Entry: PS00258

General information about the entry

Entry name [info] CALCITONIN
Accession [info] PS00258
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1992 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00231

Name and characterization of the entry

Description [info] Calcitonin / CGRP / IAPP family signature.
Pattern [info]
C-[SAGDN]-[STN]-x(0,1)-[SA]-T-C-[VMA]-x(3)-[LYF]-x(3)-[LYF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 42 in 42 different sequences
Number of true positive hits 42 in 42 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.50 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
42 sequences

CALC1_ONCKE (P01263), CALC2_ONCGO (P69165), CALC2_ONCKE (P69067), 
CALC2_ONCNE (P69068), CALC3_ONCKI (P01265), CALCA_CANFA (Q9MYV1), 
CALCA_CHICK (P10286), CALCA_HUMAN (P06881), CALCA_MOUSE (Q99JA0), 
CALCA_PIG   (P30880), CALCA_RAT   (P01256), CALCA_SHEEP (P30881), 
CALCB_HORSE (Q9N0T3), CALCB_HUMAN (P10092), CALCB_MOUSE (Q99MP3), 
CALCB_RAT   (P10093), CALCR_PELRI (P31888), CALCR_PHYBI (P81564), 
CALC_ANGJA  (P01262), CALC_BOVIN  (P01260), CALC_CANFA  (P41547), 
CALC_CHICK  (P07660), CALC_HORSE  (Q9N0V5), CALC_HUMAN  (P01258), 
CALC_MOUSE  (P70160), CALC_PIG    (P01259), CALC_RAT    (P01257), 
CALC_SHEEP  (P01261), CRSP1_BOVIN (Q75V95), CRSP1_CANFA (Q75V94), 
CRSP1_CAPHI (B3IWF7), CRSP1_PIG   (Q862B1), CRSP1_SHEEP (B3IWF9), 
IAPP_CANFA  (P17716), IAPP_CAVPO  (P12966), IAPP_CRIGR  (P19890), 
IAPP_FELCA  (P12967), IAPP_HUMAN  (P10997), IAPP_MESAU  (P23442), 
IAPP_MOUSE  (P12968), IAPP_OCTDE  (P22889), IAPP_RAT    (P12969)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

CALC_LITCT  (P0C234), CRSP2_CANFA (Q75V93), CRSP2_CAPHI (B3IWF8), 
CRSP2_PIG   (Q766Y7), CRSP3_PIG   (Q766Y6), IAPP_BOVIN  (Q28207)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

IAPP_PIG    (Q29119), IAPP_RABIT  (Q07334), IAPP_SAGOE  (Q28934), 
IAPP_SHEEP  (Q28605)
» More

PDB
[Detailed view]
11 PDB

1BKU; 1BYV; 1BZB; 2GLG; 2GLH; 2JXZ; 2KB8; 2KJ7; 2L86; 3G7V; 3G7W

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