Entry: PS00451

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General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)-
[KT]-x(4)-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 95.65 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
44 sequences

ABR17_PEA   (Q06931), ABR18_PEA   (Q06930), ALL1_APIGR  (P49372), 
ALL2_APIGR  (P92918), BEV1A_BETPN (P15494), BEV1B_BETPN (P45431), 
BEV1C_BETPN (P43176), BEV1D_BETPN (P43177), BEV1E_BETPN (P43178), 
BEV1F_BETPN (P43179), BEV1G_BETPN (P43180), BEV1J_BETPN (P43183), 
BEV1K_BETPN (P43184), BEV1L_BETPN (P43185), BEV1M_BETPN (P43186), 
DAU1_DAUCA  (O04298), DRR1_PEA    (P13239), DRR3_PEA    (P14710), 
DRR4_PEA    (P27047), L18A_LUPLU  (P52778), L18B_LUPLU  (P52779), 
MAL11_MALDO (P43211), MAL12_MALDO (Q40280), MPAC1_CARBE (P38949), 
MPAC1_CORAV (Q08407), MPAC2_CARBE (P38950), MPAG1_ALNGL (P38948), 
PR101_MEDTR (P93333), PR11_PETCR  (P19417), PR13_PETCR  (P19418), 
PR1_ASPOF   (Q05736), PR1_MEDSA   (Q43560), PR1_PHAVU   (P25985), 
PR2_PETCR   (P27538), PR2_PHAVU   (P25986), PRS1_SOLTU  (P17641), 
PRS2_SOLTU  (P17642), PRU1_PRUAR  (O50001), PRU1_PRUAV  (O24248), 
PYRC1_PYRCO (O65200), RAP_TAROF   (O49065), RNS1_PANGI  (P80889), 
RNS2_PANGI  (P80890), SAM22_SOYBN (P26987)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

FRAA_FRAAN  (Q5ULZ4), KIRO_ACTDE  (P85524), NOD13_MEDTR (P93330), 
PHBP_MEDTR  (G7J032)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900), PL1_LUPLU   (P83363), PL2_LUPLU   (P83364), 
PL3_LUPLU   (P83365), PL4_LUPLU   (P83366), PL5_LUPLU   (P83367), 
PL6_LUPLU   (P83368), PRP_CAPAA   (P86077), QUA1_QUEAL  (P85126)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

NEP1_NEPDI  (P69476), PLB1_MONDO  (Q06HQ7)

		
PDB
[Detailed view]
30 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD
» More

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