Entry: PS00271

General information about the entry

Entry name [info] THIONIN
Accession [info] PS00271
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00244

Name and characterization of the entry

Description [info] Plant thionins signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.43 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 2
Site [info] disulfide at position 8
Version [info] 1

Cross-references [info]

True positive sequences
27 sequences

CRAM_CRAAB  (P01542), THN1_VISAL  (P01537), THN1_WHEAT  (P01544), 
THN21_ARATH (Q42596), THN22_ARATH (Q42597), THN23_ARATH (Q8VZK8), 
THN24_ARATH (Q9C8D6), THN2_VISAL  (P32880), THN2_WHEAT  (P32032), 
THN3_HORVU  (P08772), THN3_VISAL  (P01538), THN5_HORVU  (P09617), 
THN6_HORVU  (P09618), THN7_HORVU  (Q42838), THNA_HORVU  (P01545), 
THNA_PHOLI  (P01540), THNB_HORVU  (P21742), THNB_PHOLI  (P59358), 
THNB_VISAL  (P08943), THNB_WHEAT  (P01543), THNC_VISAL  (P83554), 
THN_DENCL   (P01541), THN_PHOTO   (P01539), THN_PYRPU   (P07504)
» more

False negative sequences
1 sequence

THN5_WHEAT  (Q05806)

[Detailed view]
36 PDB

1AB1; 1BHP; 1CBN; 1CCM; 1CCN; 1CNR; 1CRN; 1CXR; 1ED0; 1EJG; 1JMN; 1JMP; 1JXT; 1JXU; 1JXW; 1JXX; 1JXY; 1NBL; 1OKH; 1ORL; 1WUW; 1YV8; 1YVA; 2EYA; 2EYB; 2EYC; 2EYD; 2FD7; 2FD9; 2PLH; 2V9B; 3C8P; 3NIR; 3SZS; 3U7T; 4FC1
» more

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