Entry: PS00285

General information about the entry
Entry name POTATO_INHIBITOR
Accession number PS00285
Entry type PATTERN
Date APR-1990 (CREATED); JUN-1992 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00257
Name and characterization of the entry
DescriptionPotato inhibitor I family signature.
Pattern [FYW]-P-[EQH]-[LIV](2)-G-x(2)-[STAGV]-x(2)-A.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 25 hits in 25 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 24 hits in 24 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 96.00 %
  • Recall (true hits / (true hits + false negatives)): 92.31 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ATSI_AMACA  (P80211), BGIA_MOMCH  (P24076), HPI_HEVBR   (Q6XNP7), 
ICI1_CANLI  (P81712), ICI1_PHAAN  (P16064), ICI1_SOLLC  (P05118), 
ICI1_SOLPE  (P16231), ICI1_SOLTU  (Q00783), ICI2_HORVU  (P01053), 
ICIA_HORVU  (P16062), ICIA_SOLTU  (P01052), ICIB_HORVU  (P16063), 
ICIC_HIRME  (P01051), ICIC_HORVU  (P01054), ICID_SOLTU  (P08454), 
ICIS_VICFA  (P08820), ICIW_WHEAT  (P82977), ICI_LINUS   (P82381), 
IER1_SOLLC  (P20076), IPIA_TOBAC  (Q03198), IPIB_TOBAC  (Q03199), 
ITH5_CUCMA  (P19873), ITI_FAGTA   (P86971), ITR1_NICSY  (Q02214)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ICI3_HORVU  (P08626), ICI_LUMTE   (P83472)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
ICI_EISHO   (P83830)
False positive hits (sequences which do not belong to the set under consideration):
GPMI_PELCD  (Q3A1E5)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1ACB; 1CIQ; 1CIR; 1CIS; 1COA; 1CQ4; 1CSE; 1DWM; 1EGL; 1EGP; 1HYM; 1LW6; 1MEE; 1MIT; 1SBN; 1SIB; 1TEC; 1TIN; 1YPA; 1YPB; 1YPC; 2CI2; 2SEC; 2SNI; 2TEC; 3CI2; 3TEC; 4B1T; 4B2A; 4B2B; 4B2C; 4H4F;

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