Entry: PS00418

General information about the entry

Entry name [info] POTEX_CARLAVIRUS_COAT
Accession [info] PS00418
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00346

Name and characterization of the entry

Description [info] Potexviruses and carlaviruses coat protein signature.
Pattern [info]
[RK]-[FYW]-A-[GAP]-F-D-x-F-x(2)-[LV]-x(3)-[GASTY]-[GASTV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

CAPSD_ASPVP (Q64966), CAPSD_BOTVX (Q6YNQ5), CAPSD_CLBVS (Q91QZ1), 
CAPSD_CMVSI (Q00467), CAPSD_CYMV  (P16486), CAPSD_FXMV  (P22172), 
CAPSD_ICRSV (Q9QEE7), CAPSD_LVX   (P27334), CAPSD_NMV   (P15100), 
CAPSD_P1AMV (Q07506), CAPSD_PAMV  (P37993), CAPSD_PMV   (P16596), 
CAPSD_PVX   (P07699), CAPSD_PVXCP (P62406), CAPSD_PVXHB (Q07626), 
CAPSD_PVXU3 (P31798), CAPSD_PVXX3 (P17782), CAPSD_PVXXC (P10468), 
CAPSD_SHVX  (Q04572), CAPSD_SMYEA (P28899), CAPSD_WCMVM (P09502), 
CAPSD_WCMVO (P15406), COAT_CVB    (P37991), COAT_HELVS  (Q00556), 
COAT_LSV    (P27335), COAT_POPMV  (Q02106), COAT_PVMG   (Q01669), 
COAT_PVMR   (P17529), COAT_PVSP   (P16653)
» More

PDB
[Detailed view]
1 PDB

4DOX

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