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Entry: PS00441
General information about the entry
Entry nameCHALCONE_SYNTH
Accession numberPS00441
Entry typePATTERN
DateMAY-1991 (CREATED); DEC-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00403
Associated ProRulePRU10023
Name and characterization of the entry
DescriptionChalcone and stilbene synthases active site.
PatternR-[LIVMFYS]-x-[LIVM]-x-[QHG]-x-G-C-[FYNA]-[GAPV]-G-[GAC]-[STAVK]-x- [LIVMF]-[RAL].
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 144 hits in 144 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 144 hits in 144 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 4
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 97.30 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 9,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
2PS_GERHY   (P48391), ACS2_RUTGR  (Q9FSC0), ACS3_RUTGR  (Q9FSC2), 
ACS4_RUTGR  (Q9FSC1), BBS_PHASS   (P53416), BCSA_BACSU  (P54157), 
CHS1_CAMSI  (P48386), CHS1_CASGL  (Q9ZRR8), CHS1_CICAR  (Q9SML4), 
CHS1_CITSI  (Q9XJ58), CHS1_DAUCA  (Q9ZS41), CHS1_GERHY  (P48390), 
CHS1_HORVU  (P26018), CHS1_IPOBA  (Q9MB33), CHS1_MAIZE  (P24824), 
CHS1_MEDSA  (P30073), CHS1_ORYSI  (A2ZEX7), CHS1_ORYSJ  (Q2R3A1), 
CHS1_PEA    (Q01286), CHS1_RUTGR  (Q9FSB9), CHS1_SECCE  (P53414), 
CHS1_SINAL  (P13416), CHS1_SOLLC  (P23418), CHS1_SORBI  (Q9XGX2), 
CHS1_SOYBN  (P24826), CHS1_TRISU  (P51083), CHS2_CAMSI  (P48387), 
CHS2_CITSI  (Q9XJ57), CHS2_DAUCA  (Q9ZS40), CHS2_HORVU  (Q96562), 
CHS2_IPOBA  (Q9MB41), CHS2_MAIZE  (P24825), CHS2_MEDSA  (P30074), 
CHS2_ORYSJ  (Q8H4L3), CHS2_PEA    (Q01287), CHS2_RUTGR  (Q9FSB8), 
CHS2_SECCE  (P53415), CHS2_SOLLC  (P23419), CHS2_SOLTU  (Q43188), 
CHS2_SORBI  (Q9SBL7), CHS2_SOYBN  (P17957), CHS2_TRISU  (P51084), 
CHS3_BROFI  (O23729), CHS3_CAMSI  (P48388), CHS3_GERHY  (P48392), 
CHS3_IPOBA  (Q9MB40), CHS3_MEDSA  (P51077), CHS3_PEA    (O23883), 
CHS3_RUTGR  (Q9FSB7), CHS3_SINAL  (P13417), CHS3_SORBI  (Q9SBL6), 
CHS3_SOYBN  (P19168), CHS3_TRISU  (P51085), CHS4_BROFI  (O23730), 
CHS4_IPOBA  (Q9MB39), CHS4_MEDSA  (P30075), CHS4_PEA    (O23882), 
CHS4_SORBI  (Q9SBL5), CHS4_TRISU  (P51086), CHS5_MEDSA  (P51078), 
CHS5_PEA    (O23884), CHS5_SORBI  (Q9SBL4), CHS5_SOYBN  (P48406), 
CHS5_TRISU  (P51087), CHS6_IPOBA  (Q9MB38), CHS6_MEDSA  (P51079), 
CHS6_PEA    (Q01288), CHS6_SORBI  (Q9SBL3), CHS6_SOYBN  (P30080), 
CHS6_TRISU  (P51088), CHS7_IPOBA  (Q9MB37), CHS7_MEDSA  (P51080), 
CHS7_PICMA  (Q9M5M0), CHS7_SORBI  (Q9XGX1), CHS7_SOYBN  (P30081), 
CHS8_BROFI  (O23731), CHS8_IPOBA  (Q9MB36), CHS8_MEDSA  (P30076), 
CHS9_DAUCA  (Q9SB26), CHS9_MEDSA  (P30077), CHSA_IPOCO  (P48393), 
CHSA_IPONI  (P48395), CHSA_IPOPL  (P48400), CHSA_IPOPU  (P48397), 
CHSA_IPOTF  (P48401), CHSA_IPOTR  (P48403), CHSA_PEA    (P51081), 
CHSA_PETHY  (P08894), CHSA_SOLTU  (Q41436), CHSB_IPOCO  (P48394), 
CHSB_IPONI  (P48396), CHSB_IPOPU  (P48398), CHSB_IPOTF  (P48402), 
CHSB_IPOTR  (P48404), CHSB_PEA    (P51082), CHSB_PETHY  (P22924), 
CHSB_SOLTU  (Q43163), CHSC_IPOPU  (P48399), CHSD_IPONI  (O22045), 
CHSD_PETHY  (P22925), CHSE_IPONI  (O22046), CHSE_IPOPU  (O22047), 
CHSF_PETHY  (P22926), CHSG_PETHY  (P22927), CHSJ_PETHY  (P22928), 
CHSY_ANTMA  (P06515), CHSY_ARAAL  (Q9SEP4), CHSY_ARATH  (P13114), 
CHSY_BETPN  (P51075), CHSY_CALCH  (P48385), CHSY_CARAN  (Q9SEP2), 
CHSY_CATRO  (Q9ZRS4), CHSY_CHRAE  (O04220), CHSY_DIACA  (P48389), 
CHSY_DIAMO  (Q9LKP7), CHSY_EQUAR  (Q9MBB1), CHSY_HYDMC  (O82144), 
CHSY_HYPAN  (Q9FUB7), CHSY_MATIN  (P17818), CHSY_ONOVI  (O22586), 
CHSY_PERAE  (Q9ZU06), CHSY_PERFR  (O04111), CHSY_PETCR  (P16107), 
CHSY_PHAVU  (P49440), CHSY_PINST  (O65872), CHSY_PINSY  (P30079), 
CHSY_PUEML  (P23569), CHSY_RAPSA  (O22652), CHSY_VIGUN  (P51089), 
CHSY_VITVI  (P51090), DPS1_PINST  (P48407), DPS2_PINST  (P48408), 
DPSS_PINSY  (Q02323), THS1_ARAHY  (P20178), THS1_VITVI  (P28343), 
THS2_ARAHY  (P20077), THS2_VITVI  (P51070), THS3_ARAHY  (P51069), 
THS3_VITVI  (P51071), THS4_VITVI  (A5AEM3), THS5_VITVI  (A5C9M2), 
THS7_VITVI  (A2ICC6), VPS_HUMLU   (O80400), VPS_PSINU   (Q9SLX9)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CUS_ORYSJ   (Q8LIL0), PKS10_MYCTU (P94995), PKS1_DICDI  (Q55E72), 
PKS37_DICDI (Q54FI3)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CHSY_FRAAN  (P51076), CHSY_MALDO  (P30078)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		1CGK; 1CGZ; 1U0U; 1U0V; 1U0W; 1XES; 1XET;

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