Entry: PS00310

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General information about the entry

Entry name [info] LAMP_1
Accession [info] PS00310
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00280

Name and characterization of the entry

Description [info] Lysosome-associated membrane glycoproteins duplicated domain signature.
Pattern [info]
[STA]-C-[LIVM]-[LIVMFYW]-A-x-[LIVMFYW]-x(3)-[LIVMFYW]-x(3)-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 28 in 23 different sequences
Number of true positive hits 23 in 18 different sequences
Number of 'unknown' hits
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 82.14 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] disulfide at position 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
18 sequences

LAMP1_BOVIN (Q05204), LAMP1_CHICK (P05300), LAMP1_CRIGR (P49129), 
LAMP1_HUMAN (P11279), LAMP1_MOUSE (P11438), LAMP1_RAT   (P14562), 
LAMP2_CHICK (Q90617), LAMP2_CRIGR (P49130), LAMP2_HUMAN (P13473), 
LAMP2_MOUSE (P17047), LAMP2_RAT   (P17046), LAMP5_BOVIN (A4FV27), 
LAMP5_DANRE (A8WFR0), LAMP5_HUMAN (Q9UJQ1), LAMP5_MOUSE (Q9D387), 
LAMP5_PONAB (Q5R5V2), LAMP5_RAT   (Q5PPI4), LAMP5_XENTR (A4IGL3)
» More

UniProtKB/Swiss-Prot
False positive sequences
5 sequences

FTSW_IDILO  (Q5R0M2), MTMRA_MOUSE (Q7TPM9), MTRAA_XENLA (Q5U581), 
MTRAB_XENLA (Q6NU08), SCP43_ARATH (Q84W27)
» More


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