Entry: PS00512

General information about the entry
Entry name ALPHA_GALACTOSIDASE
Accession number PS00512
Entry type PATTERN
Date JUN-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00443
Name and characterization of the entry
DescriptionAlpha-galactosidase signature.
Pattern G-[LIVMFY]-x(2)-[LIVMFY]-x-[LIVM]-D-[DF]-x(1,2)-W-x(3,7)-[RV]-[DNSF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 43 hits in 43 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 43 hits in 43 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 21
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 67.19 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AGAL1_PEDPE (P43467), AGAL2_HYPJE (Q92457), AGAL2_PEDPE (P43469), 
AGALA_ASPNC (A2QL72), AGALA_ASPNG (P28351), AGALB_ASPCL (A1C5D3), 
AGALB_ASPFC (B0Y224), AGALB_ASPFN (B8N306), AGALB_ASPFU (Q4WE86), 
AGALB_ASPNC (A2QEJ9), AGALB_ASPNG (Q9Y865), AGALB_ASPOR (Q2UJ97), 
AGALB_EMENI (Q5AVQ6), AGALB_NEOFI (A1D0A3), AGALB_PENSI (O94221), 
AGALB_TALEM (A7XZT2), AGALC_ASPFN (B8NWY6), AGALC_ASPNG (Q9UUZ4), 
AGALC_ASPOR (Q2TW69), AGAL_CELJU  (B3PGJ1), AGAL_COFAR  (Q42656), 
AGAL_CYATE  (P14749), AGAL_HUMAN  (P06280), AGAL_MOUSE  (P51569), 
AGAL_ORYSJ  (Q9FXT4), AGAL_SCHPO  (Q9URZ0), AGAL_STRMU  (P27756), 
IMD_ARTGO   (Q44052), MEL1_YEASX  (P04824), MEL2_YEASX  (P41945), 
MEL5_YEASX  (P41946), MEL6_YEASX  (P41947), MEL_SACMI   (Q11129), 
MEL_SACPA   (Q09187), MEL_TORDE   (Q9UVD6), MEL_ZYGCI   (Q99172), 
MEL_ZYGMR   (Q9P4V4), NAGAB_BOVIN (Q58DH9), NAGAB_CHICK (Q90744), 
NAGAB_HUMAN (P17050), NAGAB_MOUSE (Q9QWR8), NAGAB_RAT   (Q66H12), 
RAFA_ECOLX  (P16551)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AGAL3_HYPJE (Q92451), AGAL8_EMENI (C8VJZ7), AGALA_ASPCL (A1CBW8), 
AGALA_ASPFN (B8MWJ5), AGALA_ASPFU (Q4WVZ3), AGALA_ASPOR (Q2UT06), 
AGALA_ASPTN (Q0CPK2), AGALA_NEOFI (A1DDD8), AGALC_ASPTN (Q0CVH2), 
AGALC_EMENI (Q5AU92), AGALD_ASPFC (B0YEK2), AGALD_ASPFN (B8N7Z0), 
AGALD_ASPFU (A4DA70), AGALD_ASPNC (A2R2S6), AGALD_ASPOR (Q2UI87), 
AGALD_ASPTN (Q0CVX4), AGALD_EMENI (Q5AX28), AGALD_NEOFI (A1D9S3), 
AGALG_ASPTN (Q0CEF5), AGALG_EMENI (Q5ARP5), MEL_SACPS   (Q03647)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
AGAL_CAPAA  (P86073), NAGAB_BOSIN (P83127)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1KTB; 1KTC; 1R46; 1R47; 1UAS; 3GXN; 3GXP; 3GXT; 3H53; 3H54; 3H55; 3HG2; 3HG3; 3HG4; 3HG5; 3IGU; 3LRK; 3LRL; 3LRM; 3LX9; 3LXA; 3LXB; 3LXC; 3S5Y; 3S5Z; 3TV8; 4DO4; 4DO5; 4DO6;

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