Entry: PS00363

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General information about the entry

Entry name [info] BACTERIAL_PQQ_1
Accession [info] PS00363
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00375

Name and characterization of the entry

Description [info] Bacterial quinoprotein dehydrogenases signature 1.
Pattern [info]
[DEN]-[WV]-x(3)-G-[RKNM]-x(6)-[FYW]-[SV]-x(4)-[LIVM]-N-x(2)-N-V-x(2)-L-
[RKT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 65.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
13 sequences

DHET_ACEAC  (P18278), DHET_GLUOX  (O05542), DHET_GLUPO  (P28036), 
DHET_KOMEU  (Q44002), DHGA_ACICA  (P05465), DHG_ECOLI   (P15877), 
DHG_GLUOX   (P27175), DHM1_METEA  (P16027), DHM1_METOR  (P15279), 
DHM1_PARDE  (P12293), EXAA_PSEAE  (Q9Z4J7), QEDH_PSEPU  (A8R3S4), 
QUIA_ACIAD  (Q59086)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

DHM1_METME  (P38539), PVADH_PSESP (P77931), QGDA_PSEPU  (Q4W6G0), 
QHED_PSEPU  (Q8GR64), QUIA_XANCJ  (Q9XD78), SLDA_GLUOX  (Q70JN9), 
SLDA_GLUTH  (Q8KIL1)
» More

PDB
[Detailed view]
5 PDB

1FLG; 1H4I; 1H4J; 1LRW; 1W6S

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