To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS00451

General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED; 01-DEC-2004 DATA UPDATE; 25-OCT-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_10 which contains 556'006 sequence entries.

Total number of hits 46 in 46 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 95.65 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
44 sequences

ABR17_PEA   (Q06931    ), ABR18_PEA   (Q06930    ), ALL1_APIGR  (P49372    ), 
ALL2_APIGR  (P92918    ), BEV1A_BETPN (P15494    ), BEV1B_BETPN (P45431    ), 
BEV1C_BETPN (P43176    ), BEV1D_BETPN (P43177    ), BEV1E_BETPN (P43178    ), 
BEV1F_BETPN (P43179    ), BEV1G_BETPN (P43180    ), BEV1J_BETPN (P43183    ), 
BEV1K_BETPN (P43184    ), BEV1L_BETPN (P43185    ), BEV1M_BETPN (P43186    ), 
DAU1_DAUCA  (O04298    ), DRR1_PEA    (P13239    ), DRR3_PEA    (P14710    ), 
DRR4_PEA    (P27047    ), L18A_LUPLU  (P52778    ), L18B_LUPLU  (P52779    ), 
MAL11_MALDO (P43211    ), MAL12_MALDO (Q40280    ), MPAC1_CARBE (P38949    ), 
MPAC1_CORAV (Q08407    ), MPAC2_CARBE (P38950    ), MPAG1_ALNGL (P38948    ), 
PR101_MEDTR (P93333    ), PR11_PETCR  (P19417    ), PR13_PETCR  (P19418    ), 
PR1_ASPOF   (Q05736    ), PR1_MEDSA   (Q43560    ), PR1_PHAVU   (P25985    ), 
PR2_PETCR   (P27538    ), PR2_PHAVU   (P25986    ), PRS1_SOLTU  (P17641    ), 
PRS2_SOLTU  (P17642    ), PRU1_PRUAR  (O50001    ), PRU1_PRUAV  (O24248    ), 
PYRC1_PYRCO (O65200    ), RAP_TAROF   (O49065    ), RNS1_PANGI  (P80889    ), 
RNS2_PANGI  (P80890    ), SAM22_SOYBN (P26987    )
» more

False negative sequences
4 sequences

FRAA_FRAAN  (Q5ULZ4    ), KIRO_ACTDE  (P85524    ), NOD13_MEDTR (P93330    ), 
PHBP_MEDTR  (G7J032    )
» more

'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900    ), PL1_LUPLU   (P83363    ), PL2_LUPLU   (P83364    ), 
PL3_LUPLU   (P83365    ), PL4_LUPLU   (P83366    ), PL5_LUPLU   (P83367    ), 
PL6_LUPLU   (P83368    ), PRP_CAPAA   (P86077    ), QUA1_QUEAL  (P85126    )
» more

False positive sequences
2 sequences

NEP1_NEPDI  (P69476    ), PLB1_MONDO  (Q06HQ7    )

[Detailed view]
36 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4MNS; 4QIP; 4RYV; 4Y31; 4Z3L; 5C9Y
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission