Entry: PS00451

General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.

Total number of hits 46 in 46 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 95.65 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
44 sequences

ABR17_PEA   (Q06931), ABR18_PEA   (Q06930), ALL1_APIGR  (P49372), 
ALL2_APIGR  (P92918), BEV1A_BETPN (P15494), BEV1B_BETPN (P45431), 
BEV1C_BETPN (P43176), BEV1D_BETPN (P43177), BEV1E_BETPN (P43178), 
BEV1F_BETPN (P43179), BEV1G_BETPN (P43180), BEV1J_BETPN (P43183), 
BEV1K_BETPN (P43184), BEV1L_BETPN (P43185), BEV1M_BETPN (P43186), 
DAU1_DAUCA  (O04298), DRR1_PEA    (P13239), DRR3_PEA    (P14710), 
DRR4_PEA    (P27047), L18A_LUPLU  (P52778), L18B_LUPLU  (P52779), 
MAL11_MALDO (P43211), MAL12_MALDO (Q40280), MPAC1_CARBE (P38949), 
MPAC1_CORAV (Q08407), MPAC2_CARBE (P38950), MPAG1_ALNGL (P38948), 
PR101_MEDTR (P93333), PR11_PETCR  (P19417), PR13_PETCR  (P19418), 
PR1_ASPOF   (Q05736), PR1_MEDSA   (Q43560), PR1_PHAVU   (P25985), 
PR2_PETCR   (P27538), PR2_PHAVU   (P25986), PRS1_SOLTU  (P17641), 
PRS2_SOLTU  (P17642), PRU1_PRUAR  (O50001), PRU1_PRUAV  (O24248), 
PYRC1_PYRCO (O65200), RAP_TAROF   (O49065), RNS1_PANGI  (P80889), 
RNS2_PANGI  (P80890), SAM22_SOYBN (P26987)
» More

False negative sequences
4 sequences

FRAA_FRAAN  (Q5ULZ4), KIRO_ACTDE  (P85524), NOD13_MEDTR (P93330), 
» More

'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900), PL1_LUPLU   (P83363), PL2_LUPLU   (P83364), 
PL3_LUPLU   (P83365), PL4_LUPLU   (P83366), PL5_LUPLU   (P83367), 
PL6_LUPLU   (P83368), PRP_CAPAA   (P86077), QUA1_QUEAL  (P85126)
» More

False positive sequences
2 sequences

NEP1_NEPDI  (P69476), PLB1_MONDO  (Q06HQ7)

[Detailed view]
32 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4MNS; 4QIP
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission