Due to scheduled maintenance work, this service may not be available on Monday January 22nd between 08.00 am and 9.00 am CEST.
To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS00310

General information about the entry

Entry name [info] LAMP_1
Accession [info] PS00310
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 20-DEC-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00280

Name and characterization of the entry

Description [info] Lysosome-associated membrane glycoproteins duplicated domain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_12 which contains 556'388 sequence entries.

Total number of hits 28 in 23 different sequences
Number of true positive hits 23 in 18 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 82.14 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] disulfide at position 2
Version [info] 1

Cross-references [info]

True positive sequences
18 sequences

LAMP1_BOVIN (Q05204    ), LAMP1_CHICK (P05300    ), LAMP1_CRIGR (P49129    ), 
LAMP1_HUMAN (P11279    ), LAMP1_MOUSE (P11438    ), LAMP1_RAT   (P14562    ), 
LAMP2_CHICK (Q90617    ), LAMP2_CRIGR (P49130    ), LAMP2_HUMAN (P13473    ), 
LAMP2_MOUSE (P17047    ), LAMP2_RAT   (P17046    ), LAMP5_BOVIN (A4FV27    ), 
LAMP5_DANRE (A8WFR0    ), LAMP5_HUMAN (Q9UJQ1    ), LAMP5_MOUSE (Q9D387    ), 
LAMP5_PONAB (Q5R5V2    ), LAMP5_RAT   (Q5PPI4    ), LAMP5_XENTR (A4IGL3    )
» more

False positive sequences
5 sequences

FTSW_IDILO  (Q5R0M2    ), MTMRA_MOUSE (Q7TPM9    ), MTRAA_XENLA (Q5U581    ), 
MTRAB_XENLA (Q6NU08    ), SCP43_ARATH (Q84W27    )
» more

[Detailed view]

5GV0; 5GV3

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission