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PROSITE entry PS00418


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General information about the entry

Entry name [info] POTEX_CARLAVIRUS_COAT
Accession [info] PS00418
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE;
24-JAN-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00346

Name and characterization of the entry

Description [info] Potexviruses and carlaviruses coat protein signature.
Pattern [info]
[RK]-[FYW]-A-[GAP]-F-D-x-F-x(2)-[LV]-x(3)-[GASTY]-[GASTV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_01 which contains 570'830 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

CAPSD_ASPVP (Q64966), CAPSD_BOTVX (Q6YNQ5), CAPSD_CLBVS (Q91QZ1), 
CAPSD_CMVSI (Q00467), CAPSD_CVB   (P37991), CAPSD_CYMV  (P16486), 
CAPSD_FXMV  (P22172), CAPSD_HELVS (Q00556), CAPSD_ICRSV (Q9QEE7), 
CAPSD_LSV   (P27335), CAPSD_LVX   (P27334), CAPSD_NMV   (P15100), 
CAPSD_P1AMV (Q07506), CAPSD_PAMV  (P37993), CAPSD_PMV   (P16596), 
CAPSD_POPMV (Q02106), CAPSD_PVMG  (Q01669), CAPSD_PVMR  (P17529), 
CAPSD_PVSP  (P16653), CAPSD_PVX   (P07699), CAPSD_PVXCP (P62406), 
CAPSD_PVXHB (Q07626), CAPSD_PVXU3 (P31798), CAPSD_PVXX3 (P17782), 
CAPSD_PVXXC (P10468), CAPSD_SHVX  (Q04572), CAPSD_SMYEA (P28899), 
CAPSD_WCMVM (P09502), CAPSD_WCMVO (P15406)
» more

PDB
[Detailed view]
2 PDB

4DOX; 6R7G