Entry: PS00276

General information about the entry

Entry name [info] CHANNEL_COLICIN
Accession [info] PS00276
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00249

Name and characterization of the entry

Description [info] Channel forming colicins signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 16 in 16 different sequences
Number of true positive hits 11 in 11 different sequences
Number of 'unknown' hits
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 68.75 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
11 sequences

CE05_ECOLX  (Q47500), CE10_ECOLX  (Q47125), CEA1_ECOLX  (P02978), 
CEA1_SHISO  (P21178), CEAB_ECOLX  (P05819), CEAK_ECOLX  (Q47502), 
CEAN_ECOLX  (P08083), CEA_CITFR   (P04480), CEA_ECOLX   (Q47108), 
CEIA_ECOLX  (P06716), CEIB_ECOLX  (P04479)
» More

False positive sequences
5 sequences

DSC1_SCHPO  (O43085), PK1L2_HUMAN (Q7Z442), PK1L2_MOUSE (Q7TN88), 
SRE31_CAEEL (O62266), SRE32_CAEEL (P90837)
» More

[Detailed view]

1A87; 1CII; 1COL; 1RH1; 2I88

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission