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Entry: PS00289

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General information about the entry

Entry name [info] PENTAXIN
Accession [info] PS00289
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1997 (DATA UPDATE); DEC-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00261

Name and characterization of the entry

Description [info] Pentaxin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_01 which contains 547'357 sequence entries.

Total number of hits 34 in 34 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 8
Number of 'partial' sequences 10
Precision (true positives / (true positives + false positives)) 94.12 %
Recall (true positives / (true positives + false negatives)) 80.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 3
Version [info] 1

Cross-references [info]

True positive sequences
32 sequences

CRP1_LIMPO  (P06205), CRP3_LIMPO  (P06207), CRP4_LIMPO  (P06206), 
CRP_CAVPO   (P49254), CRP_HUMAN   (P02741), CRP_MESAU   (P49262), 
CRP_MOUSE   (P14847), CRP_PIG     (O19062), CRP_RABIT   (P02742), 
CRP_RAT     (P48199), CRP_XENLA   (Q07203), FP_CRIMI    (P15697), 
MPTX_BOVIN  (Q3T166), NPTX1_HUMAN (Q15818), NPTX1_MOUSE (Q62443), 
NPTX1_RAT   (P47971), NPTX2_CAVPO (P47970), NPTX2_HUMAN (P47972), 
NPTX2_MOUSE (O70340), NPTX2_RAT   (P97738), NPTXR_MOUSE (Q99J85), 
PTX3_BOVIN  (Q0VCG9), PTX3_HUMAN  (P26022), PTX3_MOUSE  (P48759), 
PXN1_XENLA  (P49263), SAMP_BOVIN  (Q3T004), SAMP_CAVPO  (P49255), 
SAMP_HUMAN  (P02743), SAMP_MESAU  (P07629), SAMP_MOUSE  (P12246), 
SAMP_PIG    (O19063), SAMP_RAT    (P23680)
» More

False negative sequences
8 sequences

MPTX_HUMAN  (A8MV57), NPTXR_HUMAN (O95502), NPTXR_RAT   (O35764), 
» More

'Partial' sequences
10 sequences

CRP1_GADMO  (P86688), CRP2_GADMO  (P86689), CRP_MUSCA   (P19094), 
CRP_PLEPL   (P12245), LIMU_LIMPO  (P02744), SAMP_ANALU  (P86694), 
SAMP_HIPHI  (P86695), SAMP_MUSCA  (P19095), SAMP_PLEPL  (P20677), 
SAMP_SALSA  (P86693)
» More

False positive sequences
2 sequences


[Detailed view]
19 PDB

1B09; 1GNH; 1GYK; 1LGN; 1LJ7; 1SAC; 2A3W; 2A3X; 2A3Y; 2W08; 3D5O; 3KQR; 3L2Y; 3PVN; 3PVO; 4AVS; 4AVT; 4AVV; 4AYU
» More

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