Entry: PS00363

General information about the entry

Entry name [info] BACTERIAL_PQQ_1
Accession [info] PS00363
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00375

Name and characterization of the entry

Description [info] Bacterial quinoprotein dehydrogenases signature 1.
Pattern [info]
[DEN]-[WV]-x(3)-G-[RKNM]-x(6)-[FYW]-[SV]-x(4)-[LIVM]-N-x(2)-N-V-x(2)-L-
[RKT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 65.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
13 sequences

DHET_ACEAC  (P18278), DHET_GLUOX  (O05542), DHET_GLUPO  (P28036), 
DHET_KOMEU  (Q44002), DHGA_ACICA  (P05465), DHG_ECOLI   (P15877), 
DHG_GLUOX   (P27175), DHM1_METEA  (P16027), DHM1_METOR  (P15279), 
DHM1_PARDE  (P12293), EXAA_PSEAE  (Q9Z4J7), QEDH_PSEPU  (A8R3S4), 
QUIA_ACIAD  (Q59086)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

DHM1_METME  (P38539), PVADH_PSESP (P77931), QGDA_PSEPU  (Q4W6G0), 
QHED_PSEPU  (Q8GR64), QUIA_XANCJ  (Q9XD78), SLDA_GLUOX  (Q70JN9), 
SLDA_GLUTH  (Q8KIL1)
» More

PDB
[Detailed view]
5 PDB

1FLG; 1H4I; 1H4J; 1LRW; 1W6S

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