| General information about the entry |
| Entry name |
SMALL_HYDR_PLANT_SEED |
| Accession number |
PS00431 |
| Entry type |
PATTERN |
| Date |
NOV-1990 (CREATED); JUN-1994 (DATA UPDATE); MAR-2013 (INFO UPDATE).
|
| PROSITE Documentation |
PDOC00355 |
| Name and characterization of the entry |
| Description | Small hydrophilic plant seed proteins signature.
|
| Pattern |
G-[EQ]-T-V-V-P-G-G-T.
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
- Total number of hits in UniProtKB/Swiss-Prot: 17 hits in 17 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 17 hits in 17 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
- Number of known missed hits: 0
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
- Precision (true hits / (true hits + false positives)): 100.00 %
- Recall (true hits / (true hits + false negatives)): 100.00 %
|
| Comments |
- Taxonomic range: Eukaryotes
- Maximum known number of repetitions of the pattern in a single protein: 1
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot |
True positive hits:EM1_ARATH (Q07187), EM1_WHEAT (P04568), EM2_WHEAT (P22701),
EM3_WHEAT (Q08000), EM4_WHEAT (P42755), EM6_ARATH (Q02973),
EMB1_DAUCA (P17639), EMB5_MAIZE (P46517), EML_PICGL (Q40864),
EMP1_ORYSJ (P46520), LE10_HELAN (P46514), LE193_HORVU (Q02400),
LE194_HORVU (Q05191), LE19A_HORVU (Q05190), LE19B_HORVU (P46532),
LE19_GOSHI (P09443), SEEP_RAPSA (P11573) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits)
, you can enter a file name. These entries
will then be saved to a file under this name.
(Please note that this temporary file will only be kept for 1 week.)