Entry: PS00461

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General information about the entry

Entry name [info] 6PGD
Accession [info] PS00461
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00390

Name and characterization of the entry

Description [info] 6-phosphogluconate dehydrogenase signature.
Pattern [info]
[LIVM]-x-[DG]-x(2)-[GAEHS]-[NQSD]-[KS]-G-[TE]-G-x-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 56 in 56 different sequences
Number of true positive hits 56 in 56 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
56 sequences

6PGD1_YEAST (P38720), 6PGD2_YEAST (P53319), 6PGD9_ECOLX (P37754), 
6PGDH_BACSU (P12013), 6PGD_AGGAC  (P70718), 6PGD_BACLI  (P52207), 
6PGD_BACSU  (P80859), 6PGD_BUCAI  (P57208), 6PGD_BUCAP  (Q9ZHD9), 
6PGD_BUCBP  (Q89AX5), 6PGD_CAEEL  (Q17761), 6PGD_CANAX  (O13287), 
6PGD_CERCA  (P41570), 6PGD_CHLMU  (Q9PKX7), 6PGD_CHLPN  (Q9Z8I3), 
6PGD_CHLTR  (O84066), 6PGD_CITAM  (P41581), 6PGD_CITFR  (P41583), 
6PGD_CITKO  (P41582), 6PGD_CUNEL  (O60037), 6PGD_DICDI  (Q8TA03), 
6PGD_DROME  (P41572), 6PGD_DROSI  (P41573), 6PGD_ECOLI  (P00350), 
6PGD_ESCVU  (P41574), 6PGD_HAEDU  (Q7VMX4), 6PGD_HAEIN  (P43774), 
6PGD_HUMAN  (P52209), 6PGD_KLEPN  (P41576), 6PGD_LACLA  (Q9CHU6), 
6PGD_LACLM  (P96789), 6PGD_MOUSE  (Q9DCD0), 6PGD_PIG    (P14332), 
6PGD_RAOPL  (P41575), 6PGD_RAOTE  (P41577), 6PGD_RAT    (P85968), 
6PGD_SALTY  (P14062), 6PGD_SCHPO  (P78812), 6PGD_SHEEP  (P00349), 
6PGD_SHIBO  (P41578), 6PGD_SHIDY  (P41579), 6PGD_SHIFL  (P37756), 
6PGD_SHISO  (P41580), 6PGD_STAAC  (Q5HFR2), 6PGD_STAAM  (Q931R3), 
6PGD_STAAN  (P63334), 6PGD_STAAR  (Q6GGI7), 6PGD_STAAS  (Q6G954), 
6PGD_STAAW  (P63335), 6PGD_STAEQ  (Q5HP42), 6PGD_STAES  (Q8CP47), 
6PGD_SYNE7  (P21577), 6PGD_SYNY3  (P52208), 6PGD_TREPA  (O83351), 
6PGD_TRYBB  (P31072), YQEC_BACSU  (P54448)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

6GPD3_ARATH (Q9FWA3), 6PGD1_ARATH (Q9SH69), 6PGD1_ORYSJ (Q9LI00), 
6PGD1_SPIOL (Q94KU1), 6PGD2_ARATH (Q9FFR3), 6PGD2_ORYSJ (Q2R480), 
6PGD2_SPIOL (Q94KU2)
» More

PDB
[Detailed view]
17 PDB

1PGJ; 1PGN; 1PGO; 1PGP; 1PGQ; 2IYO; 2IYP; 2IZ0; 2IZ1; 2JKV; 2P4Q; 2PGD; 2ZYA; 2ZYD; 3FWN; 4GWG; 4GWK
» More

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