Entry: PS00451

General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)-
[KT]-x(4)-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 95.65 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
44 sequences

ABR17_PEA   (Q06931    ), ABR18_PEA   (Q06930    ), ALL1_APIGR  (P49372    ), 
ALL2_APIGR  (P92918    ), BEV1A_BETPN (P15494    ), BEV1B_BETPN (P45431    ), 
BEV1C_BETPN (P43176    ), BEV1D_BETPN (P43177    ), BEV1E_BETPN (P43178    ), 
BEV1F_BETPN (P43179    ), BEV1G_BETPN (P43180    ), BEV1J_BETPN (P43183    ), 
BEV1K_BETPN (P43184    ), BEV1L_BETPN (P43185    ), BEV1M_BETPN (P43186    ), 
DAU1_DAUCA  (O04298    ), DRR1_PEA    (P13239    ), DRR3_PEA    (P14710    ), 
DRR4_PEA    (P27047    ), L18A_LUPLU  (P52778    ), L18B_LUPLU  (P52779    ), 
MAL11_MALDO (P43211    ), MAL12_MALDO (Q40280    ), MPAC1_CARBE (P38949    ), 
MPAC1_CORAV (Q08407    ), MPAC2_CARBE (P38950    ), MPAG1_ALNGL (P38948    ), 
PR101_MEDTR (P93333    ), PR11_PETCR  (P19417    ), PR13_PETCR  (P19418    ), 
PR1_ASPOF   (Q05736    ), PR1_MEDSA   (Q43560    ), PR1_PHAVU   (P25985    ), 
PR2_PETCR   (P27538    ), PR2_PHAVU   (P25986    ), PRS1_SOLTU  (P17641    ), 
PRS2_SOLTU  (P17642    ), PRU1_PRUAR  (O50001    ), PRU1_PRUAV  (O24248    ), 
PYRC1_PYRCO (O65200    ), RAP_TAROF   (O49065    ), RNS1_PANGI  (P80889    ), 
RNS2_PANGI  (P80890    ), SAM22_SOYBN (P26987    )
» more

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

FRAA_FRAAN  (Q5ULZ4    ), KIRO_ACTDE  (P85524    ), NOD13_MEDTR (P93330    ), 
PHBP_MEDTR  (G7J032    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900    ), PL1_LUPLU   (P83363    ), PL2_LUPLU   (P83364    ), 
PL3_LUPLU   (P83365    ), PL4_LUPLU   (P83366    ), PL5_LUPLU   (P83367    ), 
PL6_LUPLU   (P83368    ), PRP_CAPAA   (P86077    ), QUA1_QUEAL  (P85126    )
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

NEP1_NEPDI  (P69476    ), PLB1_MONDO  (Q06HQ7    )

		
PDB
[Detailed view]
36 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4MNS; 4QIP; 4RYV; 4Y31; 4Z3L; 5C9Y
» more

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