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Entry: PS00462
General information about the entry
Entry nameG_GLU_TRANSPEPTIDASE
Accession numberPS00462
Entry typePATTERN
DateMAY-1991 (CREATED); NOV-1997 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00404
Name and characterization of the entry
DescriptionGamma-glutamyltranspeptidase signature.
PatternT-[STA]-H-x-[ST]-[LIVMA]-x(4)-G-[SN]-x-V-[STA]-x-T-x-T-[LIVM]-[NE]- x(1,2)-[FY]-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 20 hits in 20 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 20 hits in 20 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 12
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 62.50 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
ECM38_YEAST (Q05902), GGT1_HUMAN  (P19440), GGT1_MOUSE  (Q60928), 
GGT1_PIG    (P20735), GGT1_RAT    (P07314), GGT2_HUMAN  (P36268), 
GGT3_HUMAN  (A6NGU5), GGT5_HUMAN  (P36269), GGT5_MOUSE  (Q9Z2A9), 
GGT5_RAT    (Q9QWE9), GGTL1_HUMAN (Q9BX51), GGTL2_HUMAN (Q14390), 
GGTL3_HUMAN (B5MD39), GGT_BACNA   (P63186), GGT_BACSU   (P54422), 
GGT_ECOLI   (P18956), GGT_PSEAE   (Q9I406), GGT_PSEUA   (P36267), 
PAC1_PSES3  (P15557), PAC1_PSESV  (Q05053)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GGT1_SCHPO  (Q9US04), GGT2_SCHPO  (O14194), GGT6_BOVIN  (A7YWM1), 
GGT6_HUMAN  (Q6P531), GGT6_MOUSE  (Q6PDE7), GGT6_RAT    (Q6IE08), 
GGT7_BOVIN  (Q0V8L2), GGT7_HUMAN  (Q9UJ14), GGT7_MOUSE  (Q99JP7), 
GGT7_RAT    (Q99MZ4), GGT_SYNY3   (P74181), YWRD_BACSU  (O05218)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		2DBU; 2DBW; 2DBX; 2DG5; 2E0X; 2E0Y; 2V36; 2Z8I; 2Z8J; 2Z8K; 3A75;

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