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Entry: PS00508

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General information about the entry

Entry name [info] NI_HGENASE_L_2
Accession [info] PS00508
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); JAN-2008 (DATA UPDATE); DEC-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00400

Name and characterization of the entry

Description [info] Nickel-dependent hydrogenases large subunit signature 2.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_01 which contains 547'357 sequence entries.

Total number of hits 32 in 32 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 84.21 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] nickel at position 4
Site [info] nickel at position 7
Version [info] 1

Cross-references [info]

True positive sequences
32 sequences

FRHA_METBF  (P80489), FRHA_METJA  (Q60338), FRHA_METTH  (P19496), 
FRHA_METVO  (Q00390), HOXH_CUPNH  (P22320), HYD1A_PYRFU (E7FI44), 
HYD2A_PYRFU (E7FHC4), MBHL_ALCHY  (P33374), MBHL_AZOCH  (P18191), 
MBHL_AZOVI  (P21949), MBHL_BRADU  (P12636), MBHL_CITFR  (Q46046), 
MBHL_CUPNH  (P31891), MBHL_ECOLI  (P0ACD8), MBHL_OLICO  (O33406), 
MBHL_RHILV  (P18636), MBHL_RHOCA  (P15284), MBHL_RUBGE  (P17632), 
MVHA_METTH  (Q50783), MVHA_METTM  (P60227), PHNL_DESFR  (P18188), 
PHNL_DESGI  (P12944), PHNL_DESVM  (P21852), PHSL_DESBA  (P13065), 
» More

False negative sequences
6 sequences

VHCA_ARCPA  (P84625), VHUA_METJA  (Q58592), VHUA_METVO  (Q00407), 
VHUU_METJA  (P81335), VHUU_METMP  (P0C1V5), VHUU_METVO  (Q00410)
» More

'Partial' sequences
2 sequences

HOXH_RHOOP  (P22661), PHSL_DESNO  (P13066)

[Detailed view]
27 PDB

1FRF; 1FRV; 1H2A; 1H2R; 1UBH; 1UBJ; 1UBK; 1UBL; 1UBM; 1UBO; 1UBR; 1UBT; 1UBU; 1YQ9; 1YQW; 1YRQ; 2FRV; 3CUR; 3H3X; 3RGW; 3UQY; 3USC; 3USE; 4GD3; 4IUB; 4IUC; 4UPE
» More

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