Entry: PS00271

General information about the entry

Entry name [info] THIONIN
Accession [info] PS00271
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 15-MAR-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00244

Name and characterization of the entry

Description [info] Plant thionins signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_03 which contains 553'941 sequence entries.

Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.43 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 2
Site [info] disulfide at position 8
Version [info] 1

Cross-references [info]

True positive sequences
27 sequences

CRAM_CRAAB  (P01542    ), THN1_VISAL  (P01537    ), THN1_WHEAT  (P01544    ), 
THN21_ARATH (Q42596    ), THN22_ARATH (Q42597    ), THN23_ARATH (Q8VZK8    ), 
THN24_ARATH (Q9C8D6    ), THN2_VISAL  (P32880    ), THN2_WHEAT  (P32032    ), 
THN3_HORVU  (P08772    ), THN3_VISAL  (P01538    ), THN5_HORVU  (P09617    ), 
THN6_HORVU  (P09618    ), THN7_HORVU  (Q42838    ), THNA_HORVU  (P01545    ), 
THNA_PHOLI  (P01540    ), THNB_HORVU  (P21742    ), THNB_PHOLI  (P59358    ), 
THNB_VISAL  (P08943    ), THNB_WHEAT  (P01543    ), THNC_VISAL  (P83554    ), 
THND_HELPU  (P60057    ), THNX_HORVU  (Q8H0Q5    ), THN_BRARP   (Q9SBK8    ), 
THN_DENCL   (P01541    ), THN_PHOLT   (P01539    ), THN_PYRPU   (P07504    )
» more

False negative sequences
1 sequence

THN5_WHEAT  (Q05806    )

[Detailed view]
36 PDB

1AB1; 1BHP; 1CBN; 1CCM; 1CCN; 1CNR; 1CRN; 1CXR; 1ED0; 1EJG; 1JMN; 1JMP; 1JXT; 1JXU; 1JXW; 1JXX; 1JXY; 1NBL; 1OKH; 1ORL; 1WUW; 1YV8; 1YVA; 2EYA; 2EYB; 2EYC; 2EYD; 2FD7; 2FD9; 2PLH; 2V9B; 3C8P; 3NIR; 3SZS; 3U7T; 4FC1
» more

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