Entry: PS00451

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General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)-
[KT]-x(4)-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 45 in 45 different sequences
Number of true positive hits 43 in 43 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 95.56 %
Recall (true positives / (true positives + false negatives)) 95.56 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

ABR17_PEA   (Q06931), ABR18_PEA   (Q06930), ALL1_APIGR  (P49372), 
ALL2_APIGR  (P92918), BEV1A_BETPN (P15494), BEV1B_BETPN (P45431), 
BEV1C_BETPN (P43176), BEV1D_BETPN (P43177), BEV1E_BETPN (P43178), 
BEV1F_BETPN (P43179), BEV1G_BETPN (P43180), BEV1J_BETPN (P43183), 
BEV1K_BETPN (P43184), BEV1L_BETPN (P43185), BEV1M_BETPN (P43186), 
DAU1_DAUCA  (O04298), DRR1_PEA    (P13239), DRR3_PEA    (P14710), 
DRR4_PEA    (P27047), L18A_LUPLU  (P52778), L18B_LUPLU  (P52779), 
MAL11_MALDO (P43211), MAL12_MALDO (Q40280), MPAC1_CARBE (P38949), 
MPAC1_CORAV (Q08407), MPAC2_CARBE (P38950), MPAG1_ALNGL (P38948), 
PR11_PETCR  (P19417), PR13_PETCR  (P19418), PR1_ASPOF   (Q05736), 
PR1_MEDSA   (Q43560), PR1_PHAVU   (P25985), PR2_PETCR   (P27538), 
PR2_PHAVU   (P25986), PRS1_SOLTU  (P17641), PRS2_SOLTU  (P17642), 
PRU1_PRUAR  (O50001), PRU1_PRUAV  (O24248), PYRC1_PYRCO (O65200), 
RAP_TAROF   (O49065), RNS1_PANGI  (P80889), RNS2_PANGI  (P80890), 
SAM22_SOYBN (P26987)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

FRAA_FRAAN  (Q5ULZ4), KIRO_ACTDE  (P85524)

		
UniProtKB/Swiss-Prot
'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900), PL1_LUPLU   (P83363), PL2_LUPLU   (P83364), 
PL3_LUPLU   (P83365), PL4_LUPLU   (P83366), PL5_LUPLU   (P83367), 
PL6_LUPLU   (P83368), PRP_CAPAA   (P86077), QUA1_QUEAL  (P85126)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

NEP1_NEPDI  (P69476), PLB1_MONDO  (Q06HQ7)

		
PDB
[Detailed view]
30 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD
» More

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