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PROSITE entry PS00306
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General information about the entry
| Entry name [info] | CASEIN_ALPHA_BETA |
| Accession [info] | PS00306 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1990 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00277 |
Name and characterization of the entry
| Description [info] | Caseins alpha/beta signature. |
| Pattern [info] |
C-L-[LV]-A-x-A-[LVF]-A. |
Numerical results [info]
| Total number of hits | 40 in 40 different sequences |
| Number of true positive hits | 32 in 32 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 8 in 8 different sequences |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 80.00 % |
| Recall (true positives / (true positives + false negatives)) | 82.05 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
32 sequences
CASA1_BOVIN (P02662), CASA1_BUBBU (O62823), CASA1_CAMDR (O97943), CASA1_CAPHI (P18626), CASA1_CAVPO (P04656), CASA1_HUMAN (P47710), CASA1_MOUSE (P19228), CASA1_RABIT (P09115), CASA1_RAT (P02661), CASA1_SHEEP (P04653), CASA2_BOVIN (P02663), CASA2_CAPHI (P33049), CASA2_CAVPO (P04655), CASA2_EQUAS (B7VGF9), CASA2_PIG (P39036), CASA2_RABIT (P50419), CASA2_SHEEP (P04654), CASB_BOVIN (P02666), CASB_BUBBU (Q9TSI0), CASB_HORSE (Q9GKK3), CASB_HUMAN (P05814), CASB_MOUSE (P10598), CASB_RABIT (P09116), CASB_RAT(P02665), CASB_SHEEP (P11839), CS2LA_RABIT (P50418), CS2LA_RAT (P02667), CS2LB_MOUSE (P02664), CS2LB_RAT (Q8CGR3), SERA_MACFA (Q60HD7), SERA_PANTR (A5A6P1), SERA_PONAB (Q5R7M2)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
CASA1_NOTEU (P28549), CASA1_PIG (P39035), CASA2_CAMDR (O97944), CASB_CAMDR (Q9TVD0), CASB_CAPHI (P33048), CASB_NOTEU (P28550), CASB_PIG(P39037)» more |
| UniProtKB/Swiss-Prot False positive sequences |
8 sequences
FAAH1_PIG (Q9TUI8), FLUC1_THEFY (Q47KG0), LCP2A_DROME (Q7JZV0), MMLH_CUPPJ (O51798), SERA_HUMAN (O43175), SERPH_BOVIN (Q2KJH6), SERPH_MOUSE (P19324), SERPH_RAT (P29457)» more |