Entry: PS00512

General information about the entry

Entry name [info] ALPHA_GALACTOSIDASE
Accession [info] PS00512
Entry type [info] PATTERN
Date [info] JUN-1991 (CREATED); DEC-2004 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00443

Name and characterization of the entry

Description [info] Alpha-galactosidase signature.
Pattern [info]
G-[LIVMFY]-x(2)-[LIVMFY]-x-[LIVM]-D-[DF]-x(1,2)-W-x(3,7)-[RV]-[DNSF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 21
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 68.66 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

AGAL1_ARATH (Q9FT97), AGAL1_PEDPE (P43467), AGAL2_ARATH (Q8RX86), 
AGAL2_HYPJE (Q92457), AGAL2_PEDPE (P43469), AGAL3_ARATH (Q8VXZ7), 
AGALA_ASPNC (A2QL72), AGALA_ASPNG (P28351), AGALB_ASPCL (A1C5D3), 
AGALB_ASPFC (B0Y224), AGALB_ASPFN (B8N306), AGALB_ASPFU (Q4WE86), 
AGALB_ASPNC (A2QEJ9), AGALB_ASPNG (Q9Y865), AGALB_ASPOR (Q2UJ97), 
AGALB_EMENI (Q5AVQ6), AGALB_NEOFI (A1D0A3), AGALB_PENSI (O94221), 
AGALB_TALEM (A7XZT2), AGALC_ASPFN (B8NWY6), AGALC_ASPNG (Q9UUZ4), 
AGALC_ASPOR (Q2TW69), AGAL_CELJU  (B3PGJ1), AGAL_COFAR  (Q42656), 
AGAL_CYATE  (P14749), AGAL_HUMAN  (P06280), AGAL_MOUSE  (P51569), 
AGAL_ORYSJ  (Q9FXT4), AGAL_SCHPO  (Q9URZ0), AGAL_STRMU  (P27756), 
IMD_ARTGO   (Q44052), MEL1_YEASX  (P04824), MEL2_YEASX  (P41945), 
MEL5_YEASX  (P41946), MEL6_YEASX  (P41947), MEL_LACCI   (Q99172), 
MEL_SACMI   (Q11129), MEL_SACPA   (Q09187), MEL_TORDE   (Q9UVD6), 
MEL_ZYGMR   (Q9P4V4), NAGAB_BOVIN (Q58DH9), NAGAB_CHICK (Q90744), 
NAGAB_HUMAN (P17050), NAGAB_MOUSE (Q9QWR8), NAGAB_RAT   (Q66H12), 
RAFA_ECOLX  (P16551)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

AGAL3_HYPJE (Q92451), AGAL8_EMENI (C8VJZ7), AGALA_ASPCL (A1CBW8), 
AGALA_ASPFN (B8MWJ5), AGALA_ASPFU (Q4WVZ3), AGALA_ASPOR (Q2UT06), 
AGALA_ASPTN (Q0CPK2), AGALA_NEOFI (A1DDD8), AGALC_ASPTN (Q0CVH2), 
AGALC_EMENI (Q5AU92), AGALD_ASPFC (B0YEK2), AGALD_ASPFN (B8N7Z0), 
AGALD_ASPFU (A4DA70), AGALD_ASPNC (A2R2S6), AGALD_ASPOR (Q2UI87), 
AGALD_ASPTN (Q0CVX4), AGALD_EMENI (Q5AX28), AGALD_NEOFI (A1D9S3), 
AGALG_ASPTN (Q0CEF5), AGALG_EMENI (Q5ARP5), MEL_SACCA   (Q03647)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

AGAL_CAPAA  (P86073), NAGAB_BOSIN (P83127)

		
PDB
[Detailed view]
30 PDB

1KTB; 1KTC; 1R46; 1R47; 1UAS; 3GXN; 3GXP; 3GXT; 3H53; 3H54; 3H55; 3HG2; 3HG3; 3HG4; 3HG5; 3IGU; 3LRK; 3LRL; 3LRM; 3LX9; 3LXA; 3LXB; 3LXC; 3S5Y; 3S5Z; 3TV8; 4DO4; 4DO5; 4DO6; 4NXS
» More

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