Entry: PS00372

General information about the entry
Entry name PTS_EIIA_TYPE_2_HIS
Accession number PS00372
Entry type PATTERN
Date NOV-1990 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00528
Name and characterization of the entry
DescriptionPTS EIIA domains phosphorylation site signature 2.
Pattern [DENQ]-x(6)-[LIVMF]-[GA]-x(2)-[LIVM]-A-[LIVM]-P-H-[GAC].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 51 hits in 51 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 50 hits in 50 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 98.04 %
  • Recall (true hits / (true hits + false negatives)): 90.91 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 10,phosphorylation
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
HRSA_ECOLI  (P54745), MANR_BACSU  (O31644), PTF3A_BACSU (P71012), 
PTFAH_ECO57 (P69812), PTFAH_ECOLI (P69811), PTFAH_HAEIN (P44715), 
PTFAH_SALTI (Q8Z591), PTFAH_SALTY (P17127), PTFAX_RHOCA (P23388), 
PTFAX_XANCP (P45597), PTFA_ECOLI  (P32155), PTM3C_BUCAI (P57635), 
PTM3C_BUCAP (Q8K911), PTM3C_BUCBP (Q89A36), PTM3C_ECOLI (P00550), 
PTM3C_KLEPN (Q9XBM7), PTM3C_PASMU (Q9CLY8), PTM3C_VIBCH (Q9KKQ7), 
PTMA_BACHD  (Q9K680), PTMA_BACSU  (C0H3V2), PTMA_ECO57  (P69825), 
PTMA_ECOLI  (P69824), PTMA_ENTFA  (P27547), PTMA_GEOSE  (Q45420), 
PTMA_STAAC  (Q5HE46), PTMA_STAAM  (P0A0D7), PTMA_STAAN  (P0A0D8), 
PTMA_STAAR  (Q6GER9), PTMA_STAAS  (Q6G7F4), PTMA_STAAW  (P0A0D9), 
PTMA_STACT  (P17876), PTMA_STRMU  (Q02420), PTN3B_BACSU (O31645), 
PTSN_BRAJA  (P30335), PTSN_ECOLI  (P69829), PTSN_KLEOX  (P17162), 
PTSN_PSEAE  (Q9HVV4), PTSN_PSEPU  (P33670), PTSN_SHIFL  (P69815), 
SGCA_ECOLI  (P39363), ULAC_ECO57  (P69821), ULAC_ECOL6  (Q8FAJ0), 
ULAC_ECOLI  (P69820), ULAC_MYCPN  (P75292), ULAC_SALCH  (Q57GJ7), 
ULAC_SALPA  (Q5PJ64), ULAC_SALTY  (Q8ZK88), ULAC_SHIBS  (Q31TC6), 
ULAC_SHIFL  (Q83P28), ULAC_SHISS  (Q3YUF3)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
MTLR_BACSU  (P96574), PTMA_MYCPN  (P75145), PTSN_HAEIN  (P45072), 
ULAC_SALTI  (Q8Z170), ULAC_SHIDS  (Q328K2)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PTMA_STAAU  (P0A0E0)
False positive hits (sequences which do not belong to the set under consideration):
LAMC1_DROME (P15215)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1A3A; 1A6J; 1J6T; 2OQ3;

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