PROSITE entry PS00461
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General information about the entry
Entry name [info] | 6PGD |
Accession [info] | PS00461 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00390 |
Name and characterization of the entry
Description [info] | 6-phosphogluconate dehydrogenase signature. |
Pattern [info] |
[LIVM]-x-[DG]-x(2)-[GAEHS]-[NQSD]-[KS]-G-[TE]-G-x-W. |
Numerical results [info]
Total number of hits | 56 in 56 different sequences |
Number of true positive hits | 56 in 56 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 8 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 87.50 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
56 sequences
6PGD1_YEAST (P38720), 6PGD2_YEAST (P53319), 6PGD9_ECOLX (P37754), 6PGDH_BACSU (P12013), 6PGD_AGGAC (P70718), 6PGD_BACLI (P52207), 6PGD_BACSU (P80859), 6PGD_BUCAI (P57208), 6PGD_BUCAP (Q9ZHD9), 6PGD_BUCBP (Q89AX5), 6PGD_CAEEL (Q17761), 6PGD_CANAX (O13287), 6PGD_CERCA (P41570), 6PGD_CHLMU (Q9PKX7), 6PGD_CHLPN (Q9Z8I3), 6PGD_CHLTR (O84066), 6PGD_CITAM (P41581), 6PGD_CITFR (P41583), 6PGD_CITKO (P41582), 6PGD_CUNEL (O60037), 6PGD_DICDI (Q8TA03), 6PGD_DROME (P41572), 6PGD_DROSI (P41573), 6PGD_ECOLI (P00350), 6PGD_HAEDU (Q7VMX4), 6PGD_HAEIN (P43774), 6PGD_HUMAN (P52209), 6PGD_KLEPN (P41576), 6PGD_LACLA (Q9CHU6), 6PGD_LACLM (P96789), 6PGD_MOUSE (Q9DCD0), 6PGD_PIG(P14332), 6PGD_PSEVU (P41574), 6PGD_RAOPL (P41575), 6PGD_RAOTE (P41577), 6PGD_RAT(P85968), 6PGD_SALTY (P14062), 6PGD_SCHPO (P78812), 6PGD_SHEEP (P00349), 6PGD_SHIBO (P41578), 6PGD_SHIDY (P41579), 6PGD_SHIFL (P37756), 6PGD_SHISO (P41580), 6PGD_STAAC (Q5HFR2), 6PGD_STAAM (Q931R3), 6PGD_STAAN (P63334), 6PGD_STAAR (Q6GGI7), 6PGD_STAAS (Q6G954), 6PGD_STAAW (P63335), 6PGD_STAEQ (Q5HP42), 6PGD_STAES (Q8CP47), 6PGD_SYNE7 (P21577), 6PGD_SYNY3 (P52208), 6PGD_TREPA (O83351), 6PGD_TRYBB (P31072), YQEC_BACSU (P54448)» more
|
UniProtKB/Swiss-Prot False negative sequences |
8 sequences
6PGD1_ARATH (Q9SH69), 6PGD1_ORYSJ (Q9LI00), 6PGD1_SPIOL (Q94KU1), 6PGD2_ARATH (Q9FWA3), 6PGD2_ORYSJ (Q2R480), 6PGD2_SPIOL (Q94KU2), 6PGD3_ARATH (Q9FFR3), 6PGDH_GLUOX (G5EBD7)» more |
PDB [Detailed view] |
18 PDB
1PGJ; 1PGN; 1PGO; 1PGP; 1PGQ; 2IYO; 2IYP; 2IZ0; 2IZ1; 2JKV; 2P4Q; 2PGD; 2ZYA; 2ZYD; 3FWN; 4GWG; 4GWK; 5UQ9 » more |