PROSITE entry PS00276
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General information about the entry
Entry name [info] | CHANNEL_COLICIN |
Accession [info] | PS00276 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00249 |
Name and characterization of the entry
Description [info] | Channel forming colicins signature. |
Pattern [info] |
T-x(2)-W-x-P-[LIVMFY](3)-x(2)-E. |
Numerical results [info]
Total number of hits | 17 in 17 different sequences |
Number of true positive hits | 11 in 11 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 6 in 6 different sequences |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 64.71 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
11 sequences
CE05_ECOLX (Q47500), CE10_ECOLX (Q47125), CEA1_ECOLX (P02978), CEA1_SHISO (P21178), CEAB_ECOLX (P05819), CEAK_ECOLX (Q47502), CEAN_ECOLX (P08083), CEA_CITFR (P04480), CEA_ECOLX (Q47108), CEIA_ECOLX (P06716), CEIB_ECOLX (P04479)» more
|
UniProtKB/Swiss-Prot False positive sequences |
6 sequences
DSC1_SCHPO (O43085), PK1L2_HUMAN (Q7Z442), PK1L2_MOUSE (Q7TN88), SRE31_CAEEL (O62266), SRE32_CAEEL (P90837), SSIT_STRMB (P83544)» more |
PDB [Detailed view] |
5 PDB
1A87; 1CII; 1COL; 1RH1; 2I88 |