Entry: PS00448

General information about the entry
Entry name CLOS_CELLULOSOME_RPT
Accession number PS00448
Entry type PATTERN
Date MAY-1991 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00416
Name and characterization of the entry
DescriptionClostridium cellulosome enzymes repeated domain signature.
Pattern D-[LIVMFY]-[DNV]-x-[DNS]-x(2)-[LIVM]-[DN]-[SALM]-x-D-x(3)-[LIVMF]-x- [RKS]-x-[LIVMF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 50 hits in 28 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 50 hits in 28 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CELK_CLOTH  (A3DCH1), CELK_CLOTM  (P0C2S1), CIPA_CLOTH  (Q06851), 
CIPB_CLOTM  (Q01866), GUB_CLOTH   (A3DBX3), GUB_CLOTM   (Q84C00), 
GUN2_CLOJO  (P37701), GUNA_CLOCE  (P17901), GUNA_CLOTH  (A3DC29), 
GUNB_CLOC7  (P28621), GUNB_CLOTH  (P04956), GUNC_CLOCE  (P37699), 
GUND_CLOCE  (P25472), GUND_CLOTH  (A3DDN1), GUND_CLOTM  (P0C2S4), 
GUNE_CLOTM  (P10477), GUNF_CLOCE  (P37698), GUNF_CLOTH  (P26224), 
GUNG_CLOCE  (P37700), GUNG_CLOTH  (Q05332), GUNH_CLOTH  (P16218), 
GUNS_CLOTH  (A3DH67), GUNS_CLOTM  (P0C2S5), GUNX_CLOTM  (P15329), 
XG74_CLOTH  (A3DFA0), XG74_CLOTM  (Q70DK5), XYNY_CLOTM  (P51584), 
XYNZ_CLOTH  (P10478)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
GUNA_CLOTM  (P0C2S2)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1DAQ; 1DAV; 1OHZ; 2B59; 2CCL; 2VN5; 2VN6; 3KCP; 4FL4;

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