PROSITE entry PS00434
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General information about the entry
| Entry name [info] | HSF_DOMAIN |
| Accession [info] | PS00434 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAY-1991 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00381 |
Name and characterization of the entry
| Description [info] | HSF-type DNA-binding domain signature. |
| Pattern [info] |
L-x(3)-[FY]-K-H-x-N-x-[STAN]-S-F-[LIVM]-R-Q-L-[NH]-x-Y-x-[FYW]-[RKH]-K- [LIVM]. |
Numerical results [info]
| Total number of hits | 76 in 76 different sequences |
| Number of true positive hits | 76 in 76 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.36 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
76 sequences
HFA1A_ARATH (P41151), HFA1B_ARATH (O81821), HFA1D_ARATH (Q9LQM7), HFA1E_ARATH (Q9SCW5), HFA2A_ORYSJ (Q84MN7), HFA2B_ORYSJ (Q6VBB2), HFA2C_ORYSJ (Q338B0), HFA2D_ORYSJ (Q8H7Y6), HFA2E_ORYSJ (Q6F388), HFA4B_ORYSJ (Q94J16), HFA4C_ARATH (Q9FK72), HFA4D_ORYSJ (Q93VB5), HFA6A_ARATH (Q1PDN3), HFA6A_ORYSJ (Q5Z6A4), HFA6B_ARATH (Q9LUH8), HFA6B_ORYSJ (Q657C0), HFA7A_ARATH (Q9SV12), HFA7B_ARATH (Q9M1V5), HFB2A_ARATH (Q9SCW4), HFB2A_ORYSJ (Q7XRX3), HFB2B_ARATH (Q9T0D3), HFB2B_ORYSJ (Q6Z9C8), HFB2C_ORYSJ (Q652B0), HFB4A_ORYSJ (Q6Z9R8), HFB4B_ORYSJ (Q7XHZ0), HFB4C_ORYSJ (Q67U94), HFB4D_ORYSJ (Q10KX8), HFC1A_ORYSJ (Q6VBA4), HFC1B_ORYSJ (Q942D6), HFC2A_ORYSJ (Q6EUG4), HFC2B_ORYSJ (Q0DBL6), HSF1_BOVIN (Q08DJ8), HSF1_CHICK (P38529), HSF1_HUMAN (Q00613), HSF1_MOUSE (P38532), HSF24_SOLPE (P22335), HSF2_CHICK (P38530), HSF2_HUMAN (Q03933), HSF2_MOUSE (P38533), HSF30_SOLPE (P41152), HSF3_CHICK (P38531), HSF4_CANLF (Q1HGE8), HSF4_DANRE (Q5CZP2), HSF4_HUMAN (Q9ULV5), HSF4_MOUSE (Q9R0L1), HSF8_SOLLC (Q40152), HSF8_SOLPE (P41153), HSFA1_ORYSJ (Q84T61), HSFA2_ARATH (O80982), HSFA3_ARATH (Q8GYY1), HSFA3_ORYSJ (Q6H6Q7), HSFA5_ARATH (Q94BZ5), HSFA5_ORYSJ (Q6K6S5), HSFA8_ARATH (Q9S7U5), HSFA9_ARATH (Q9LVW2), HSFA9_ORYSJ (Q10PR4), HSFB1_ORYSJ (Q67TP9), HSFB3_ARATH (O22230), HSFB4_ARATH (Q9C635), HSFC1_ARATH (Q9LV52), HSF_CANAL (Q5AQ33), HSF_CRYNH (J9VHZ9), HSF_CRYNJ (Q5KMX8), HSF_DROME (P22813), HSF_KLULA (P22121), HSF_SCHPO (Q02953), HSF_XENLA (P41154), HSF_YEAST (P10961), MGA1_YEAST (P53050), PRR1_SCHPO (O14283), SFL1_CANAL (Q5A287), SFL1_YEAST (P20134), SFL2_CANAL (Q5AK51), SKN7_CANAL (Q5A4X5), SKN7_CHATD (G0SB31), SKN7_YEAST (P38889)» more
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| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
HFA4A_ARATH (O49403), HMS2_YEAST (P47175), HSF3_MOUSE (D0VYS2), HSF5_HUMAN (Q4G112), HSF5_MOUSE (Q5ND04), HSFB1_ARATH (Q96320), HSFX1_HUMAN (Q9UBD0), HSFY1_HUMAN (Q96LI6), HSF_ENCCU (Q8SS62), HSF_ENTBH (B7XIV9), HSF_VAIC1 (C4V6H6)» more |
| PDB [Detailed view] |
28 PDB
1FBQ; 1FBS; 1FBU; 1FYK; 1FYL; 1FYM; 1HKS; 1HKT; 2HTS; 2LDU; 3HSF; 3HTS; 5D5U; 5D5V; 5D5W; 5D5X; 5D8K; 5D8L; 5HDG; 5HDK; 5HDN; 6J6V; 6J6W; 7DCI; 7DCJ; 7DCS; 7DCT; 7DCU » more |