Entry: PS00276

General information about the entry

Entry name [info] CHANNEL_COLICIN
Accession [info] PS00276
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 15-FEB-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00249

Name and characterization of the entry

Description [info] Channel forming colicins signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_02 which contains 553'655 sequence entries.

Total number of hits 16 in 16 different sequences
Number of true positive hits 11 in 11 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 68.75 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
11 sequences

CE05_ECOLX  (Q47500    ), CE10_ECOLX  (Q47125    ), CEA1_ECOLX  (P02978    ), 
CEA1_SHISO  (P21178    ), CEAB_ECOLX  (P05819    ), CEAK_ECOLX  (Q47502    ), 
CEAN_ECOLX  (P08083    ), CEA_CITFR   (P04480    ), CEA_ECOLX   (Q47108    ), 
CEIA_ECOLX  (P06716    ), CEIB_ECOLX  (P04479    )
» more

False positive sequences
5 sequences

DSC1_SCHPO  (O43085    ), PK1L2_HUMAN (Q7Z442    ), PK1L2_MOUSE (Q7TN88    ), 
SRE31_CAEEL (O62266    ), SRE32_CAEEL (P90837    )
» more

[Detailed view]

1A87; 1CII; 1COL; 1RH1; 2I88

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