Entry: PS00418

Forthcoming changes to the profile format
General information about the entry

Entry name [info] POTEX_CARLAVIRUS_COAT
Accession [info] PS00418
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00346

Name and characterization of the entry

Description [info] Potexviruses and carlaviruses coat protein signature.
Pattern [info]
[RK]-[FYW]-A-[GAP]-F-D-x-F-x(2)-[LV]-x(3)-[GASTY]-[GASTV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

CAPSD_ASPVP (Q64966), CAPSD_BOTVX (Q6YNQ5), CAPSD_CLBVS (Q91QZ1), 
CAPSD_CMVSI (Q00467), CAPSD_CYMV  (P16486), CAPSD_FXMV  (P22172), 
CAPSD_ICRSV (Q9QEE7), CAPSD_LVX   (P27334), CAPSD_NMV   (P15100), 
CAPSD_P1AMV (Q07506), CAPSD_PAMV  (P37993), CAPSD_PMV   (P16596), 
CAPSD_PVX   (P07699), CAPSD_PVXCP (P62406), CAPSD_PVXHB (Q07626), 
CAPSD_PVXU3 (P31798), CAPSD_PVXX3 (P17782), CAPSD_PVXXC (P10468), 
CAPSD_SHVX  (Q04572), CAPSD_SMYEA (P28899), CAPSD_WCMVM (P09502), 
CAPSD_WCMVO (P15406), COAT_CVB    (P37991), COAT_HELVS  (Q00556), 
COAT_LSV    (P27335), COAT_POPMV  (Q02106), COAT_PVMG   (Q01669), 
COAT_PVMR   (P17529), COAT_PVSP   (P16653)
» More

PDB
[Detailed view]
1 PDB

4DOX

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission