Entry: PS00462

Forthcoming changes to the profile format
General information about the entry

Entry name [info] G_GLU_TRANSPEPTIDASE
Accession [info] PS00462
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); NOV-1997 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00404

Name and characterization of the entry

Description [info] Gamma-glutamyltranspeptidase signature.
Pattern [info]
T-[STA]-H-x-[ST]-[LIVMA]-x(4)-G-[SN]-x-V-[STA]-x-T-x-T-[LIVM]-[NE]-
x(1,2)-[FY]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 55.56 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

ECM38_YEAST (Q05902), GGT1_HUMAN  (P19440), GGT1_MOUSE  (Q60928), 
GGT1_PIG    (P20735), GGT1_RAT    (P07314), GGT2_HUMAN  (P36268), 
GGT3_HUMAN  (A6NGU5), GGT5_HUMAN  (P36269), GGT5_MOUSE  (Q9Z2A9), 
GGT5_RAT    (Q9QWE9), GGTL1_HUMAN (Q9BX51), GGTL2_HUMAN (Q14390), 
GGTL3_HUMAN (B5MD39), GGT_BACNA   (P63186), GGT_BACSU   (P54422), 
GGT_ECOLI   (P18956), GGT_PSEAE   (Q9I406), GGT_PSEUA   (P36267), 
PAC1_PSES3  (P15557), PAC1_PSESV  (Q05053)
» More

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

GAGT1_ARATH (Q8VYW6), GAGT2_ARATH (Q680I5), GAGT3_ARATH (Q9M0G0), 
GAGT4_ARATH (Q9CAR5), GGT1_SCHPO  (Q9US04), GGT2_SCHPO  (O14194), 
GGT6_BOVIN  (A7YWM1), GGT6_HUMAN  (Q6P531), GGT6_MOUSE  (Q6PDE7), 
GGT6_RAT    (Q6IE08), GGT7_BOVIN  (Q0V8L2), GGT7_HUMAN  (Q9UJ14), 
GGT7_MOUSE  (Q99JP7), GGT7_RAT    (Q99MZ4), GGT_SYNY3   (P74181), 
YWRD_BACSU  (O05218)
» More

PDB
[Detailed view]
16 PDB

2DBU; 2DBW; 2DBX; 2DG5; 2E0X; 2E0Y; 2V36; 2Z8I; 2Z8J; 2Z8K; 3A75; 3WHQ; 3WHR; 3WHS; 4GDX; 4GG2
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission