Entry: PS00335

General information about the entry
Entry name PARATHYROID
Accession number PS00335
Entry type PATTERN
Date APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00296
Name and characterization of the entry
DescriptionParathyroid hormone family signature.
Pattern V-S-E-x-Q-x(2)-H-x(2)-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 21 hits in 21 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 17 hits in 17 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 4 hits in 4 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 80.95 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
PTHR_BOVIN  (P58073), PTHR_CANFA  (P52211), PTHR_CHICK  (P17251), 
PTHR_HUMAN  (P12272), PTHR_MOUSE  (P22858), PTHR_RABIT  (Q9GLC7), 
PTHR_RAT    (P13085), PTHR_SHEEP  (Q9GK30), PTHY_BOVIN  (P01268), 
PTHY_CANFA  (P52212), PTHY_CHICK  (P15743), PTHY_FELCA  (Q9GL67), 
PTHY_HORSE  (Q27IM2), PTHY_HUMAN  (P01270), PTHY_MACFA  (Q9XT35), 
PTHY_PIG    (P01269), PTHY_RAT    (P04089)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PTHR_HORSE  (Q9GMB7)
False positive hits (sequences which do not belong to the set under consideration):
AKT6_ARATH  (Q8GXE6), B3GT4_HUMAN (O96024), SAR1_CRYNB  (P0CR31), 
SAR1_CRYNJ  (P0CR30)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1BWX; 1BZG; 1ET1; 1ET2; 1ET3; 1FVY; 1HPH; 1HPY; 1HTH; 1ZWA; 1ZWB; 1ZWC; 2L1X;

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