB
[Detailed view]
11 PDB

1BKU; 1BYV; 1BZB; 2GLG; 2GLH; 2JXZ; 2KB8; 2KJ7; 2L86; 3G7V; 3G7W

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